RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 DEFB129Q9H1M3 183 aa11.66□□□□□ -0.54
SGIP1-213ENST00000493564 ZBTB40Q9NUA8 1239 aa11.66□□□□□ -0.54
SGIP1-213ENST00000493564 SERPINA10Q9UK55 444 aa11.66□□□□□ -0.54
SGIP1-213ENST00000493564 DDX19BQ9UMR2 479 aa11.66□□□□□ -0.54
SGIP1-213ENST00000493564 FZD1Q9UP38 647 aa11.66□□□□□ -0.54
SGIP1-213ENST00000493564 EXOC6BQ9Y2D4 811 aa11.66□□□□□ -0.54
SGIP1-213ENST00000493564 TRPM7Q96QT4 1865 aa11.66□□□□□ -0.54
SGIP1-213ENST00000493564 TTLL12Q14166 644 aaPredicted RBP11.65□□□□□ -0.54
SGIP1-213ENST00000493564 SIRT2Q8IXJ6 389 aa11.65□□□□□ -0.54
SGIP1-213ENST00000493564 ZNF70Q9UC06 446 aaPredicted RBP11.65□□□□□ -0.54
SGIP1-213ENST00000493564 DENND2AQ9ULE3 1009 aa11.65□□□□□ -0.54
SGIP1-213ENST00000493564 TCP10L2B9ZVM9 353 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 UBE2Q2LH0YL09 131 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 HSPA1AP0DMV8 641 aaKnown RBP11.64□□□□□ -0.55
SGIP1-213ENST00000493564 HSPA1BP0DMV9 641 aaKnown RBP11.64□□□□□ -0.55
SGIP1-213ENST00000493564 PRDX5P30044 214 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 ECE1P42892 770 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 CACNB3P54284 484 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 RASGRF1Q13972 1273 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 PDE3AQ14432 1141 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 DIXDC1Q155Q3 683 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 TNNI3KQ59H18 835 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 PI16Q6UXB8 463 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 APOBEC3FQ8IUX4 373 aaKnown RBP11.64□□□□□ -0.55
SGIP1-213ENST00000493564 TEKT1Q969V4 418 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 CCDC8Q9H0W5 538 aaPredicted RBP11.64□□□□□ -0.55
SGIP1-213ENST00000493564 ABCF2Q9UG63 623 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 NOP58Q9Y2X3 529 aaKnown RBP11.64□□□□□ -0.55
SGIP1-213ENST00000493564 FPGT-TNNI3KV9GXZ4 949 aa11.64□□□□□ -0.55
SGIP1-213ENST00000493564 COL1A1P02452 1464 aaPredicted RBP11.63□□□□□ -0.55
SGIP1-213ENST00000493564 LDHBP07195 334 aaKnown RBP11.63□□□□□ -0.55
SGIP1-213ENST00000493564 ZNF157P51786 506 aaPredicted RBP11.63□□□□□ -0.55
SGIP1-213ENST00000493564 RASA3Q14644 834 aa11.63□□□□□ -0.55
SGIP1-213ENST00000493564 NBPF12Q5TAG4 269 aaPredicted RBP11.63□□□□□ -0.55
SGIP1-213ENST00000493564 APOBEC3HQ6NTF7 200 aaKnown RBP11.63□□□□□ -0.55
SGIP1-213ENST00000493564 RGMBQ6NW40 437 aa11.63□□□□□ -0.55
SGIP1-213ENST00000493564 TBC1D9Q6ZT07 1266 aa11.63□□□□□ -0.55
SGIP1-213ENST00000493564 ZIC5Q96T25 663 aa11.63□□□□□ -0.55
SGIP1-213ENST00000493564 DBNDD2Q9BQY9 259 aa11.63□□□□□ -0.55
SGIP1-213ENST00000493564 SNRKQ9NRH2 765 aa11.63□□□□□ -0.55
SGIP1-213ENST00000493564 HMG20BQ9P0W2 317 aa11.63□□□□□ -0.55
SGIP1-213ENST00000493564 SEMA3EO15041 775 aa11.62□□□□□ -0.55
SGIP1-213ENST00000493564 NF2P35240 595 aa11.62□□□□□ -0.55
SGIP1-213ENST00000493564 HDLBPQ00341 1268 aaKnown RBP11.62□□□□□ -0.55
SGIP1-213ENST00000493564 SPDYE2Q495Y8 402 aa11.62□□□□□ -0.55
SGIP1-213ENST00000493564 RPAP2Q8IXW5 612 aaPredicted RBP11.62□□□□□ -0.55
SGIP1-213ENST00000493564 EAF2Q96CJ1 260 aaPredicted RBP11.62□□□□□ -0.55
SGIP1-213ENST00000493564 MRIQ9BWK5 157 aa11.62□□□□□ -0.55
SGIP1-213ENST00000493564 IL1RAPL2Q9NP60 686 aa11.62□□□□□ -0.55
SGIP1-213ENST00000493564 TLR7Q9NYK1 1049 aaKnown RBP11.62□□□□□ -0.55
SGIP1-213ENST00000493564 SUGT1Q9Y2Z0 365 aa11.62□□□□□ -0.55
SGIP1-213ENST00000493564 MCAMP43121 646 aa11.61□□□□□ -0.55
SGIP1-213ENST00000493564 TTC39AQ5SRH9 613 aa11.61□□□□□ -0.55
SGIP1-213ENST00000493564 HHIPL2Q6UWX4 724 aa11.61□□□□□ -0.55
SGIP1-213ENST00000493564 CDAN1Q8IWY9 1227 aa11.61□□□□□ -0.55
SGIP1-213ENST00000493564 SPATA5Q8NB90 893 aa11.61□□□□□ -0.55
SGIP1-213ENST00000493564 HHIPL1Q96JK4 782 aa11.61□□□□□ -0.55
SGIP1-213ENST00000493564 ZDHHC15Q96MV8 337 aa11.61□□□□□ -0.55
SGIP1-213ENST00000493564 TMEM39BQ9GZU3 492 aa11.61□□□□□ -0.55
SGIP1-213ENST00000493564 CHMP4BQ9H444 224 aaKnown RBP11.61□□□□□ -0.55
SGIP1-213ENST00000493564 GPR108Q9NPR9 543 aa11.61□□□□□ -0.55
SGIP1-213ENST00000493564 ANGEL1Q9UNK9 670 aaKnown RBP11.61□□□□□ -0.55
SGIP1-213ENST00000493564 FOXN1O15353 648 aa11.6□□□□□ -0.55
SGIP1-213ENST00000493564 HMMRO75330 724 aa11.6□□□□□ -0.55
SGIP1-213ENST00000493564 ARID4AP29374 1257 aaPredicted RBP11.6□□□□□ -0.55
SGIP1-213ENST00000493564 RRP1P56182 461 aaKnown RBP11.6□□□□□ -0.55
SGIP1-213ENST00000493564 CCDC158Q5M9N0 1113 aa11.6□□□□□ -0.55
SGIP1-213ENST00000493564 AACSQ86V21 672 aa11.6□□□□□ -0.55
SGIP1-213ENST00000493564 RHPN1Q8TCX5 695 aa11.6□□□□□ -0.55
SGIP1-213ENST00000493564 USP40Q9NVE5 1235 aa11.6□□□□□ -0.55
SGIP1-213ENST00000493564 WBP1LQ9NX94 342 aa11.6□□□□□ -0.55
SGIP1-213ENST00000493564 DBNLQ9UJU6 430 aaKnown RBP11.6□□□□□ -0.55
SGIP1-213ENST00000493564 DAGLAQ9Y4D2 1042 aa11.6□□□□□ -0.55
SGIP1-213ENST00000493564 MAST3O60307 1309 aa11.6□□□□□ -0.55
SGIP1-213ENST00000493564 SALL1Q9NSC2 1324 aa11.6□□□□□ -0.55
SGIP1-213ENST00000493564 FAM155AB1AL88 458 aaPredicted RBP11.59□□□□□ -0.55
SGIP1-213ENST00000493564 UQCRFS1P1P0C7P4 283 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 MAP2K2P36507 400 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 FKBP1BP68106 108 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 MAP2K1Q02750 393 aaPredicted RBP11.59□□□□□ -0.55
SGIP1-213ENST00000493564 MKRN3Q13064 507 aaKnown RBP11.59□□□□□ -0.55
SGIP1-213ENST00000493564 SUPT20HL1Q3ZLR7 823 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 CDC42EP5Q6NZY7 148 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 ERICH6Q7L0X2 663 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 ARMC9Q7Z3E5 817 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 DZIP1Q86YF9 867 aaKnown RBP11.59□□□□□ -0.55
SGIP1-213ENST00000493564 ERC1Q8IUD2 1116 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 ZGPATQ8N5A5 531 aaKnown RBP11.59□□□□□ -0.55
SGIP1-213ENST00000493564 AIDAQ96BJ3 306 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 RAI14Q9P0K7 980 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 TSKSQ9UJT2 592 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 NDUFB9Q9Y6M9 179 aa11.59□□□□□ -0.55
SGIP1-213ENST00000493564 USP2O75604 605 aaPredicted RBP11.58□□□□□ -0.56
SGIP1-213ENST00000493564 TNNI2P48788 182 aa11.58□□□□□ -0.56
SGIP1-213ENST00000493564 KIF23Q02241 960 aaPredicted RBP11.58□□□□□ -0.56
SGIP1-213ENST00000493564 MECOMQ03112 1051 aa11.58□□□□□ -0.56
SGIP1-213ENST00000493564 TCP10Q12799 353 aa11.58□□□□□ -0.56
SGIP1-213ENST00000493564 TNFAIP1Q13829 316 aa11.58□□□□□ -0.56
SGIP1-213ENST00000493564 HSP90AB4PQ58FF6 505 aa11.58□□□□□ -0.56
SGIP1-213ENST00000493564 SPTY2D1Q68D10 685 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms