RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 HDLBPQ00341 1268 aaKnown RBP17.09■□□□□ 0.33
CCM2-217ENST00000492883 PI16Q6UXB8 463 aa17.09■□□□□ 0.33
CCM2-217ENST00000492883 KRT26Q7Z3Y9 468 aa17.09■□□□□ 0.33
CCM2-217ENST00000492883 SULF1Q8IWU6 871 aa17.09■□□□□ 0.33
CCM2-217ENST00000492883 MTMR14Q8NCE2 650 aa17.09■□□□□ 0.33
CCM2-217ENST00000492883 TEKT1Q969V4 418 aa17.09■□□□□ 0.33
CCM2-217ENST00000492883 PRMT6Q96LA8 375 aaPredicted RBP17.09■□□□□ 0.33
CCM2-217ENST00000492883 MRIQ9BWK5 157 aa17.09■□□□□ 0.33
CCM2-217ENST00000492883 GLIS2Q9BZE0 524 aaPredicted RBP17.09■□□□□ 0.33
CCM2-217ENST00000492883 PCDHAC2Q9Y5I4 1007 aa17.09■□□□□ 0.33
CCM2-217ENST00000492883 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.32
CCM2-217ENST00000492883 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
CCM2-217ENST00000492883 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
CCM2-217ENST00000492883 HSPA6P17066 643 aa17.08■□□□□ 0.32
CCM2-217ENST00000492883 TBC1D9Q6ZT07 1266 aa17.08■□□□□ 0.32
CCM2-217ENST00000492883 ERICH6Q7L0X2 663 aa17.08■□□□□ 0.32
CCM2-217ENST00000492883 GCC1Q96CN9 775 aa17.08■□□□□ 0.32
CCM2-217ENST00000492883 ZBED3Q96IU2 234 aaPredicted RBP17.08■□□□□ 0.32
CCM2-217ENST00000492883 TRAF5O00463 557 aa17.07■□□□□ 0.32
CCM2-217ENST00000492883 ANKRD45Q5TZF3 282 aa17.07■□□□□ 0.32
CCM2-217ENST00000492883 DZIP1Q86YF9 867 aaKnown RBP17.07■□□□□ 0.32
CCM2-217ENST00000492883 LRP2BPQ9P2M1 347 aa17.07■□□□□ 0.32
CCM2-217ENST00000492883 CLRN2A0PK11 232 aa17.06■□□□□ 0.32
CCM2-217ENST00000492883 ZAP70P43403 619 aa17.06■□□□□ 0.32
CCM2-217ENST00000492883 APLP1P51693 650 aa17.06■□□□□ 0.32
CCM2-217ENST00000492883 HHIPL2Q6UWX4 724 aa17.06■□□□□ 0.32
CCM2-217ENST00000492883 SLF2Q8IX21 1173 aa17.06■□□□□ 0.32
CCM2-217ENST00000492883 RAI14Q9P0K7 980 aa17.06■□□□□ 0.32
CCM2-217ENST00000492883 PASKQ96RG2 1323 aa17.05■□□□□ 0.32
CCM2-217ENST00000492883 PITPNM2Q9BZ72 1349 aa17.05■□□□□ 0.32
CCM2-217ENST00000492883 ADM5C9JUS6 153 aa17.05■□□□□ 0.32
CCM2-217ENST00000492883 IGHDP01880 384 aa17.05■□□□□ 0.32
CCM2-217ENST00000492883 CYP2E1P05181 493 aaPredicted RBP17.05■□□□□ 0.32
CCM2-217ENST00000492883 FMR1Q06787 632 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCM2-217ENST00000492883 DIXDC1Q155Q3 683 aa17.05■□□□□ 0.32
CCM2-217ENST00000492883 ZDHHC15Q96MV8 337 aa17.05■□□□□ 0.32
CCM2-217ENST00000492883 TDRD3Q9H7E2 651 aaKnown RBP17.05■□□□□ 0.32
CCM2-217ENST00000492883 VEZTQ9HBM0 779 aa17.05■□□□□ 0.32
CCM2-217ENST00000492883 SCAF8Q9UPN6 1271 aaKnown RBP17.05■□□□□ 0.32
CCM2-217ENST00000492883 MECOMQ03112 1051 aa17.04■□□□□ 0.32
CCM2-217ENST00000492883 DLK2Q6UY11 383 aa17.04■□□□□ 0.32
CCM2-217ENST00000492883 APOBEC3FQ8IUX4 373 aaKnown RBP17.04■□□□□ 0.32
CCM2-217ENST00000492883 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
CCM2-217ENST00000492883 ZNF408Q9H9D4 720 aa17.04■□□□□ 0.32
CCM2-217ENST00000492883 ATP5JP18859 108 aa17.03■□□□□ 0.32
CCM2-217ENST00000492883 GSTO1P78417 241 aa17.03■□□□□ 0.32
CCM2-217ENST00000492883 B4GALNT3Q6L9W6 998 aa17.03■□□□□ 0.32
CCM2-217ENST00000492883 APOBEC3HQ6NTF7 200 aaKnown RBP17.03■□□□□ 0.32
CCM2-217ENST00000492883 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCM2-217ENST00000492883 BOLA2Q9H3K6 86 aa17.03■□□□□ 0.32
CCM2-217ENST00000492883 ZNF70Q9UC06 446 aaPredicted RBP17.03■□□□□ 0.32
CCM2-217ENST00000492883 DAGLAQ9Y4D2 1042 aa17.03■□□□□ 0.32
CCM2-217ENST00000492883 NDUFB9Q9Y6M9 179 aa17.03■□□□□ 0.32
CCM2-217ENST00000492883 TMEM88BA6NKF7 163 aa17.02■□□□□ 0.32
CCM2-217ENST00000492883 CELF2O95319 508 aaKnown RBP17.02■□□□□ 0.32
CCM2-217ENST00000492883 LDHCP07864 332 aa17.02■□□□□ 0.32
CCM2-217ENST00000492883 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
CCM2-217ENST00000492883 SMC5Q8IY18 1101 aa17.02■□□□□ 0.32
CCM2-217ENST00000492883 DNAJC2Q99543 621 aaKnown RBP17.02■□□□□ 0.32
CCM2-217ENST00000492883 PIH1D3Q9NQM4 214 aaKnown RBP17.02■□□□□ 0.32
CCM2-217ENST00000492883 ECHDC1Q9NTX5 307 aa17.02■□□□□ 0.32
CCM2-217ENST00000492883 TMOD2Q9NZR1 351 aa17.02■□□□□ 0.32
CCM2-217ENST00000492883 PSME4Q14997 1843 aa17.02■□□□□ 0.31
CCM2-217ENST00000492883 ADAMTSL1Q8N6G6 1762 aa17.02■□□□□ 0.31
CCM2-217ENST00000492883 AOX1Q06278 1338 aa17.01■□□□□ 0.31
CCM2-217ENST00000492883 IDH1O75874 414 aaKnown RBP17.01■□□□□ 0.31
CCM2-217ENST00000492883 TTF1Q15361 905 aaPredicted RBP17.01■□□□□ 0.31
CCM2-217ENST00000492883 PRAMEF18Q5VWM3 479 aa17.01■□□□□ 0.31
CCM2-217ENST00000492883 NAA16Q6N069 864 aaPredicted RBP17.01■□□□□ 0.31
CCM2-217ENST00000492883 NSUN4Q96CB9 384 aaKnown RBP17.01■□□□□ 0.31
CCM2-217ENST00000492883 DEFB129Q9H1M3 183 aa17.01■□□□□ 0.31
CCM2-217ENST00000492883 ANTXR1Q9H6X2 564 aa17.01■□□□□ 0.31
CCM2-217ENST00000492883 ARAP2Q8WZ64 1704 aa17.01■□□□□ 0.31
CCM2-217ENST00000492883 TCP10L2B9ZVM9 353 aa17■□□□□ 0.31
CCM2-217ENST00000492883 GOLIM4O00461 696 aa17■□□□□ 0.31
CCM2-217ENST00000492883 NEFLP07196 543 aa17■□□□□ 0.31
CCM2-217ENST00000492883 HTRA3P83110 453 aa17■□□□□ 0.31
CCM2-217ENST00000492883 MAP3K12Q12852 859 aa17■□□□□ 0.31
CCM2-217ENST00000492883 TNFAIP1Q13829 316 aa17■□□□□ 0.31
CCM2-217ENST00000492883 CST9Q5W186 159 aa17■□□□□ 0.31
CCM2-217ENST00000492883 CDCA5Q96FF9 252 aa17■□□□□ 0.31
CCM2-217ENST00000492883 FAM163AQ96GL9 167 aaPredicted RBP17■□□□□ 0.31
CCM2-217ENST00000492883 CREBZFQ9NS37 354 aa17■□□□□ 0.31
CCM2-217ENST00000492883 USP40Q9NVE5 1235 aa17■□□□□ 0.31
CCM2-217ENST00000492883 IGSF3O75054 1194 aa16.99■□□□□ 0.31
CCM2-217ENST00000492883 TNNI2P48788 182 aa16.99■□□□□ 0.31
CCM2-217ENST00000492883 CACNB3P54284 484 aa16.99■□□□□ 0.31
CCM2-217ENST00000492883 RASA3Q14644 834 aa16.99■□□□□ 0.31
CCM2-217ENST00000492883 CDC42EP5Q6NZY7 148 aa16.99■□□□□ 0.31
CCM2-217ENST00000492883 HAUS7Q99871 368 aa16.99■□□□□ 0.31
CCM2-217ENST00000492883 NOL10Q9BSC4 688 aaKnown RBP16.99■□□□□ 0.31
CCM2-217ENST00000492883 LNPKQ9C0E8 428 aa16.99■□□□□ 0.31
CCM2-217ENST00000492883 ABT1Q9ULW3 272 aaKnown RBP16.99■□□□□ 0.31
CCM2-217ENST00000492883 MROH7-TTC4A0A0A0MT08 1334 aa16.98■□□□□ 0.31
CCM2-217ENST00000492883 GAKO14976 1311 aa16.98■□□□□ 0.31
CCM2-217ENST00000492883 ZNF646O15015 1829 aaPredicted RBP16.98■□□□□ 0.31
CCM2-217ENST00000492883 ERC2O15083 957 aa16.98■□□□□ 0.31
CCM2-217ENST00000492883 NF2P35240 595 aa16.98■□□□□ 0.31
CCM2-217ENST00000492883 BTDP43251 543 aa16.98■□□□□ 0.31
CCM2-217ENST00000492883 TSHZ3Q63HK5 1081 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms