RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 TEPSINQ96N21 525 aa15.83■□□□□ 0.12
TREX1-204ENST00000492235 TMEM39BQ9GZU3 492 aa15.83■□□□□ 0.12
TREX1-204ENST00000492235 C9orf78Q9NZ63 289 aaPredicted RBP15.83■□□□□ 0.12
TREX1-204ENST00000492235 KIAA0100Q14667 2235 aaKnown RBP15.82■□□□□ 0.12
TREX1-204ENST00000492235 CCL15-CCL14A0A0B4J2E2 113 aa15.82■□□□□ 0.12
TREX1-204ENST00000492235 CRKP46108 304 aa15.82■□□□□ 0.12
TREX1-204ENST00000492235 VGLL4Q14135 290 aa15.82■□□□□ 0.12
TREX1-204ENST00000492235 UBE4AQ14139 1066 aa15.82■□□□□ 0.12
TREX1-204ENST00000492235 TAF1CQ15572 869 aaPredicted RBP15.82■□□□□ 0.12
TREX1-204ENST00000492235 CCL15Q16663 113 aa15.82■□□□□ 0.12
TREX1-204ENST00000492235 BRI3BPQ8WY22 251 aa15.82■□□□□ 0.12
TREX1-204ENST00000492235 FAM84BQ96KN1 310 aaPredicted RBP15.82■□□□□ 0.12
TREX1-204ENST00000492235 PUS3Q9BZE2 481 aaKnown RBP15.82■□□□□ 0.12
TREX1-204ENST00000492235 BRCA2P51587 3418 aa15.81■□□□□ 0.12
TREX1-204ENST00000492235 TNNI2P48788 182 aa15.81■□□□□ 0.12
TREX1-204ENST00000492235 MAP3K9P80192 1104 aa15.81■□□□□ 0.12
TREX1-204ENST00000492235 GRIK5Q16478 980 aa15.81■□□□□ 0.12
TREX1-204ENST00000492235 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
TREX1-204ENST00000492235 OTUD5Q96G74 571 aa15.81■□□□□ 0.12
TREX1-204ENST00000492235 TMEM106CQ9BVX2 250 aa15.81■□□□□ 0.12
TREX1-204ENST00000492235 ZFYVE28Q9HCC9 887 aa15.81■□□□□ 0.12
TREX1-204ENST00000492235 PTCH2Q9Y6C5 1203 aa15.81■□□□□ 0.12
TREX1-204ENST00000492235 GTF2A2P52657 109 aa15.8■□□□□ 0.12
TREX1-204ENST00000492235 SLC9C1Q4G0N8 1177 aa15.8■□□□□ 0.12
TREX1-204ENST00000492235 SLC4A10Q6U841 1118 aa15.8■□□□□ 0.12
TREX1-204ENST00000492235 WDR63Q8IWG1 891 aa15.8■□□□□ 0.12
TREX1-204ENST00000492235 FAM43AQ8N2R8 423 aa15.8■□□□□ 0.12
TREX1-204ENST00000492235 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.8■□□□□ 0.12
TREX1-204ENST00000492235 ZNF333Q96JL9 665 aa15.8■□□□□ 0.12
TREX1-204ENST00000492235 IQSEC3Q9UPP2 1182 aaPredicted RBP15.8■□□□□ 0.12
TREX1-204ENST00000492235 CSADQ9Y600 493 aa15.8■□□□□ 0.12
TREX1-204ENST00000492235 MYCP01106 439 aaPredicted RBP15.79■□□□□ 0.12
TREX1-204ENST00000492235 CACNB3P54284 484 aa15.79■□□□□ 0.12
TREX1-204ENST00000492235 CHAF1AQ13111 956 aaPredicted RBP15.79■□□□□ 0.12
TREX1-204ENST00000492235 ARHGEF6Q15052 776 aa15.79■□□□□ 0.12
TREX1-204ENST00000492235 VPS37DQ86XT2 251 aa15.79■□□□□ 0.12
TREX1-204ENST00000492235 SUCLG2Q96I99 432 aa15.79■□□□□ 0.12
TREX1-204ENST00000492235 ZSWIM8A7E2V4 1837 aa15.79■□□□□ 0.12
TREX1-204ENST00000492235 ALDH1L1O75891 902 aa15.78■□□□□ 0.12
TREX1-204ENST00000492235 ZEB1P37275 1124 aaPredicted RBP15.78■□□□□ 0.12
TREX1-204ENST00000492235 NBPF11Q86T75 865 aa15.78■□□□□ 0.12
TREX1-204ENST00000492235 KAZALD1Q96I82 304 aa15.78■□□□□ 0.12
TREX1-204ENST00000492235 SRCIN1Q9C0H9 1055 aa15.78■□□□□ 0.12
TREX1-204ENST00000492235 SPINK5Q9NQ38 1064 aaPredicted RBP15.78■□□□□ 0.12
TREX1-204ENST00000492235 RIPOR2Q9Y4F9 1068 aa15.78■□□□□ 0.12
TREX1-204ENST00000492235 SPDYE5A6NIY4 337 aa15.77■□□□□ 0.12
TREX1-204ENST00000492235 FRAT2O75474 233 aaPredicted RBP15.77■□□□□ 0.12
TREX1-204ENST00000492235 SLC4A8Q2Y0W8 1093 aa15.77■□□□□ 0.12
TREX1-204ENST00000492235 FBXO33Q7Z6M2 555 aa15.77■□□□□ 0.12
TREX1-204ENST00000492235 MRS2Q9HD23 443 aa15.77■□□□□ 0.12
TREX1-204ENST00000492235 MROH5Q6ZUA9 1318 aa15.76■□□□□ 0.11
TREX1-204ENST00000492235 NBPF7P0C2Y1 421 aaPredicted RBP15.76■□□□□ 0.11
TREX1-204ENST00000492235 TEKT1Q969V4 418 aa15.76■□□□□ 0.11
TREX1-204ENST00000492235 WRNIP1Q96S55 665 aa15.76■□□□□ 0.11
TREX1-204ENST00000492235 ARHGAP39Q9C0H5 1083 aa15.76■□□□□ 0.11
TREX1-204ENST00000492235 SNCAIPQ9Y6H5 919 aa15.76■□□□□ 0.11
TREX1-204ENST00000492235 WDHD1O75717 1129 aaPredicted RBP15.75■□□□□ 0.11
TREX1-204ENST00000492235 ECM2O94769 699 aaPredicted RBP15.75■□□□□ 0.11
TREX1-204ENST00000492235 CETPP11597 493 aa15.75■□□□□ 0.11
TREX1-204ENST00000492235 HDLBPQ00341 1268 aaKnown RBP15.75■□□□□ 0.11
TREX1-204ENST00000492235 LRRC24Q50LG9 513 aa15.75■□□□□ 0.11
TREX1-204ENST00000492235 CAVIN4Q5BKX8 364 aa15.75■□□□□ 0.11
TREX1-204ENST00000492235 METTL24Q5JXM2 366 aa15.75■□□□□ 0.11
TREX1-204ENST00000492235 ERO1BQ86YB8 467 aa15.75■□□□□ 0.11
TREX1-204ENST00000492235 SH3TC2Q8TF17 1288 aa15.75■□□□□ 0.11
TREX1-204ENST00000492235 TBC1D22AQ8WUA7 517 aa15.75■□□□□ 0.11
TREX1-204ENST00000492235 ZKSCAN4Q969J2 545 aaPredicted RBP15.75■□□□□ 0.11
TREX1-204ENST00000492235 BICC1Q9H694 974 aaKnown RBP15.75■□□□□ 0.11
TREX1-204ENST00000492235 TMOD2Q9NZR1 351 aa15.75■□□□□ 0.11
TREX1-204ENST00000492235 BTBD19C9JJ37 291 aa15.74■□□□□ 0.11
TREX1-204ENST00000492235 IRF6O14896 467 aa15.74■□□□□ 0.11
TREX1-204ENST00000492235 TLR2O60603 784 aa15.74■□□□□ 0.11
TREX1-204ENST00000492235 FXR1P51114 621 aaKnown RBP eCLIP15.74■□□□□ 0.11
TREX1-204ENST00000492235 LACTBP83111 547 aaPredicted RBP15.74■□□□□ 0.11
TREX1-204ENST00000492235 KIF22Q14807 665 aa15.74■□□□□ 0.11
TREX1-204ENST00000492235 BCAMP50895 628 aa15.73■□□□□ 0.11
TREX1-204ENST00000492235 SNAPC2Q13487 334 aa15.73■□□□□ 0.11
TREX1-204ENST00000492235 FAM83AQ86UY5 434 aa15.73■□□□□ 0.11
TREX1-204ENST00000492235 ZDHHC15Q96MV8 337 aa15.73■□□□□ 0.11
TREX1-204ENST00000492235 COLQQ9Y215 455 aaPredicted RBP15.73■□□□□ 0.11
TREX1-204ENST00000492235 UTYO14607 1347 aa15.72■□□□□ 0.11
TREX1-204ENST00000492235 PDE8BO95263 885 aa15.72■□□□□ 0.11
TREX1-204ENST00000492235 PPIL2Q13356 520 aa15.72■□□□□ 0.11
TREX1-204ENST00000492235 APOBEC3HQ6NTF7 200 aaKnown RBP15.72■□□□□ 0.11
TREX1-204ENST00000492235 MIGA2Q7L4E1 593 aa15.72■□□□□ 0.11
TREX1-204ENST00000492235 VGLL2Q8N8G2 317 aa15.72■□□□□ 0.11
TREX1-204ENST00000492235 HOOK2Q96ED9 719 aa15.72■□□□□ 0.11
TREX1-204ENST00000492235 ZCCHC17Q9NP64 241 aaKnown RBP15.72■□□□□ 0.11
TREX1-204ENST00000492235 RABL6Q3YEC7 729 aaPredicted RBP15.71■□□□□ 0.11
TREX1-204ENST00000492235 FKBP1CQ5VVH2 108 aa15.71■□□□□ 0.11
TREX1-204ENST00000492235 DCAF15Q66K64 600 aa15.71■□□□□ 0.11
TREX1-204ENST00000492235 ANKRD44Q8N8A2 993 aa15.71■□□□□ 0.11
TREX1-204ENST00000492235 KLHDC4Q8TBB5 520 aa15.71■□□□□ 0.11
TREX1-204ENST00000492235 MAST3O60307 1309 aa15.7■□□□□ 0.1
TREX1-204ENST00000492235 MYH13Q9UKX3 1938 aa15.7■□□□□ 0.1
TREX1-204ENST00000492235 H0YGN5 161 aa15.7■□□□□ 0.1
TREX1-204ENST00000492235 INPP5BP32019 993 aa15.7■□□□□ 0.1
TREX1-204ENST00000492235 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.7■□□□□ 0.1
TREX1-204ENST00000492235 MRIQ9BWK5 157 aa15.7■□□□□ 0.1
TREX1-204ENST00000492235 ZNF341Q9BYN7 854 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms