RNA–Protein interactions for RNA: ENST00000491651.1

SMARCD3-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 4

Gene SMARCD3, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-214ENST00000491651 VEZTQ9HBM0 779 aa21.67■■□□□ 1.06
SMARCD3-214ENST00000491651 DENND2AQ9ULE3 1009 aa21.67■■□□□ 1.06
SMARCD3-214ENST00000491651 CTCFP49711 727 aaPredicted RBP21.66■■□□□ 1.06
SMARCD3-214ENST00000491651 ZNF157P51786 506 aaPredicted RBP21.66■■□□□ 1.06
SMARCD3-214ENST00000491651 ATP8B2P98198 1209 aa21.66■■□□□ 1.06
SMARCD3-214ENST00000491651 TNFAIP1Q13829 316 aa21.66■■□□□ 1.06
SMARCD3-214ENST00000491651 TTLL12Q14166 644 aaPredicted RBP21.66■■□□□ 1.06
SMARCD3-214ENST00000491651 POLA2Q14181 598 aa21.66■■□□□ 1.06
SMARCD3-214ENST00000491651 SPDYE2Q495Y8 402 aa21.66■■□□□ 1.06
SMARCD3-214ENST00000491651 PRAMEF18Q5VWM3 479 aa21.66■■□□□ 1.06
SMARCD3-214ENST00000491651 PANK1Q8TE04 598 aa21.66■■□□□ 1.06
SMARCD3-214ENST00000491651 SSH3Q8TE77 659 aa21.66■■□□□ 1.06
SMARCD3-214ENST00000491651 C1orf115Q9H7X2 142 aa21.66■■□□□ 1.06
SMARCD3-214ENST00000491651 PHKA1P46020 1223 aa21.65■■□□□ 1.06
SMARCD3-214ENST00000491651 MVPQ14764 893 aaKnown RBP21.65■■□□□ 1.06
SMARCD3-214ENST00000491651 GRIK5Q16478 980 aa21.65■■□□□ 1.06
SMARCD3-214ENST00000491651 MRIQ9BWK5 157 aa21.65■■□□□ 1.06
SMARCD3-214ENST00000491651 OTOFQ9HC10 1997 aa21.65■■□□□ 1.06
SMARCD3-214ENST00000491651 LAMB1P07942 1786 aa21.64■■□□□ 1.06
SMARCD3-214ENST00000491651 SALL1Q9NSC2 1324 aa21.64■■□□□ 1.05
SMARCD3-214ENST00000491651 SLC10A3P09131 477 aa21.64■■□□□ 1.05
SMARCD3-214ENST00000491651 ADORA1P30542 326 aa21.64■■□□□ 1.05
SMARCD3-214ENST00000491651 CCDC102BQ68D86 513 aa21.64■■□□□ 1.05
SMARCD3-214ENST00000491651 ARMC9Q7Z3E5 817 aa21.64■■□□□ 1.05
SMARCD3-214ENST00000491651 ZNF70Q9UC06 446 aaPredicted RBP21.64■■□□□ 1.05
SMARCD3-214ENST00000491651 AOX1Q06278 1338 aa21.63■■□□□ 1.05
SMARCD3-214ENST00000491651 PDS5AQ29RF7 1337 aaKnown RBP21.63■■□□□ 1.05
SMARCD3-214ENST00000491651 FAM155AB1AL88 458 aaPredicted RBP21.63■■□□□ 1.05
SMARCD3-214ENST00000491651 TIMM10P62072 90 aa21.63■■□□□ 1.05
SMARCD3-214ENST00000491651 OS9Q13438 667 aaPredicted RBP21.63■■□□□ 1.05
SMARCD3-214ENST00000491651 COL13A1Q5TAT6 717 aaPredicted RBP21.63■■□□□ 1.05
SMARCD3-214ENST00000491651 ZGPATQ8N5A5 531 aaKnown RBP21.63■■□□□ 1.05
SMARCD3-214ENST00000491651 XAGE2Q96GT9 111 aa21.63■■□□□ 1.05
SMARCD3-214ENST00000491651 ZDHHC15Q96MV8 337 aa21.63■■□□□ 1.05
SMARCD3-214ENST00000491651 TDRD3Q9H7E2 651 aaKnown RBP21.63■■□□□ 1.05
SMARCD3-214ENST00000491651 CA12O43570 354 aa21.62■■□□□ 1.05
SMARCD3-214ENST00000491651 TNNI2P48788 182 aa21.62■■□□□ 1.05
SMARCD3-214ENST00000491651 SUPT20HL1Q3ZLR7 823 aa21.62■■□□□ 1.05
SMARCD3-214ENST00000491651 HHIPL2Q6UWX4 724 aa21.62■■□□□ 1.05
SMARCD3-214ENST00000491651 TMOD2Q9NZR1 351 aa21.62■■□□□ 1.05
SMARCD3-214ENST00000491651 DDX19BQ9UMR2 479 aa21.62■■□□□ 1.05
SMARCD3-214ENST00000491651 SSC5DA1L4H1 1573 aa21.61■■□□□ 1.05
SMARCD3-214ENST00000491651 MOB2Q70IA6 237 aa21.61■■□□□ 1.05
SMARCD3-214ENST00000491651 RASAL3Q86YV0 1011 aa21.61■■□□□ 1.05
SMARCD3-214ENST00000491651 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.61■■□□□ 1.05
SMARCD3-214ENST00000491651 NEUROD6Q96NK8 337 aa21.61■■□□□ 1.05
SMARCD3-214ENST00000491651 CHMP4BQ9H444 224 aaKnown RBP21.61■■□□□ 1.05
SMARCD3-214ENST00000491651 PRDM10Q9NQV6 1147 aa21.61■■□□□ 1.05
SMARCD3-214ENST00000491651 UBE2Q2LH0YL09 131 aa21.6■■□□□ 1.05
SMARCD3-214ENST00000491651 SURF6O75683 361 aaKnown RBP21.6■■□□□ 1.05
SMARCD3-214ENST00000491651 LDHBP07195 334 aaKnown RBP21.6■■□□□ 1.05
SMARCD3-214ENST00000491651 RASGRF1Q13972 1273 aa21.6■■□□□ 1.05
SMARCD3-214ENST00000491651 RASA3Q14644 834 aa21.6■■□□□ 1.05
SMARCD3-214ENST00000491651 GORABQ5T7V8 394 aa21.6■■□□□ 1.05
SMARCD3-214ENST00000491651 CEP85Q6P2H3 762 aa21.6■■□□□ 1.05
SMARCD3-214ENST00000491651 GPR108Q9NPR9 543 aa21.6■■□□□ 1.05
SMARCD3-214ENST00000491651 MAST2Q6P0Q8 1798 aa21.6■■□□□ 1.05
SMARCD3-214ENST00000491651 PPP1R12BO60237 982 aaPredicted RBP21.59■■□□□ 1.05
SMARCD3-214ENST00000491651 HSPA8P11142 646 aaKnown RBP21.59■■□□□ 1.05
SMARCD3-214ENST00000491651 PRDX5P30044 214 aa21.59■■□□□ 1.05
SMARCD3-214ENST00000491651 IFFO2Q5TF58 517 aa21.59■■□□□ 1.05
SMARCD3-214ENST00000491651 REM2Q8IYK8 340 aaPredicted RBP21.59■■□□□ 1.05
SMARCD3-214ENST00000491651 ANGEL1Q9UNK9 670 aaKnown RBP21.59■■□□□ 1.05
SMARCD3-214ENST00000491651 NOP58Q9Y2X3 529 aaKnown RBP21.59■■□□□ 1.05
SMARCD3-214ENST00000491651 CASP8AP2Q9UKL3 1982 aa21.59■■□□□ 1.05
SMARCD3-214ENST00000491651 PRKG1Q13976 671 aa21.58■■□□□ 1.05
SMARCD3-214ENST00000491651 COG6Q9Y2V7 657 aa21.58■■□□□ 1.05
SMARCD3-214ENST00000491651 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.58■■□□□ 1.05
SMARCD3-214ENST00000491651 MYO5AQ9Y4I1 1855 aaKnown RBP21.58■■□□□ 1.04
SMARCD3-214ENST00000491651 DOCK2Q92608 1830 aa21.57■■□□□ 1.04
SMARCD3-214ENST00000491651 TCP10L2B9ZVM9 353 aa21.57■■□□□ 1.04
SMARCD3-214ENST00000491651 LBX1P52954 281 aa21.57■■□□□ 1.04
SMARCD3-214ENST00000491651 KIF23Q02241 960 aaPredicted RBP21.57■■□□□ 1.04
SMARCD3-214ENST00000491651 MAP3K11Q16584 847 aa21.57■■□□□ 1.04
SMARCD3-214ENST00000491651 SPTY2D1Q68D10 685 aaPredicted RBP21.57■■□□□ 1.04
SMARCD3-214ENST00000491651 ZIC5Q96T25 663 aa21.57■■□□□ 1.04
SMARCD3-214ENST00000491651 UNCXA6NJT0 531 aa21.56■■□□□ 1.04
SMARCD3-214ENST00000491651 ARID4AP29374 1257 aaPredicted RBP21.56■■□□□ 1.04
SMARCD3-214ENST00000491651 PDE3AQ14432 1141 aa21.56■■□□□ 1.04
SMARCD3-214ENST00000491651 TNNI3KQ59H18 835 aa21.56■■□□□ 1.04
SMARCD3-214ENST00000491651 LDLRAD1Q5T700 205 aa21.56■■□□□ 1.04
SMARCD3-214ENST00000491651 NBPF12Q5TAG4 269 aaPredicted RBP21.56■■□□□ 1.04
SMARCD3-214ENST00000491651 FKBP1CQ5VVH2 108 aa21.56■■□□□ 1.04
SMARCD3-214ENST00000491651 APOBEC3HQ6NTF7 200 aaKnown RBP21.56■■□□□ 1.04
SMARCD3-214ENST00000491651 DAGLAQ9Y4D2 1042 aa21.56■■□□□ 1.04
SMARCD3-214ENST00000491651 FPGT-TNNI3KV9GXZ4 949 aa21.56■■□□□ 1.04
SMARCD3-214ENST00000491651 RPAP1Q9BWH6 1393 aaPredicted RBP21.56■■□□□ 1.04
SMARCD3-214ENST00000491651 UQCRFS1P1P0C7P4 283 aa21.55■■□□□ 1.04
SMARCD3-214ENST00000491651 IREB2P48200 963 aaKnown RBP21.55■■□□□ 1.04
SMARCD3-214ENST00000491651 FAM83AQ86UY5 434 aa21.55■■□□□ 1.04
SMARCD3-214ENST00000491651 DZIP1Q86YF9 867 aaKnown RBP21.55■■□□□ 1.04
SMARCD3-214ENST00000491651 ERC1Q8IUD2 1116 aa21.55■■□□□ 1.04
SMARCD3-214ENST00000491651 SLF2Q8IX21 1173 aa21.55■■□□□ 1.04
SMARCD3-214ENST00000491651 DIXDC1Q155Q3 683 aa21.54■■□□□ 1.04
SMARCD3-214ENST00000491651 ABCF2Q9UG63 623 aa21.54■■□□□ 1.04
SMARCD3-214ENST00000491651 HMMRO75330 724 aa21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 CACNB3P54284 484 aa21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 HSP90AB4PQ58FF6 505 aa21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 CCDC158Q5M9N0 1113 aa21.53■■□□□ 1.04
SMARCD3-214ENST00000491651 ERICH6Q7L0X2 663 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms