RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 GPATCH8Q9UKJ3 1502 aaKnown RBP7.76□□□□□ -1.17
CCNB3-208ENST00000493507 FER1L4A9Z1Z3 1794 aa7.76□□□□□ -1.17
CCNB3-208ENST00000493507 VPS8Q8N3P4 1428 aa7.76□□□□□ -1.17
CCNB3-208ENST00000493507 PHLDB1Q86UU1 1377 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 ZFYVE16Q7Z3T8 1539 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 A0A1W2PP55 124 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 NFKBIEO00221 500 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 LDHBP07195 334 aaKnown RBP7.75□□□□□ -1.17
CCNB3-208ENST00000493507 PTPRAP18433 802 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 GRIK5Q16478 980 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 GDF6Q6KF10 455 aaPredicted RBP7.75□□□□□ -1.17
CCNB3-208ENST00000493507 C8orf86Q6ZUL3 223 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 WFDC8Q8IUA0 241 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 POP1Q99575 1024 aaKnown RBP7.75□□□□□ -1.17
CCNB3-208ENST00000493507 MUC3BQ9H195 1237 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 NPHS2Q9NP85 383 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 LATS2Q9NRM7 1088 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 NOP53Q9NZM5 478 aaKnown RBP7.75□□□□□ -1.17
CCNB3-208ENST00000493507 TRAPPC8Q9Y2L5 1435 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 CNTNAP5Q8WYK1 1306 aa7.75□□□□□ -1.17
CCNB3-208ENST00000493507 GADD45BO75293 160 aaPredicted RBP7.74□□□□□ -1.17
CCNB3-208ENST00000493507 NID1P14543 1247 aa7.74□□□□□ -1.17
CCNB3-208ENST00000493507 ACPPP15309 386 aa7.74□□□□□ -1.17
CCNB3-208ENST00000493507 COL9A3Q14050 684 aaPredicted RBP7.74□□□□□ -1.17
CCNB3-208ENST00000493507 MLECQ14165 292 aa7.74□□□□□ -1.17
CCNB3-208ENST00000493507 MSL1Q68DK7 614 aa7.74□□□□□ -1.17
CCNB3-208ENST00000493507 EPS8L3Q8TE67 593 aaKnown RBP7.74□□□□□ -1.17
CCNB3-208ENST00000493507 NXPE3Q969Y0 559 aa7.74□□□□□ -1.17
CCNB3-208ENST00000493507 EHD4Q9H223 541 aa7.74□□□□□ -1.17
CCNB3-208ENST00000493507 PPP4R2Q9NY27 417 aa7.74□□□□□ -1.17
CCNB3-208ENST00000493507 TRIM33Q9UPN9 1127 aa7.74□□□□□ -1.17
CCNB3-208ENST00000493507 TRAK1Q9UPV9 953 aa7.74□□□□□ -1.17
CCNB3-208ENST00000493507 DENND4BO75064 1496 aaPredicted RBP7.74□□□□□ -1.17
CCNB3-208ENST00000493507 LMTK3Q96Q04 1460 aa7.74□□□□□ -1.17
CCNB3-208ENST00000493507 CROCC2H7BZ55 1655 aa7.73□□□□□ -1.17
CCNB3-208ENST00000493507 PLEKHD1A6NEE1 506 aa7.73□□□□□ -1.17
CCNB3-208ENST00000493507 RNF225M0QZC1 329 aaPredicted RBP7.73□□□□□ -1.17
CCNB3-208ENST00000493507 PRPF40AO75400 957 aaKnown RBP7.73□□□□□ -1.17
CCNB3-208ENST00000493507 CDC27P30260 824 aa7.73□□□□□ -1.17
CCNB3-208ENST00000493507 IL22RA1Q8N6P7 574 aa7.73□□□□□ -1.17
CCNB3-208ENST00000493507 FRMD6Q96NE9 622 aa7.73□□□□□ -1.17
CCNB3-208ENST00000493507 PLVAPQ9BX97 442 aa7.73□□□□□ -1.17
CCNB3-208ENST00000493507 BHLHE41Q9C0J9 482 aaPredicted RBP7.73□□□□□ -1.17
CCNB3-208ENST00000493507 LIN7BQ9HAP6 207 aa7.73□□□□□ -1.17
CCNB3-208ENST00000493507 NCOA2Q15596 1464 aa7.73□□□□□ -1.17
CCNB3-208ENST00000493507 PLXNC1O60486 1568 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 GIPC1O14908 333 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 TRPA1O75762 1119 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 CEBPAP49715 358 aaPredicted RBP7.72□□□□□ -1.17
CCNB3-208ENST00000493507 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.72□□□□□ -1.17
CCNB3-208ENST00000493507 TRAPPC3LQ5T215 181 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 CCNJLQ8IV13 435 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 TRIM11Q96F44 468 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 LACRTQ9GZZ8 138 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 ADAM19Q9H013 955 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 SUV39H2Q9H5I1 410 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 WWC3Q9ULE0 1092 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 SPG7Q9UQ90 795 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 PPME1Q9Y570 386 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 LRRC9Q6ZRR7 1453 aa7.72□□□□□ -1.17
CCNB3-208ENST00000493507 REREQ9P2R6 1566 aa7.71□□□□□ -1.17
CCNB3-208ENST00000493507 SCAPERQ9BY12 1400 aa7.71□□□□□ -1.17
CCNB3-208ENST00000493507 IRS1P35568 1242 aa7.71□□□□□ -1.18
CCNB3-208ENST00000493507 CABP4P57796 275 aa7.71□□□□□ -1.18
CCNB3-208ENST00000493507 ILDR2Q71H61 639 aa7.71□□□□□ -1.18
CCNB3-208ENST00000493507 FBXO33Q7Z6M2 555 aa7.71□□□□□ -1.18
CCNB3-208ENST00000493507 DTWD1Q8N5C7 304 aa7.71□□□□□ -1.18
CCNB3-208ENST00000493507 BSNDQ8WZ55 320 aa7.71□□□□□ -1.18
CCNB3-208ENST00000493507 HHIPQ96QV1 700 aa7.71□□□□□ -1.18
CCNB3-208ENST00000493507 BCL2L13Q9BXK5 485 aa7.71□□□□□ -1.18
CCNB3-208ENST00000493507 PODXL2Q9NZ53 605 aa7.71□□□□□ -1.18
CCNB3-208ENST00000493507 BAG6P46379 1132 aa7.7□□□□□ -1.18
CCNB3-208ENST00000493507 RAC1P63000 192 aa7.7□□□□□ -1.18
CCNB3-208ENST00000493507 GRM2Q14416 872 aa7.7□□□□□ -1.18
CCNB3-208ENST00000493507 PRPF40BQ6NWY9 871 aaKnown RBP7.7□□□□□ -1.18
CCNB3-208ENST00000493507 ALYREFQ86V81 257 aaKnown RBP7.7□□□□□ -1.18
CCNB3-208ENST00000493507 DMRTC2Q8IXT2 367 aaPredicted RBP7.7□□□□□ -1.18
CCNB3-208ENST00000493507 ASAP3Q8TDY4 903 aa7.7□□□□□ -1.18
CCNB3-208ENST00000493507 TCF12Q99081 682 aa7.7□□□□□ -1.18
CCNB3-208ENST00000493507 SRCIN1Q9C0H9 1055 aa7.7□□□□□ -1.18
CCNB3-208ENST00000493507 SRA1Q9HD15 236 aaKnown RBP7.7□□□□□ -1.18
CCNB3-208ENST00000493507 C3P01024 1663 aa7.7□□□□□ -1.18
CCNB3-208ENST00000493507 CAMSAP2Q08AD1 1489 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 MBD5Q9P267 1494 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 ATP7AQ04656 1500 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 MAP3K1Q13233 1512 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 TRIM28Q13263 835 aaKnown RBP7.69□□□□□ -1.18
CCNB3-208ENST00000493507 ZNF326Q5BKZ1 582 aaKnown RBP7.69□□□□□ -1.18
CCNB3-208ENST00000493507 PRRT3Q5FWE3 981 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 FAM117BQ6P1L5 589 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 PI16Q6UXB8 463 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 MAP4K3Q8IVH8 894 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 DCAF11Q8TEB1 546 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 SETDB2Q96T68 719 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 BCO2Q9BYV7 579 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 BCL11AQ9H165 835 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 ZFYVE1Q9HBF4 777 aa7.69□□□□□ -1.18
CCNB3-208ENST00000493507 ZNF518AQ6AHZ1 1483 aa7.68□□□□□ -1.18
CCNB3-208ENST00000493507 A0A096LPE4 126 aa7.68□□□□□ -1.18
CCNB3-208ENST00000493507 A0A1W2PPZ6 126 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms