RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 KIF6Q6ZMV9 814 aa8.41□□□□□ -1.06
HERC4-211ENST00000492996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.41□□□□□ -1.06
HERC4-211ENST00000492996 GAS2L3Q86XJ1 694 aa8.41□□□□□ -1.06
HERC4-211ENST00000492996 ZBTB3Q9H5J0 574 aa8.41□□□□□ -1.06
HERC4-211ENST00000492996 TMEM88BA6NKF7 163 aa8.4□□□□□ -1.06
HERC4-211ENST00000492996 HSPA4P34932 840 aa8.4□□□□□ -1.06
HERC4-211ENST00000492996 KCNJ4P48050 445 aa8.4□□□□□ -1.06
HERC4-211ENST00000492996 TTLL7Q6ZT98 887 aa8.4□□□□□ -1.06
HERC4-211ENST00000492996 FAM227BQ96M60 508 aa8.4□□□□□ -1.06
HERC4-211ENST00000492996 MAF1Q9H063 256 aa8.4□□□□□ -1.06
HERC4-211ENST00000492996 LSG1Q9H089 658 aaKnown RBP8.4□□□□□ -1.06
HERC4-211ENST00000492996 CWC22Q9HCG8 908 aaKnown RBP8.4□□□□□ -1.06
HERC4-211ENST00000492996 TTC41PQ6P2S7 1318 aa8.4□□□□□ -1.06
HERC4-211ENST00000492996 RAD50Q92878 1312 aa8.4□□□□□ -1.06
HERC4-211ENST00000492996 A0A0G2JLW4 131 aa8.4□□□□□ -1.07
HERC4-211ENST00000492996 ATP2B4P23634 1241 aa8.4□□□□□ -1.07
HERC4-211ENST00000492996 ANAPC15P60006 121 aa8.4□□□□□ -1.07
HERC4-211ENST00000492996 BSDC1Q9NW68 430 aaPredicted RBP8.4□□□□□ -1.07
HERC4-211ENST00000492996 SNX14Q9Y5W7 946 aa8.4□□□□□ -1.07
HERC4-211ENST00000492996 NAV1Q8NEY1 1877 aa8.4□□□□□ -1.07
HERC4-211ENST00000492996 FSD2A1L4K1 749 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 ZNF541Q9H0D2 1346 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 CYP2E1P05181 493 aaPredicted RBP8.39□□□□□ -1.07
HERC4-211ENST00000492996 SLC10A3P09131 477 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 HSPA8P11142 646 aaKnown RBP8.39□□□□□ -1.07
HERC4-211ENST00000492996 MAP2K1Q02750 393 aaPredicted RBP8.39□□□□□ -1.07
HERC4-211ENST00000492996 SKOR2Q2VWA4 1001 aaPredicted RBP8.39□□□□□ -1.07
HERC4-211ENST00000492996 SUSD4Q5VX71 490 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 DPY19L2Q6NUT2 758 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 CAVIN1Q6NZI2 390 aaKnown RBP8.39□□□□□ -1.07
HERC4-211ENST00000492996 SYNE4Q8N205 404 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 EYA3Q99504 573 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 FSD1Q9BTV5 496 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 GNRH1P01148 92 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 CASTP20810 708 aaKnown RBP8.39□□□□□ -1.07
HERC4-211ENST00000492996 FMR1Q06787 632 aaKnown RBP eCLIP8.39□□□□□ -1.07
HERC4-211ENST00000492996 NOL9Q5SY16 702 aaKnown RBP8.39□□□□□ -1.07
HERC4-211ENST00000492996 LMBR1LQ6UX01 489 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 RUFY2Q8WXA3 655 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 GRPEL1Q9HAV7 217 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 SH3TC1Q8TE82 1336 aa8.39□□□□□ -1.07
HERC4-211ENST00000492996 IGHA2P01877 340 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 ECE1P42892 770 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 CTCFP49711 727 aaPredicted RBP8.38□□□□□ -1.07
HERC4-211ENST00000492996 MCM2P49736 904 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 TFCP2Q12800 502 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 NMIQ13287 307 aaPredicted RBP8.38□□□□□ -1.07
HERC4-211ENST00000492996 ADCK5Q3MIX3 580 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 ZNF512BQ96KM6 892 aaPredicted RBP8.38□□□□□ -1.07
HERC4-211ENST00000492996 RLFQ13129 1914 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 ATRNL1Q5VV63 1379 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 CHGBP05060 677 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 EVI5LQ96CN4 794 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 JAKMIP1Q96N16 626 aaKnown RBP8.38□□□□□ -1.07
HERC4-211ENST00000492996 AK2P54819 239 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 LDLRAD1Q5T700 205 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 METTL16Q86W50 562 aaKnown RBP8.38□□□□□ -1.07
HERC4-211ENST00000492996 TCEANC2Q96MN5 208 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 CCDC85AQ96PX6 553 aaPredicted RBP8.38□□□□□ -1.07
HERC4-211ENST00000492996 DNAJC2Q99543 621 aaKnown RBP8.38□□□□□ -1.07
HERC4-211ENST00000492996 GDPD2Q9HCC8 539 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 LMBRD1Q9NUN5 540 aa8.38□□□□□ -1.07
HERC4-211ENST00000492996 RBM27Q9P2N5 1060 aaKnown RBP8.38□□□□□ -1.07
HERC4-211ENST00000492996 MYPNQ86TC9 1320 aa8.37□□□□□ -1.07
HERC4-211ENST00000492996 A0A0D9SFI3 127 aa8.37□□□□□ -1.07
HERC4-211ENST00000492996 PDE8AO60658 829 aa8.37□□□□□ -1.07
HERC4-211ENST00000492996 CLCN1P35523 988 aa8.37□□□□□ -1.07
HERC4-211ENST00000492996 PTPN12Q05209 780 aaKnown RBP8.37□□□□□ -1.07
HERC4-211ENST00000492996 GTF2E1P29083 439 aaPredicted RBP8.37□□□□□ -1.07
HERC4-211ENST00000492996 MRE11P49959 708 aa8.37□□□□□ -1.07
HERC4-211ENST00000492996 PRMT2P55345 433 aa8.37□□□□□ -1.07
HERC4-211ENST00000492996 CUL4AQ13619 759 aa8.37□□□□□ -1.07
HERC4-211ENST00000492996 COL9A3Q14050 684 aaPredicted RBP8.37□□□□□ -1.07
HERC4-211ENST00000492996 PODNQ7Z5L7 613 aa8.37□□□□□ -1.07
HERC4-211ENST00000492996 DHX37Q8IY37 1157 aaKnown RBP8.37□□□□□ -1.07
HERC4-211ENST00000492996 NEUROD6Q96NK8 337 aa8.37□□□□□ -1.07
HERC4-211ENST00000492996 CIAO1O76071 339 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 KLHL40Q2TBA0 621 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 DBNDD2Q9BQY9 259 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 DBNLQ9UJU6 430 aaKnown RBP8.36□□□□□ -1.07
HERC4-211ENST00000492996 RBM8AQ9Y5S9 174 aaKnown RBP8.36□□□□□ -1.07
HERC4-211ENST00000492996 SEMA3EO15041 775 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 PTMSP20962 102 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 HLFQ16534 295 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 CLEC17AQ6ZS10 378 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 RUFY3Q7L099 469 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 ZNF594Q96JF6 807 aaPredicted RBP8.36□□□□□ -1.07
HERC4-211ENST00000492996 ANKRD2Q9GZV1 360 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 COA1Q9GZY4 146 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 RNF181Q9P0P0 153 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 LARGE1O95461 756 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 FAM13BQ9NYF5 915 aa8.36□□□□□ -1.07
HERC4-211ENST00000492996 NSFL1CQ9UNZ2 370 aaKnown RBP8.36□□□□□ -1.07
HERC4-211ENST00000492996 XDHP47989 1333 aa8.35□□□□□ -1.07
HERC4-211ENST00000492996 CCDC171Q6TFL3 1326 aa8.35□□□□□ -1.07
HERC4-211ENST00000492996 EPHX2P34913 555 aa8.35□□□□□ -1.07
HERC4-211ENST00000492996 RFX5P48382 616 aaPredicted RBP8.35□□□□□ -1.07
HERC4-211ENST00000492996 INHBEP58166 350 aa8.35□□□□□ -1.07
HERC4-211ENST00000492996 TNNI3KQ59H18 835 aa8.35□□□□□ -1.07
HERC4-211ENST00000492996 DDX46Q7L014 1031 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms