RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 ANAPC15P60006 121 aa22.59■■□□□ 1.21
NECTIN3-211ENST00000493615 GTF2IP78347 998 aa22.59■■□□□ 1.21
NECTIN3-211ENST00000493615 MIGA1Q8NAN2 632 aa22.59■■□□□ 1.21
NECTIN3-211ENST00000493615 KCNB2Q92953 911 aa22.59■■□□□ 1.21
NECTIN3-211ENST00000493615 DBNDD1Q9H9R9 158 aa22.59■■□□□ 1.21
NECTIN3-211ENST00000493615 TAF6LQ9Y6J9 622 aa22.59■■□□□ 1.21
NECTIN3-211ENST00000493615 AOC3Q16853 763 aa22.58■■□□□ 1.21
NECTIN3-211ENST00000493615 NAA16Q6N069 864 aaPredicted RBP22.58■■□□□ 1.21
NECTIN3-211ENST00000493615 DDRGK1Q96HY6 314 aa22.58■■□□□ 1.21
NECTIN3-211ENST00000493615 STRBPQ96SI9 672 aaKnown RBP22.58■■□□□ 1.21
NECTIN3-211ENST00000493615 KCNQ5Q9NR82 932 aa22.58■■□□□ 1.21
NECTIN3-211ENST00000493615 FAM205AQ6ZU69 1335 aa22.58■■□□□ 1.21
NECTIN3-211ENST00000493615 CHD4Q14839 1912 aa22.58■■□□□ 1.2
NECTIN3-211ENST00000493615 SLC27A2O14975 620 aa22.58■■□□□ 1.2
NECTIN3-211ENST00000493615 MBD4O95243 580 aa22.58■■□□□ 1.2
NECTIN3-211ENST00000493615 RTKN2Q8IZC4 609 aa22.58■■□□□ 1.2
NECTIN3-211ENST00000493615 AIDAQ96BJ3 306 aa22.58■■□□□ 1.2
NECTIN3-211ENST00000493615 ARMT1Q9H993 441 aa22.58■■□□□ 1.2
NECTIN3-211ENST00000493615 SLC4A3P48751 1232 aa22.57■■□□□ 1.2
NECTIN3-211ENST00000493615 KIAA2012Q0VF49 1180 aa22.57■■□□□ 1.2
NECTIN3-211ENST00000493615 SOGA3Q5TF21 947 aa22.57■■□□□ 1.2
NECTIN3-211ENST00000493615 SPTY2D1Q68D10 685 aaPredicted RBP22.57■■□□□ 1.2
NECTIN3-211ENST00000493615 ZGPATQ8N5A5 531 aaKnown RBP22.57■■□□□ 1.2
NECTIN3-211ENST00000493615 U3KPZ7 1027 aaPredicted RBP22.57■■□□□ 1.2
NECTIN3-211ENST00000493615 G3V3G9 751 aa22.56■■□□□ 1.2
NECTIN3-211ENST00000493615 CD2BP2O95400 341 aaKnown RBP22.56■■□□□ 1.2
NECTIN3-211ENST00000493615 LDHBP07195 334 aaKnown RBP22.56■■□□□ 1.2
NECTIN3-211ENST00000493615 RABEP1Q15276 862 aa22.56■■□□□ 1.2
NECTIN3-211ENST00000493615 GRIPAP1Q4V328 841 aa22.56■■□□□ 1.2
NECTIN3-211ENST00000493615 MFSD14BQ5SR56 506 aa22.56■■□□□ 1.2
NECTIN3-211ENST00000493615 DCAF8Q5TAQ9 597 aa22.56■■□□□ 1.2
NECTIN3-211ENST00000493615 LCORLQ8N3X6 602 aa22.56■■□□□ 1.2
NECTIN3-211ENST00000493615 TTLL5Q6EMB2 1281 aa22.56■■□□□ 1.2
NECTIN3-211ENST00000493615 PSMD1Q99460 953 aa22.56■■□□□ 1.2
NECTIN3-211ENST00000493615 FER1L6Q2WGJ9 1857 aa22.55■■□□□ 1.2
NECTIN3-211ENST00000493615 ADCK5Q3MIX3 580 aa22.55■■□□□ 1.2
NECTIN3-211ENST00000493615 PODNQ7Z5L7 613 aa22.55■■□□□ 1.2
NECTIN3-211ENST00000493615 SUPT20HQ8NEM7 779 aa22.55■■□□□ 1.2
NECTIN3-211ENST00000493615 MXD3Q9BW11 206 aa22.55■■□□□ 1.2
NECTIN3-211ENST00000493615 TBC1D2Q9BYX2 928 aa22.55■■□□□ 1.2
NECTIN3-211ENST00000493615 NFKBIEO00221 500 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 FGAP02671 866 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 RASSF7Q02833 373 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 DZIP1Q86YF9 867 aaKnown RBP22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 CERS5Q8N5B7 392 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 FBXW7Q969H0 707 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 RIOK1Q9BRS2 568 aaKnown RBP22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 DCAF8L1A6NGE4 600 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 PPIP5K2O43314 1243 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 PRKAB2O43741 272 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 ECE2O60344 883 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 CYP21A2P08686 494 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 DYNLL1P63167 89 aaKnown RBP22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 DIXDC1Q155Q3 683 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 TBC1D22AQ8WUA7 517 aa22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 UPF3BQ9BZI7 483 aaKnown RBP22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 ZNF277Q9NRM2 450 aaPredicted RBP22.54■■□□□ 1.2
NECTIN3-211ENST00000493615 MAGEB6P1A0A0J9YX57 407 aa22.53■■□□□ 1.2
NECTIN3-211ENST00000493615 GRIN3BO60391 1043 aa22.53■■□□□ 1.2
NECTIN3-211ENST00000493615 COL9A3Q14050 684 aaPredicted RBP22.53■■□□□ 1.2
NECTIN3-211ENST00000493615 ZKSCAN1P17029 563 aaPredicted RBP22.52■■□□□ 1.2
NECTIN3-211ENST00000493615 TAOK3Q9H2K8 898 aa22.52■■□□□ 1.2
NECTIN3-211ENST00000493615 RNF20Q5VTR2 975 aa22.51■■□□□ 1.19
NECTIN3-211ENST00000493615 CCDC88AQ3V6T2 1871 aa22.51■■□□□ 1.19
NECTIN3-211ENST00000493615 GSG1L2A8MUP6 293 aa22.51■■□□□ 1.19
NECTIN3-211ENST00000493615 PATL2C9JE40 543 aaKnown RBP22.51■■□□□ 1.19
NECTIN3-211ENST00000493615 APPP05067 770 aa22.51■■□□□ 1.19
NECTIN3-211ENST00000493615 NEK4P51957 841 aa22.51■■□□□ 1.19
NECTIN3-211ENST00000493615 TSGA10IPQ3SY00 556 aa22.51■■□□□ 1.19
NECTIN3-211ENST00000493615 SNX21Q969T3 373 aa22.51■■□□□ 1.19
NECTIN3-211ENST00000493615 EPB41L4AQ9HCS5 686 aaPredicted RBP22.51■■□□□ 1.19
NECTIN3-211ENST00000493615 YDJCA8MPS7 323 aa22.5■■□□□ 1.19
NECTIN3-211ENST00000493615 CPA1P15085 419 aa22.5■■□□□ 1.19
NECTIN3-211ENST00000493615 JAKMIP1Q96N16 626 aaKnown RBP22.5■■□□□ 1.19
NECTIN3-211ENST00000493615 AATFQ9NY61 560 aaKnown RBP eCLIP22.5■■□□□ 1.19
NECTIN3-211ENST00000493615 SLC4A4Q9Y6R1 1079 aa22.5■■□□□ 1.19
NECTIN3-211ENST00000493615 PRELPP51888 382 aa22.49■■□□□ 1.19
NECTIN3-211ENST00000493615 IGSF3O75054 1194 aa22.49■■□□□ 1.19
NECTIN3-211ENST00000493615 TMED8Q6PL24 325 aaPredicted RBP22.49■■□□□ 1.19
NECTIN3-211ENST00000493615 IFNL3Q8IZI9 196 aa22.49■■□□□ 1.19
NECTIN3-211ENST00000493615 COL4A5P29400 1685 aa22.49■■□□□ 1.19
NECTIN3-211ENST00000493615 SCN9AQ15858 1988 aa22.48■■□□□ 1.19
NECTIN3-211ENST00000493615 CASTP20810 708 aaKnown RBP22.48■■□□□ 1.19
NECTIN3-211ENST00000493615 HAND2P61296 217 aa22.48■■□□□ 1.19
NECTIN3-211ENST00000493615 BECN1Q14457 450 aa22.48■■□□□ 1.19
NECTIN3-211ENST00000493615 DACT2Q5SW24 774 aa22.48■■□□□ 1.19
NECTIN3-211ENST00000493615 STRIP1Q5VSL9 837 aa22.48■■□□□ 1.19
NECTIN3-211ENST00000493615 STOX1Q6ZVD7 989 aa22.48■■□□□ 1.19
NECTIN3-211ENST00000493615 LARGE2Q8N3Y3 721 aa22.48■■□□□ 1.19
NECTIN3-211ENST00000493615 SDR42E1Q8WUS8 393 aa22.48■■□□□ 1.19
NECTIN3-211ENST00000493615 CTNNA3Q9UI47 895 aa22.48■■□□□ 1.19
NECTIN3-211ENST00000493615 F8W031 263 aaPredicted RBP22.47■■□□□ 1.19
NECTIN3-211ENST00000493615 GNAT2P19087 354 aa22.47■■□□□ 1.19
NECTIN3-211ENST00000493615 GSTO1P78417 241 aa22.47■■□□□ 1.19
NECTIN3-211ENST00000493615 ALX1Q15699 326 aa22.47■■□□□ 1.19
NECTIN3-211ENST00000493615 TM6SF1Q9BZW5 370 aa22.47■■□□□ 1.19
NECTIN3-211ENST00000493615 ZSWIM6Q9HCJ5 1215 aa22.47■■□□□ 1.19
NECTIN3-211ENST00000493615 RPAP1Q9BWH6 1393 aaPredicted RBP22.47■■□□□ 1.19
NECTIN3-211ENST00000493615 MAST2Q6P0Q8 1798 aa22.47■■□□□ 1.19
NECTIN3-211ENST00000493615 SBF1O95248 1867 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms