RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 MECOMQ03112 1051 aa16.44■□□□□ 0.22
PTPRE-210ENST00000492479 CHAF1AQ13111 956 aaPredicted RBP16.44■□□□□ 0.22
PTPRE-210ENST00000492479 MFSD14BQ5SR56 506 aa16.44■□□□□ 0.22
PTPRE-210ENST00000492479 KIAA1211Q6ZU35 1233 aa16.44■□□□□ 0.22
PTPRE-210ENST00000492479 CERS3Q8IU89 383 aa16.44■□□□□ 0.22
PTPRE-210ENST00000492479 IL27Q8NEV9 243 aa16.44■□□□□ 0.22
PTPRE-210ENST00000492479 SEC62Q99442 399 aaKnown RBP16.44■□□□□ 0.22
PTPRE-210ENST00000492479 MRIQ9BWK5 157 aa16.44■□□□□ 0.22
PTPRE-210ENST00000492479 PUS7LQ9H0K6 701 aaKnown RBP16.44■□□□□ 0.22
PTPRE-210ENST00000492479 ANO2Q9NQ90 1003 aa16.44■□□□□ 0.22
PTPRE-210ENST00000492479 BCS1LQ9Y276 419 aa16.44■□□□□ 0.22
PTPRE-210ENST00000492479 MYH2Q9UKX2 1941 aa16.44■□□□□ 0.22
PTPRE-210ENST00000492479 HSPA4P34932 840 aa16.43■□□□□ 0.22
PTPRE-210ENST00000492479 GTF2IP78347 998 aa16.43■□□□□ 0.22
PTPRE-210ENST00000492479 GSTO1P78417 241 aa16.43■□□□□ 0.22
PTPRE-210ENST00000492479 DOK7Q18PE1 504 aa16.43■□□□□ 0.22
PTPRE-210ENST00000492479 DACT2Q5SW24 774 aa16.43■□□□□ 0.22
PTPRE-210ENST00000492479 TTLL5Q6EMB2 1281 aa16.43■□□□□ 0.22
PTPRE-210ENST00000492479 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
PTPRE-210ENST00000492479 RAI14Q9P0K7 980 aa16.43■□□□□ 0.22
PTPRE-210ENST00000492479 RBM19Q9Y4C8 960 aaKnown RBP16.43■□□□□ 0.22
PTPRE-210ENST00000492479 SBF1O95248 1867 aa16.43■□□□□ 0.22
PTPRE-210ENST00000492479 GAKO14976 1311 aa16.43■□□□□ 0.22
PTPRE-210ENST00000492479 USP17L3A6NCW0 530 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 USP17L4A6NCW7 530 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 YDJCA8MPS7 323 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 FOXP2O15409 715 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 GPAA1O43292 621 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 PTH1RQ03431 593 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 SLFNL1Q499Z3 407 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 NAA16Q6N069 864 aaPredicted RBP16.42■□□□□ 0.22
PTPRE-210ENST00000492479 USP17L1Q7RTZ2 530 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 CERS5Q8N5B7 392 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 STRBPQ96SI9 672 aaKnown RBP16.42■□□□□ 0.22
PTPRE-210ENST00000492479 RIOK1Q9BRS2 568 aaKnown RBP16.42■□□□□ 0.22
PTPRE-210ENST00000492479 DBNDD1Q9H9R9 158 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 ZNF277Q9NRM2 450 aaPredicted RBP16.42■□□□□ 0.22
PTPRE-210ENST00000492479 LAMA4Q16363 1823 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 MYO3BQ8WXR4 1341 aa16.42■□□□□ 0.22
PTPRE-210ENST00000492479 GNAT2P19087 354 aa16.41■□□□□ 0.22
PTPRE-210ENST00000492479 CYP7A1P22680 504 aa16.41■□□□□ 0.22
PTPRE-210ENST00000492479 PPP4CP60510 307 aa16.41■□□□□ 0.22
PTPRE-210ENST00000492479 HDLBPQ00341 1268 aaKnown RBP16.41■□□□□ 0.22
PTPRE-210ENST00000492479 NECTIN1Q15223 517 aa16.41■□□□□ 0.22
PTPRE-210ENST00000492479 ALX1Q15699 326 aa16.41■□□□□ 0.22
PTPRE-210ENST00000492479 TSGA10IPQ3SY00 556 aa16.41■□□□□ 0.22
PTPRE-210ENST00000492479 ADGRA1Q86SQ6 560 aa16.41■□□□□ 0.22
PTPRE-210ENST00000492479 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
PTPRE-210ENST00000492479 LARGE2Q8N3Y3 721 aa16.41■□□□□ 0.22
PTPRE-210ENST00000492479 KIF2CQ99661 725 aa16.41■□□□□ 0.22
PTPRE-210ENST00000492479 ZNRF3Q9ULT6 936 aa16.41■□□□□ 0.22
PTPRE-210ENST00000492479 G3V3G9 751 aa16.4■□□□□ 0.22
PTPRE-210ENST00000492479 LDHCP07864 332 aa16.4■□□□□ 0.22
PTPRE-210ENST00000492479 HSPD1P10809 573 aaKnown RBP16.4■□□□□ 0.22
PTPRE-210ENST00000492479 MCCP23508 829 aa16.4■□□□□ 0.22
PTPRE-210ENST00000492479 MMP14P50281 582 aa16.4■□□□□ 0.22
PTPRE-210ENST00000492479 GRIK5Q16478 980 aa16.4■□□□□ 0.22
PTPRE-210ENST00000492479 DCAF8Q5TAQ9 597 aa16.4■□□□□ 0.22
PTPRE-210ENST00000492479 CCDC129Q6ZRS4 1044 aa16.4■□□□□ 0.22
PTPRE-210ENST00000492479 DZIP1Q86YF9 867 aaKnown RBP16.4■□□□□ 0.22
PTPRE-210ENST00000492479 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
PTPRE-210ENST00000492479 MROH7-TTC4A0A0A0MT08 1334 aa16.4■□□□□ 0.22
PTPRE-210ENST00000492479 FOCADQ5VW36 1801 aa16.4■□□□□ 0.22
PTPRE-210ENST00000492479 GPR75-ASB3A0A0A6YYF3 556 aa16.39■□□□□ 0.21
PTPRE-210ENST00000492479 VIL1P09327 827 aaKnown RBP16.39■□□□□ 0.21
PTPRE-210ENST00000492479 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
PTPRE-210ENST00000492479 HHIPL2Q6UWX4 724 aa16.39■□□□□ 0.21
PTPRE-210ENST00000492479 NIM1KQ8IY84 436 aa16.39■□□□□ 0.21
PTPRE-210ENST00000492479 AIDAQ96BJ3 306 aa16.39■□□□□ 0.21
PTPRE-210ENST00000492479 GMLQ99445 158 aa16.39■□□□□ 0.21
PTPRE-210ENST00000492479 RBM8AQ9Y5S9 174 aaKnown RBP16.39■□□□□ 0.21
PTPRE-210ENST00000492479 CDK5RAP2Q96SN8 1893 aa16.39■□□□□ 0.21
PTPRE-210ENST00000492479 MBD4O95243 580 aa16.38■□□□□ 0.21
PTPRE-210ENST00000492479 KCNQ5Q9NR82 932 aa16.38■□□□□ 0.21
PTPRE-210ENST00000492479 JAG2Q9Y219 1238 aa16.38■□□□□ 0.21
PTPRE-210ENST00000492479 DDX60LQ5H9U9 1706 aaKnown RBP16.37■□□□□ 0.21
PTPRE-210ENST00000492479 MAGEB6P1A0A0J9YX57 407 aa16.37■□□□□ 0.21
PTPRE-210ENST00000492479 PATL2C9JE40 543 aaKnown RBP16.37■□□□□ 0.21
PTPRE-210ENST00000492479 FZD9O00144 591 aa16.37■□□□□ 0.21
PTPRE-210ENST00000492479 PRELPP51888 382 aa16.37■□□□□ 0.21
PTPRE-210ENST00000492479 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
PTPRE-210ENST00000492479 LCORLQ8N3X6 602 aa16.37■□□□□ 0.21
PTPRE-210ENST00000492479 CTNNA3Q9UI47 895 aa16.37■□□□□ 0.21
PTPRE-210ENST00000492479 TIAM2Q8IVF5 1701 aa16.36■□□□□ 0.21
PTPRE-210ENST00000492479 BAG3O95817 575 aa16.36■□□□□ 0.21
PTPRE-210ENST00000492479 RNF20Q5VTR2 975 aa16.36■□□□□ 0.21
PTPRE-210ENST00000492479 CREB3L3Q68CJ9 461 aa16.36■□□□□ 0.21
PTPRE-210ENST00000492479 RSBN1LQ6PCB5 846 aaPredicted RBP16.36■□□□□ 0.21
PTPRE-210ENST00000492479 AGBL3Q8NEM8 1001 aa16.36■□□□□ 0.21
PTPRE-210ENST00000492479 JDP2Q8WYK2 163 aa16.36■□□□□ 0.21
PTPRE-210ENST00000492479 TM6SF1Q9BZW5 370 aa16.36■□□□□ 0.21
PTPRE-210ENST00000492479 SERPINA10Q9UK55 444 aa16.36■□□□□ 0.21
PTPRE-210ENST00000492479 GOLGB1Q14789 3259 aaKnown RBP16.36■□□□□ 0.21
PTPRE-210ENST00000492479 ECM29Q5VYK3 1845 aa16.35■□□□□ 0.21
PTPRE-210ENST00000492479 GSG1L2A8MUP6 293 aa16.35■□□□□ 0.21
PTPRE-210ENST00000492479 PLCG2P16885 1265 aa16.35■□□□□ 0.21
PTPRE-210ENST00000492479 LMNB1P20700 586 aa16.35■□□□□ 0.21
PTPRE-210ENST00000492479 RASSF7Q02833 373 aa16.35■□□□□ 0.21
PTPRE-210ENST00000492479 RABEP1Q15276 862 aa16.35■□□□□ 0.21
PTPRE-210ENST00000492479 DIXDC1Q155Q3 683 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms