RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 TEPSINQ96N21 525 aa28.37■■■□□ 2.13
HMG20B-214ENST00000493191 CRHR2Q13324 411 aa28.36■■■□□ 2.13
HMG20B-214ENST00000493191 RABL6Q3YEC7 729 aaPredicted RBP28.36■■■□□ 2.13
HMG20B-214ENST00000493191 METTL24Q5JXM2 366 aa28.36■■■□□ 2.13
HMG20B-214ENST00000493191 OTOP1Q7RTM1 612 aa28.36■■■□□ 2.13
HMG20B-214ENST00000493191 MRPL50Q8N5N7 158 aaKnown RBP28.36■■■□□ 2.13
HMG20B-214ENST00000493191 ANKRD44Q8N8A2 993 aa28.36■■■□□ 2.13
HMG20B-214ENST00000493191 OPTNQ96CV9 577 aa28.36■■■□□ 2.13
HMG20B-214ENST00000493191 PTPN18Q99952 460 aa28.36■■■□□ 2.13
HMG20B-214ENST00000493191 TMEM39BQ9GZU3 492 aa28.36■■■□□ 2.13
HMG20B-214ENST00000493191 OTOFQ9HC10 1997 aa28.36■■■□□ 2.13
HMG20B-214ENST00000493191 HTTP42858 3142 aa28.36■■■□□ 2.13
HMG20B-214ENST00000493191 ARAP2Q8WZ64 1704 aa28.35■■■□□ 2.13
HMG20B-214ENST00000493191 ZNF521Q96K83 1311 aa28.35■■■□□ 2.13
HMG20B-214ENST00000493191 FRAT2O75474 233 aaPredicted RBP28.34■■■□□ 2.13
HMG20B-214ENST00000493191 PRPF38BQ5VTL8 546 aaKnown RBP28.34■■■□□ 2.13
HMG20B-214ENST00000493191 KLHDC4Q8TBB5 520 aa28.34■■■□□ 2.13
HMG20B-214ENST00000493191 TESPA1A2RU30 521 aaPredicted RBP28.33■■■□□ 2.13
HMG20B-214ENST00000493191 CAVIN4Q5BKX8 364 aa28.33■■■□□ 2.13
HMG20B-214ENST00000493191 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.33■■■□□ 2.13
HMG20B-214ENST00000493191 CD99L2Q8TCZ2 262 aa28.33■■■□□ 2.13
HMG20B-214ENST00000493191 CNKSR2Q8WXI2 1034 aa28.33■■■□□ 2.13
HMG20B-214ENST00000493191 ERO1AQ96HE7 468 aa28.33■■■□□ 2.13
HMG20B-214ENST00000493191 CENPFP49454 3210 aa28.32■■■□□ 2.12
HMG20B-214ENST00000493191 ZEB1P37275 1124 aaPredicted RBP28.32■■■□□ 2.12
HMG20B-214ENST00000493191 TNNI2P48788 182 aa28.32■■■□□ 2.12
HMG20B-214ENST00000493191 VGLL2Q8N8G2 317 aa28.32■■■□□ 2.12
HMG20B-214ENST00000493191 MS4A4AQ96JQ5 239 aa28.32■■■□□ 2.12
HMG20B-214ENST00000493191 PDE8BO95263 885 aa28.31■■■□□ 2.12
HMG20B-214ENST00000493191 BCAMP50895 628 aa28.31■■■□□ 2.12
HMG20B-214ENST00000493191 TBC1D22AQ8WUA7 517 aa28.31■■■□□ 2.12
HMG20B-214ENST00000493191 CACNB3P54284 484 aa28.3■■■□□ 2.12
HMG20B-214ENST00000493191 MAP3K9P80192 1104 aa28.3■■■□□ 2.12
HMG20B-214ENST00000493191 VGLL4Q14135 290 aa28.3■■■□□ 2.12
HMG20B-214ENST00000493191 PTPRCP08575 1304 aa28.29■■■□□ 2.12
HMG20B-214ENST00000493191 HDLBPQ00341 1268 aaKnown RBP28.29■■■□□ 2.12
HMG20B-214ENST00000493191 TEKT1Q969V4 418 aa28.29■■■□□ 2.12
HMG20B-214ENST00000493191 PTPN22Q9Y2R2 807 aa28.29■■■□□ 2.12
HMG20B-214ENST00000493191 SP3Q02447 781 aa28.28■■■□□ 2.12
HMG20B-214ENST00000493191 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.28■■■□□ 2.122e-6■□□□□ 9.8
HMG20B-214ENST00000493191 BRI3BPQ8WY22 251 aa28.28■■■□□ 2.12
HMG20B-214ENST00000493191 SSH1Q8WYL5 1049 aa28.28■■■□□ 2.12
HMG20B-214ENST00000493191 USP44Q9H0E7 712 aa28.28■■■□□ 2.12
HMG20B-214ENST00000493191 CSADQ9Y600 493 aa28.28■■■□□ 2.12
HMG20B-214ENST00000493191 KIAA0100Q14667 2235 aaKnown RBP28.28■■■□□ 2.12
HMG20B-214ENST00000493191 CAP1Q01518 475 aa28.27■■■□□ 2.12
HMG20B-214ENST00000493191 EFCC1Q9HA90 598 aa28.27■■■□□ 2.12
HMG20B-214ENST00000493191 MKI67P46013 3256 aaKnown RBP28.26■■■□□ 2.12
HMG20B-214ENST00000493191 CCL15-CCL14A0A0B4J2E2 113 aa28.26■■■□□ 2.11
HMG20B-214ENST00000493191 POTEFA5A3E0 1075 aa28.26■■■□□ 2.11
HMG20B-214ENST00000493191 CCL15Q16663 113 aa28.26■■■□□ 2.11
HMG20B-214ENST00000493191 OTUD5Q96G74 571 aa28.26■■■□□ 2.11
HMG20B-214ENST00000493191 GTF2A2P52657 109 aa28.25■■■□□ 2.11
HMG20B-214ENST00000493191 INTS3Q68E01 1043 aaKnown RBP28.25■■■□□ 2.11
HMG20B-214ENST00000493191 ZDHHC15Q96MV8 337 aa28.25■■■□□ 2.11
HMG20B-214ENST00000493191 IFIT1P09914 478 aaKnown RBP28.24■■■□□ 2.11
HMG20B-214ENST00000493191 PUM3Q15397 648 aaKnown RBP28.24■■■□□ 2.11
HMG20B-214ENST00000493191 TMOD2Q9NZR1 351 aa28.24■■■□□ 2.11
HMG20B-214ENST00000493191 E9PSI1 815 aa28.23■■■□□ 2.11
HMG20B-214ENST00000493191 FGFR2P21802 821 aa28.23■■■□□ 2.11
HMG20B-214ENST00000493191 TAF1CQ15572 869 aaPredicted RBP28.23■■■□□ 2.11
HMG20B-214ENST00000493191 APOBEC3HQ6NTF7 200 aaKnown RBP28.23■■■□□ 2.11
HMG20B-214ENST00000493191 MRIQ9BWK5 157 aa28.23■■■□□ 2.11
HMG20B-214ENST00000493191 FAM43AQ8N2R8 423 aa28.22■■■□□ 2.11
HMG20B-214ENST00000493191 ZFYVE28Q9HCC9 887 aa28.22■■■□□ 2.11
HMG20B-214ENST00000493191 ZKSCAN4Q969J2 545 aaPredicted RBP28.21■■■□□ 2.11
HMG20B-214ENST00000493191 WRNIP1Q96S55 665 aa28.21■■■□□ 2.11
HMG20B-214ENST00000493191 SUGT1Q9Y2Z0 365 aa28.21■■■□□ 2.11
HMG20B-214ENST00000493191 MAST3O60307 1309 aa28.2■■■□□ 2.11
HMG20B-214ENST00000493191 KIF16BQ96L93 1317 aa28.2■■■□□ 2.11
HMG20B-214ENST00000493191 BRCA2P51587 3418 aa28.2■■■□□ 2.11
HMG20B-214ENST00000493191 EYA2O00167 538 aa28.2■■■□□ 2.1
HMG20B-214ENST00000493191 RFX5P48382 616 aaPredicted RBP28.2■■■□□ 2.1
HMG20B-214ENST00000493191 HHIPL2Q6UWX4 724 aa28.2■■■□□ 2.1
HMG20B-214ENST00000493191 FAM83AQ86UY5 434 aa28.2■■■□□ 2.1
HMG20B-214ENST00000493191 SNCAIPQ9Y6H5 919 aa28.2■■■□□ 2.1
HMG20B-214ENST00000493191 SPDYE5A6NIY4 337 aa28.19■■■□□ 2.1
HMG20B-214ENST00000493191 SLC5A1P13866 664 aa28.19■■■□□ 2.1
HMG20B-214ENST00000493191 SLFN5Q08AF3 891 aa28.19■■■□□ 2.1
HMG20B-214ENST00000493191 FKBP1CQ5VVH2 108 aa28.19■■■□□ 2.1
HMG20B-214ENST00000493191 ARMC5Q96C12 935 aa28.19■■■□□ 2.1
HMG20B-214ENST00000493191 ERO1BQ86YB8 467 aa28.18■■■□□ 2.1
HMG20B-214ENST00000493191 MIGA2Q7L4E1 593 aa28.17■■■□□ 2.1
HMG20B-214ENST00000493191 LPIN2Q92539 896 aa28.17■■■□□ 2.1
HMG20B-214ENST00000493191 HOOK2Q96ED9 719 aa28.17■■■□□ 2.1
HMG20B-214ENST00000493191 MYH13Q9UKX3 1938 aa28.17■■■□□ 2.1
HMG20B-214ENST00000493191 IRF6O14896 467 aa28.16■■■□□ 2.1
HMG20B-214ENST00000493191 CETPP11597 493 aa28.16■■■□□ 2.1
HMG20B-214ENST00000493191 ATG9AQ7Z3C6 839 aa28.16■■■□□ 2.1
HMG20B-214ENST00000493191 WDR66Q8TBY9 1149 aa28.16■■■□□ 2.1
HMG20B-214ENST00000493191 PCDH10Q9P2E7 1040 aa28.16■■■□□ 2.1
HMG20B-214ENST00000493191 EN2P19622 333 aaPredicted RBP28.15■■■□□ 2.1
HMG20B-214ENST00000493191 ARHGEF6Q15052 776 aa28.15■■■□□ 2.1
HMG20B-214ENST00000493191 ALDH1L2Q3SY69 923 aa28.15■■■□□ 2.1
HMG20B-214ENST00000493191 CDCA7LQ96GN5 454 aa28.15■■■□□ 2.1
HMG20B-214ENST00000493191 SIL1Q9H173 461 aa28.15■■■□□ 2.1
HMG20B-214ENST00000493191 SMC4Q9NTJ3 1288 aa28.15■■■□□ 2.1
HMG20B-214ENST00000493191 BTBD19C9JJ37 291 aa28.14■■■□□ 2.1
HMG20B-214ENST00000493191 SNAPC2Q13487 334 aa28.14■■■□□ 2.1
HMG20B-214ENST00000493191 DCAF15Q66K64 600 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms