RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 PLEKHM2Q8IWE5 1019 aa7.34□□□□□ -1.24
NF1-215ENST00000493220 KBTBD3Q8NAB2 608 aa7.34□□□□□ -1.24
NF1-215ENST00000493220 TTLL11Q8NHH1 800 aa7.34□□□□□ -1.24
NF1-215ENST00000493220 DOK7Q18PE1 504 aa7.33□□□□□ -1.24
NF1-215ENST00000493220 CCDC102BQ68D86 513 aa7.33□□□□□ -1.24
NF1-215ENST00000493220 USP48Q86UV5 1035 aa7.33□□□□□ -1.24
NF1-215ENST00000493220 SULF1Q8IWU6 871 aa7.33□□□□□ -1.24
NF1-215ENST00000493220 TSHZ3Q63HK5 1081 aa7.33□□□□□ -1.24
NF1-215ENST00000493220 BACH2Q9BYV9 841 aa7.33□□□□□ -1.24
NF1-215ENST00000493220 GOPCQ9HD26 462 aa7.33□□□□□ -1.24
NF1-215ENST00000493220 INTS5Q6P9B9 1019 aaKnown RBP7.33□□□□□ -1.24
NF1-215ENST00000493220 BICD2Q8TD16 824 aa7.33□□□□□ -1.24
NF1-215ENST00000493220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.33□□□□□ -1.24
NF1-215ENST00000493220 USP40Q9NVE5 1235 aa7.33□□□□□ -1.24
NF1-215ENST00000493220 RBM28Q9NW13 759 aaKnown RBP7.33□□□□□ -1.24
NF1-215ENST00000493220 WDR33Q9C0J8 1336 aaKnown RBP7.33□□□□□ -1.24
NF1-215ENST00000493220 NBPF26B4DH59 902 aa7.33□□□□□ -1.24
NF1-215ENST00000493220 NBPF10Q6P3W6 841 aaKnown RBP7.33□□□□□ -1.24
NF1-215ENST00000493220 NBPF15Q8N660 670 aa7.33□□□□□ -1.24
NF1-215ENST00000493220 PHRF1Q9P1Y6 1649 aaKnown RBP7.33□□□□□ -1.24
NF1-215ENST00000493220 KIAA2012Q0VF49 1180 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 LRRC24Q50LG9 513 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 SEC31BQ9NQW1 1179 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 JAG2Q9Y219 1238 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 SLIT2O94813 1529 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 METAP2P50579 478 aaKnown RBP eCLIP7.32□□□□□ -1.24
NF1-215ENST00000493220 SYNE4Q8N205 404 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 HAUS7Q99871 368 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 LMO7Q8WWI1 1683 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 C21orf2O43822 256 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 ZAP70P43403 619 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 GYG1P46976 350 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 CSADQ9Y600 493 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 EPB41L2O43491 1005 aaKnown RBP7.32□□□□□ -1.24
NF1-215ENST00000493220 CCDC148Q8NFR7 591 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 BEGAINQ9BUH8 593 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 AATFQ9NY61 560 aaKnown RBP eCLIP7.32□□□□□ -1.24
NF1-215ENST00000493220 RBM8AQ9Y5S9 174 aaKnown RBP7.32□□□□□ -1.24
NF1-215ENST00000493220 LTBP4Q8N2S1 1624 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 BCAMP50895 628 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 PRR5LQ6MZQ0 368 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 ANKRD20A12PQ8NF67 263 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 LIMCH1Q9UPQ0 1083 aa7.32□□□□□ -1.24
NF1-215ENST00000493220 POLA2Q14181 598 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 SF3B3Q15393 1217 aaKnown RBP7.31□□□□□ -1.24
NF1-215ENST00000493220 SUPT20HL1Q3ZLR7 823 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 ARMT1Q9H993 441 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 SAP30BPQ9UHR5 308 aaKnown RBP7.31□□□□□ -1.24
NF1-215ENST00000493220 ZNF532Q9HCE3 1301 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 KDM4AO75164 1064 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 HAND2P61296 217 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 PABPC4Q13310 644 aaKnown RBP eCLIP7.31□□□□□ -1.24
NF1-215ENST00000493220 LARP1BQ659C4 914 aaKnown RBP7.31□□□□□ -1.24
NF1-215ENST00000493220 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.31□□□□□ -1.24
NF1-215ENST00000493220 ADCY9O60503 1353 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 RGPD8O14715 1765 aaPredicted RBP7.31□□□□□ -1.24
NF1-215ENST00000493220 BAG4O95429 457 aaKnown RBP7.31□□□□□ -1.24
NF1-215ENST00000493220 PCP11498 1178 aaKnown RBP7.31□□□□□ -1.24
NF1-215ENST00000493220 STK38Q15208 465 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 TMCO4Q5TGY1 634 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 PODNQ7Z5L7 613 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 COL23A1Q86Y22 540 aaPredicted RBP7.31□□□□□ -1.24
NF1-215ENST00000493220 NOC3LQ8WTT2 800 aaKnown RBP7.31□□□□□ -1.24
NF1-215ENST00000493220 IQCA1LA6NCM1 817 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 IGKV5-2P06315 115 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 NT5C2P49902 561 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 WDR78Q5VTH9 848 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 ARMC9Q7Z3E5 817 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 ILDR1Q86SU0 546 aaPredicted RBP7.31□□□□□ -1.24
NF1-215ENST00000493220 SWAP70Q9UH65 585 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 PNMA2Q9UL42 364 aa7.31□□□□□ -1.24
NF1-215ENST00000493220 CHMLP26374 656 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 BTDP43251 543 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 RRP36Q96EU6 259 aaKnown RBP7.3□□□□□ -1.24
NF1-215ENST00000493220 RAB34Q9BZG1 259 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 FAM13BQ9NYF5 915 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 STX8Q9UNK0 236 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 ECE2O60344 883 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 MMP14P50281 582 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 NLRP5P59047 1200 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 MTX1Q13505 466 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 UBE3CQ15386 1083 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 SLC4A8Q2Y0W8 1093 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 DEFB132Q7Z7B7 95 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 DSCC1Q9BVC3 393 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 CFAP45Q9UL16 551 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 KDM2BQ8NHM5 1336 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 NHSL1Q5SYE7 1610 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 GPAA1O43292 621 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 ZBTB43O43298 467 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 ZNF408Q9H9D4 720 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 PRM3Q9NNZ6 103 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 SUGT1Q9Y2Z0 365 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 ABCC12Q96J65 1359 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 STRCQ7RTU9 1775 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 LETM1O95202 739 aaPredicted RBP7.3□□□□□ -1.24
NF1-215ENST00000493220 NTSR2O95665 410 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 RTN1Q16799 776 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 TMEM87BQ96K49 555 aa7.3□□□□□ -1.24
NF1-215ENST00000493220 NAP1L4Q99733 375 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms