RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 CYP2E1P05181 493 aaPredicted RBP20.9■□□□□ 0.94
LIME1-208ENST00000493265 CNTROBQ8N137 903 aa20.9■□□□□ 0.94
LIME1-208ENST00000493265 WDR66Q8TBY9 1149 aa20.9■□□□□ 0.94
LIME1-208ENST00000493265 AIDAQ96BJ3 306 aa20.9■□□□□ 0.94
LIME1-208ENST00000493265 ANTXR1Q9H6X2 564 aa20.9■□□□□ 0.94
LIME1-208ENST00000493265 PAG1Q9NWQ8 432 aa20.9■□□□□ 0.94
LIME1-208ENST00000493265 AKAP11Q9UKA4 1901 aa20.89■□□□□ 0.93
LIME1-208ENST00000493265 F8W031 263 aaPredicted RBP20.89■□□□□ 0.93
LIME1-208ENST00000493265 MFSD14BQ5SR56 506 aa20.89■□□□□ 0.93
LIME1-208ENST00000493265 DACT2Q5SW24 774 aa20.89■□□□□ 0.93
LIME1-208ENST00000493265 TTC22Q5TAA0 569 aa20.89■□□□□ 0.93
LIME1-208ENST00000493265 STRIP1Q5VSL9 837 aa20.89■□□□□ 0.93
LIME1-208ENST00000493265 RILPL2Q969X0 211 aa20.89■□□□□ 0.93
LIME1-208ENST00000493265 PIH1D3Q9NQM4 214 aaKnown RBP20.89■□□□□ 0.93
LIME1-208ENST00000493265 TNIP1Q15025 636 aa20.88■□□□□ 0.93
LIME1-208ENST00000493265 LRP2BPQ9P2M1 347 aa20.88■□□□□ 0.93
LIME1-208ENST00000493265 ZBTB12Q9Y330 459 aaPredicted RBP20.88■□□□□ 0.93
LIME1-208ENST00000493265 GRIK5Q16478 980 aa20.87■□□□□ 0.93
LIME1-208ENST00000493265 CERS5Q8N5B7 392 aa20.87■□□□□ 0.93
LIME1-208ENST00000493265 TBC1D22AQ8WUA7 517 aa20.87■□□□□ 0.93
LIME1-208ENST00000493265 RAI14Q9P0K7 980 aa20.87■□□□□ 0.93
LIME1-208ENST00000493265 PDS5AQ29RF7 1337 aaKnown RBP20.86■□□□□ 0.93
LIME1-208ENST00000493265 IDH1O75874 414 aaKnown RBP20.86■□□□□ 0.93
LIME1-208ENST00000493265 VIL1P09327 827 aaKnown RBP20.86■□□□□ 0.93
LIME1-208ENST00000493265 GSPT1P15170 499 aaKnown RBP20.86■□□□□ 0.93
LIME1-208ENST00000493265 LMOD1P29536 600 aaPredicted RBP20.86■□□□□ 0.93
LIME1-208ENST00000493265 CTCFP49711 727 aaPredicted RBP20.86■□□□□ 0.93
LIME1-208ENST00000493265 RSBN1LQ6PCB5 846 aaPredicted RBP20.86■□□□□ 0.93
LIME1-208ENST00000493265 ABT1Q9ULW3 272 aaKnown RBP20.86■□□□□ 0.93
LIME1-208ENST00000493265 LDHBP07195 334 aaKnown RBP20.85■□□□□ 0.93
LIME1-208ENST00000493265 PRDX5P30044 214 aa20.85■□□□□ 0.93
LIME1-208ENST00000493265 TTF1Q15361 905 aaPredicted RBP20.85■□□□□ 0.93
LIME1-208ENST00000493265 DEFB115Q30KQ5 88 aa20.85■□□□□ 0.93
LIME1-208ENST00000493265 ERICH6Q7L0X2 663 aa20.85■□□□□ 0.93
LIME1-208ENST00000493265 KIAA0825Q8IV33 1275 aa20.85■□□□□ 0.93
LIME1-208ENST00000493265 ZGPATQ8N5A5 531 aaKnown RBP20.85■□□□□ 0.93
LIME1-208ENST00000493265 FSD1Q9BTV5 496 aa20.85■□□□□ 0.93
LIME1-208ENST00000493265 PRDM10Q9NQV6 1147 aa20.85■□□□□ 0.93
LIME1-208ENST00000493265 PSME4Q14997 1843 aa20.84■□□□□ 0.93
LIME1-208ENST00000493265 RASSF10A6NK89 507 aa20.84■□□□□ 0.93
LIME1-208ENST00000493265 SCNN1DP51172 638 aa20.84■□□□□ 0.93
LIME1-208ENST00000493265 SPTY2D1Q68D10 685 aaPredicted RBP20.84■□□□□ 0.93
LIME1-208ENST00000493265 WBP1LQ9NX94 342 aa20.84■□□□□ 0.93
LIME1-208ENST00000493265 TRPM7Q96QT4 1865 aa20.84■□□□□ 0.93
LIME1-208ENST00000493265 ZNF646O15015 1829 aaPredicted RBP20.83■□□□□ 0.93
LIME1-208ENST00000493265 SALL1Q9NSC2 1324 aa20.83■□□□□ 0.93
LIME1-208ENST00000493265 SDSP20132 328 aa20.83■□□□□ 0.93
LIME1-208ENST00000493265 EPS15P42566 896 aa20.83■□□□□ 0.93
LIME1-208ENST00000493265 GMPSP49915 693 aaPredicted RBP20.83■□□□□ 0.93
LIME1-208ENST00000493265 LBX1P52954 281 aa20.83■□□□□ 0.93
LIME1-208ENST00000493265 FMR1Q06787 632 aaKnown RBP eCLIP20.83■□□□□ 0.93
LIME1-208ENST00000493265 DZIP1Q86YF9 867 aaKnown RBP20.83■□□□□ 0.93
LIME1-208ENST00000493265 EVI5LQ96CN4 794 aa20.83■□□□□ 0.93
LIME1-208ENST00000493265 TTF2Q9UNY4 1162 aaKnown RBP20.83■□□□□ 0.93
LIME1-208ENST00000493265 ZBTB22O15209 634 aa20.82■□□□□ 0.92
LIME1-208ENST00000493265 MYO5AQ9Y4I1 1855 aaKnown RBP20.81■□□□□ 0.92
LIME1-208ENST00000493265 MYO3BQ8WXR4 1341 aa20.81■□□□□ 0.92
LIME1-208ENST00000493265 WDR33Q9C0J8 1336 aaKnown RBP20.81■□□□□ 0.92
LIME1-208ENST00000493265 FKBP1AP62942 108 aaKnown RBP20.81■□□□□ 0.92
LIME1-208ENST00000493265 MECOMQ03112 1051 aa20.81■□□□□ 0.92
LIME1-208ENST00000493265 MAP3K12Q12852 859 aa20.81■□□□□ 0.92
LIME1-208ENST00000493265 KBTBD3Q8NAB2 608 aa20.81■□□□□ 0.92
LIME1-208ENST00000493265 SHTN1A0MZ66 631 aa20.8■□□□□ 0.92
LIME1-208ENST00000493265 CHGBP05060 677 aa20.8■□□□□ 0.92
LIME1-208ENST00000493265 DIXDC1Q155Q3 683 aa20.8■□□□□ 0.92
LIME1-208ENST00000493265 SLFNL1Q499Z3 407 aa20.8■□□□□ 0.92
LIME1-208ENST00000493265 SLC9C2Q5TAH2 1124 aa20.8■□□□□ 0.92
LIME1-208ENST00000493265 PAXIP1Q6ZW49 1069 aaPredicted RBP20.8■□□□□ 0.92
LIME1-208ENST00000493265 MAGEB6Q8N7X4 407 aa20.8■□□□□ 0.92
LIME1-208ENST00000493265 AGBL3Q8NEM8 1001 aa20.8■□□□□ 0.92
LIME1-208ENST00000493265 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.8■□□□□ 0.921e-9■■■■■ 29
LIME1-208ENST00000493265 THSD7BQ9C0I4 1608 aa20.79■□□□□ 0.92
LIME1-208ENST00000493265 RBM5P52756 815 aaKnown RBP eCLIP20.79■□□□□ 0.92
LIME1-208ENST00000493265 GRM1Q13255 1194 aa20.79■□□□□ 0.92
LIME1-208ENST00000493265 NAA16Q6N069 864 aaPredicted RBP20.79■□□□□ 0.92
LIME1-208ENST00000493265 GMLQ99445 158 aa20.79■□□□□ 0.92
LIME1-208ENST00000493265 TRAF5O00463 557 aa20.78■□□□□ 0.92
LIME1-208ENST00000493265 USP17L8P0C7I0 530 aa20.78■□□□□ 0.92
LIME1-208ENST00000493265 HSPA8P11142 646 aaKnown RBP20.78■□□□□ 0.92
LIME1-208ENST00000493265 PDE6AP16499 860 aa20.78■□□□□ 0.92
LIME1-208ENST00000493265 RPS12P25398 132 aaKnown RBP20.78■□□□□ 0.92
LIME1-208ENST00000493265 BMP2KLQ5H9B9 411 aa20.78■□□□□ 0.92
LIME1-208ENST00000493265 MICALL2Q8IY33 904 aa20.78■□□□□ 0.92
LIME1-208ENST00000493265 OGFOD1Q8N543 542 aa20.78■□□□□ 0.92
LIME1-208ENST00000493265 NSUN4Q96CB9 384 aaKnown RBP20.78■□□□□ 0.92
LIME1-208ENST00000493265 CNOT7Q9UIV1 285 aaKnown RBP20.78■□□□□ 0.92
LIME1-208ENST00000493265 HDAC9Q9UKV0 1011 aa20.78■□□□□ 0.92
LIME1-208ENST00000493265 SUGT1Q9Y2Z0 365 aa20.78■□□□□ 0.92
LIME1-208ENST00000493265 AK9Q5TCS8 1911 aa20.78■□□□□ 0.92
LIME1-208ENST00000493265 DOCK2Q92608 1830 aa20.78■□□□□ 0.92
LIME1-208ENST00000493265 CYP7A1P22680 504 aa20.77■□□□□ 0.92
LIME1-208ENST00000493265 RBM26Q5T8P6 1007 aaKnown RBP20.77■□□□□ 0.92
LIME1-208ENST00000493265 ZSCAN25Q6NSZ9 544 aa20.77■□□□□ 0.92
LIME1-208ENST00000493265 USP50Q70EL3 339 aaPredicted RBP20.77■□□□□ 0.92
LIME1-208ENST00000493265 MAST3O60307 1309 aa20.77■□□□□ 0.91
LIME1-208ENST00000493265 ZNF532Q9HCE3 1301 aa20.77■□□□□ 0.91
LIME1-208ENST00000493265 RNF113AO15541 343 aaKnown RBP20.76■□□□□ 0.91
LIME1-208ENST00000493265 GSTO1P78417 241 aa20.76■□□□□ 0.91
LIME1-208ENST00000493265 MAP2K1Q02750 393 aaPredicted RBP20.76■□□□□ 0.91
LIME1-208ENST00000493265 ZNF384Q8TF68 577 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms