RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 RHOQP17081 205 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 CCDC144BQ3MJ40 725 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 MEI1Q5TIA1 1274 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 EFCAB2Q5VUJ9 269 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 CRBNQ96SW2 442 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 NOC4LQ9BVI4 516 aaKnown RBP4.29□□□□□ -1.72
SNX13-209ENST00000492626 SLKQ9H2G2 1235 aaPredicted RBP4.29□□□□□ -1.72
SNX13-209ENST00000492626 BRD7Q9NPI1 651 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 STRIP2Q9ULQ0 834 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 FCGRTP55899 365 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 NFX1Q12986 1120 aaKnown RBP4.29□□□□□ -1.72
SNX13-209ENST00000492626 BMS1Q14692 1282 aaKnown RBP4.29□□□□□ -1.72
SNX13-209ENST00000492626 GALNT12Q8IXK2 581 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 RBSNQ9H1K0 784 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 C11orf16Q9NQ32 467 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 MINDY4BA8MYZ0 360 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 SPATA31C2B4DYI2 1134 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 PIP4K2BP78356 416 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 HNRNPUQ00839 825 aaKnown RBP eCLIP4.29□□□□□ -1.72
SNX13-209ENST00000492626 GAS2L1Q99501 681 aaPredicted RBP4.29□□□□□ -1.72
SNX13-209ENST00000492626 PPM1HQ9ULR3 514 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 USP20Q9Y2K6 914 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 HSPA6P17066 643 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 INPP5BP32019 993 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 PTPN12Q05209 780 aaKnown RBP4.29□□□□□ -1.72
SNX13-209ENST00000492626 SNAP47Q5SQN1 464 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 RNF187Q5TA31 235 aaPredicted RBP4.29□□□□□ -1.72
SNX13-209ENST00000492626 USPL1Q5W0Q7 1092 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 GCC1Q96CN9 775 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 SEC16BQ96JE7 1060 aa4.29□□□□□ -1.72
SNX13-209ENST00000492626 V9GY48 417 aaPredicted RBP4.29□□□□□ -1.72
SNX13-209ENST00000492626 A2MP01023 1474 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 TNFRSF10AO00220 468 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 NBPF6Q5VWK0 638 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 ZNF280CQ8ND82 737 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 NBPF4Q96M43 638 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 GMLQ99445 158 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 OXCT2Q9BYC2 517 aaPredicted RBP4.28□□□□□ -1.72
SNX13-209ENST00000492626 KCNH4Q9UQ05 1017 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 EHBP1L1Q8N3D4 1523 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 J3QL48 77 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 RARAP10276 462 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 MSX1P28360 303 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 HYAL2Q12891 473 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 FAM26DQ5JW98 314 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 PI16Q6UXB8 463 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 NUP153P49790 1475 aaKnown RBP4.28□□□□□ -1.72
SNX13-209ENST00000492626 CLIP1P30622 1438 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 PPP1R12AO14974 1030 aaPredicted RBP4.28□□□□□ -1.72
SNX13-209ENST00000492626 MAP3K11Q16584 847 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 MEX3CQ5U5Q3 659 aaKnown RBP4.28□□□□□ -1.72
SNX13-209ENST00000492626 KRT25Q7Z3Z0 450 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 OSBPL7Q9BZF2 842 aa4.28□□□□□ -1.72
SNX13-209ENST00000492626 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.27□□□□□ -1.73
SNX13-209ENST00000492626 ARHGEF5Q12774 1597 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 CTSHP09668 335 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 HMGB2P26583 209 aaKnown RBP4.27□□□□□ -1.73
SNX13-209ENST00000492626 IRS1P35568 1242 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 BAG6P46379 1132 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 ZIC5Q96T25 663 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 RSRP1Q9BUV0 290 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 KBTBD4Q9NVX7 518 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 TULP4Q9NRJ4 1543 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 MAST1Q9Y2H9 1570 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 MIA2Q96PC5 1412 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 FIGNL2A6NMB9 653 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 EREGO14944 169 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 ATF4P18848 351 aaPredicted RBP4.27□□□□□ -1.73
SNX13-209ENST00000492626 NASPP49321 788 aaPredicted RBP4.27□□□□□ -1.73
SNX13-209ENST00000492626 ANAPC15P60006 121 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 COL9A2Q14055 689 aaPredicted RBP4.27□□□□□ -1.73
SNX13-209ENST00000492626 RIPOR1Q6ZS17 1223 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 CFHR5Q9BXR6 569 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 THSD7AQ9UPZ6 1657 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 TTLL8A6PVC2 850 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 KCNA6P17658 529 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 TYRO3Q06418 890 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 APOBRQ0VD83 1088 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 LCE2DQ5TA82 110 aaPredicted RBP4.27□□□□□ -1.73
SNX13-209ENST00000492626 FBXW10Q5XX13 1052 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 GIMAP6Q6P9H5 292 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 KDF1Q8NAX2 398 aaPredicted RBP4.27□□□□□ -1.73
SNX13-209ENST00000492626 ZCRB1Q8TBF4 217 aaKnown RBP4.27□□□□□ -1.73
SNX13-209ENST00000492626 DDX54Q8TDD1 881 aaKnown RBP4.27□□□□□ -1.73
SNX13-209ENST00000492626 GPN3Q9UHW5 284 aaPredicted RBP4.27□□□□□ -1.73
SNX13-209ENST00000492626 BCS1LQ9Y276 419 aa4.27□□□□□ -1.73
SNX13-209ENST00000492626 SUPT16HQ9Y5B9 1047 aaKnown RBP4.27□□□□□ -1.73
SNX13-209ENST00000492626 TLDC2A0PJX2 215 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 F11P03951 625 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 PPP2R3AQ06190 1150 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 CCINQ13939 588 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 SDE2Q6IQ49 451 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 NLRP8Q86W28 1048 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 C1orf127Q8N9H9 656 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 KIF1AQ12756 1690 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 NALCNQ8IZF0 1738 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 BPNT1O95861 308 aa4.26□□□□□ -1.73
SNX13-209ENST00000492626 EIF4A3P38919 411 aaKnown RBP4.26□□□□□ -1.73
SNX13-209ENST00000492626 CTSOP43234 321 aaPredicted RBP4.26□□□□□ -1.73
SNX13-209ENST00000492626 CHMP4BP1P59074 171 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms