RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 CTU1Q7Z7A3 348 aaKnown RBP22.97■■□□□ 1.27
SMIM4-205ENST00000491607 SIL1Q9H173 461 aa22.97■■□□□ 1.27
SMIM4-205ENST00000491607 SLC5A1P13866 664 aa22.96■■□□□ 1.27
SMIM4-205ENST00000491607 FGFR2P21802 821 aa22.96■■□□□ 1.27
SMIM4-205ENST00000491607 TNNI2P48788 182 aa22.96■■□□□ 1.27
SMIM4-205ENST00000491607 ZNF296Q8WUU4 475 aaPredicted RBP22.96■■□□□ 1.27
SMIM4-205ENST00000491607 KIF16BQ96L93 1317 aa22.96■■□□□ 1.27
SMIM4-205ENST00000491607 MANSC4A6NHS7 340 aaPredicted RBP22.95■■□□□ 1.26
SMIM4-205ENST00000491607 USP2O75604 605 aaPredicted RBP22.95■■□□□ 1.26
SMIM4-205ENST00000491607 ZBTB48P10074 688 aaPredicted RBP22.95■■□□□ 1.26
SMIM4-205ENST00000491607 LPIN2Q92539 896 aa22.95■■□□□ 1.26
SMIM4-205ENST00000491607 TEKT1Q969V4 418 aa22.95■■□□□ 1.26
SMIM4-205ENST00000491607 WNK4Q96J92 1243 aa22.95■■□□□ 1.26
SMIM4-205ENST00000491607 UNCXA6NJT0 531 aa22.94■■□□□ 1.26
SMIM4-205ENST00000491607 RARSP54136 660 aaKnown RBP22.94■■□□□ 1.26
SMIM4-205ENST00000491607 MLLT1Q03111 559 aaPredicted RBP22.94■■□□□ 1.26
SMIM4-205ENST00000491607 ATG9AQ7Z3C6 839 aa22.94■■□□□ 1.26
SMIM4-205ENST00000491607 ANKRD13AQ8IZ07 590 aa22.94■■□□□ 1.26
SMIM4-205ENST00000491607 TMEM39BQ9GZU3 492 aa22.94■■□□□ 1.26
SMIM4-205ENST00000491607 HDAC5Q9UQL6 1122 aa22.94■■□□□ 1.26
SMIM4-205ENST00000491607 LRRFIP2Q9Y608 721 aaKnown RBP22.94■■□□□ 1.26
SMIM4-205ENST00000491607 GPR25O00155 361 aa22.93■■□□□ 1.26
SMIM4-205ENST00000491607 HDLBPQ00341 1268 aaKnown RBP22.93■■□□□ 1.26
SMIM4-205ENST00000491607 CDAN1Q8IWY9 1227 aa22.93■■□□□ 1.26
SMIM4-205ENST00000491607 MAST3O60307 1309 aa22.92■■□□□ 1.26
SMIM4-205ENST00000491607 ALDH1A1P00352 501 aa22.92■■□□□ 1.26
SMIM4-205ENST00000491607 CACNB3P54284 484 aa22.92■■□□□ 1.26
SMIM4-205ENST00000491607 INHBEP58166 350 aa22.92■■□□□ 1.26
SMIM4-205ENST00000491607 CIAO1O76071 339 aa22.91■■□□□ 1.26
SMIM4-205ENST00000491607 RGS19P49795 217 aa22.91■■□□□ 1.26
SMIM4-205ENST00000491607 ATP2B3Q16720 1220 aa22.91■■□□□ 1.26
SMIM4-205ENST00000491607 IFNL1Q8IU54 200 aa22.91■■□□□ 1.26
SMIM4-205ENST00000491607 TEPSINQ96N21 525 aa22.91■■□□□ 1.26
SMIM4-205ENST00000491607 MEIS3Q99687 375 aa22.91■■□□□ 1.26
SMIM4-205ENST00000491607 ELP3Q9H9T3 547 aa22.91■■□□□ 1.26
SMIM4-205ENST00000491607 TMOD2Q9NZR1 351 aa22.91■■□□□ 1.26
SMIM4-205ENST00000491607 CEP126Q9P2H0 1117 aa22.91■■□□□ 1.26
SMIM4-205ENST00000491607 FBXO3Q9UK99 471 aa22.91■■□□□ 1.26
SMIM4-205ENST00000491607 SUGT1Q9Y2Z0 365 aa22.91■■□□□ 1.26
SMIM4-205ENST00000491607 WDR66Q8TBY9 1149 aa22.9■■□□□ 1.26
SMIM4-205ENST00000491607 ZDHHC15Q96MV8 337 aa22.9■■□□□ 1.26
SMIM4-205ENST00000491607 CFHR5Q9BXR6 569 aa22.9■■□□□ 1.26
SMIM4-205ENST00000491607 R3HDMLQ9H3Y0 253 aa22.9■■□□□ 1.26
SMIM4-205ENST00000491607 PA2G4Q9UQ80 394 aaKnown RBP22.9■■□□□ 1.26
SMIM4-205ENST00000491607 FKTNO75072 461 aa22.89■■□□□ 1.25
SMIM4-205ENST00000491607 NOM1Q5C9Z4 860 aaKnown RBP22.89■■□□□ 1.25
SMIM4-205ENST00000491607 IGF2BP3O00425 579 aaKnown RBP eCLIP22.88■■□□□ 1.25
SMIM4-205ENST00000491607 GJA5P36382 358 aa22.88■■□□□ 1.25
SMIM4-205ENST00000491607 IL15P40933 162 aaPredicted RBP22.88■■□□□ 1.25
SMIM4-205ENST00000491607 PKN2Q16513 984 aaKnown RBP22.88■■□□□ 1.25
SMIM4-205ENST00000491607 ARHGAP45Q92619 1136 aa22.88■■□□□ 1.25
SMIM4-205ENST00000491607 OPTNQ96CV9 577 aa22.88■■□□□ 1.25
SMIM4-205ENST00000491607 MRIQ9BWK5 157 aa22.88■■□□□ 1.25
SMIM4-205ENST00000491607 GNL3LQ9NVN8 582 aaKnown RBP22.88■■□□□ 1.25
SMIM4-205ENST00000491607 SOX10P56693 466 aa22.87■■□□□ 1.25
SMIM4-205ENST00000491607 APOBEC3HQ6NTF7 200 aaKnown RBP22.87■■□□□ 1.25
SMIM4-205ENST00000491607 HPS5Q9UPZ3 1129 aa22.87■■□□□ 1.25
SMIM4-205ENST00000491607 INTS3Q68E01 1043 aaKnown RBP22.86■■□□□ 1.25
SMIM4-205ENST00000491607 OTUD7BQ6GQQ9 843 aa22.86■■□□□ 1.25
SMIM4-205ENST00000491607 HHIPL2Q6UWX4 724 aa22.86■■□□□ 1.25
SMIM4-205ENST00000491607 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.86■■□□□ 1.25
SMIM4-205ENST00000491607 FRAT1Q92837 279 aaPredicted RBP22.86■■□□□ 1.25
SMIM4-205ENST00000491607 OTOFQ9HC10 1997 aa22.86■■□□□ 1.25
SMIM4-205ENST00000491607 IPO8O15397 1037 aaKnown RBP22.85■■□□□ 1.25
SMIM4-205ENST00000491607 GNAI3P08754 354 aa22.85■■□□□ 1.25
SMIM4-205ENST00000491607 MAP3K9P80192 1104 aa22.85■■□□□ 1.25
SMIM4-205ENST00000491607 VGLL4Q14135 290 aa22.85■■□□□ 1.25
SMIM4-205ENST00000491607 COPRSQ9NQ92 184 aa22.85■■□□□ 1.25
SMIM4-205ENST00000491607 CSADQ9Y600 493 aa22.85■■□□□ 1.25
SMIM4-205ENST00000491607 SRGAP3O43295 1099 aa22.84■■□□□ 1.25
SMIM4-205ENST00000491607 FAM83AQ86UY5 434 aa22.84■■□□□ 1.25
SMIM4-205ENST00000491607 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.84■■□□□ 1.25
SMIM4-205ENST00000491607 CNKSR2Q8WXI2 1034 aa22.84■■□□□ 1.25
SMIM4-205ENST00000491607 MYH13Q9UKX3 1938 aa22.84■■□□□ 1.25
SMIM4-205ENST00000491607 LDHBP07195 334 aaKnown RBP22.83■■□□□ 1.25
SMIM4-205ENST00000491607 PRDX5P30044 214 aa22.83■■□□□ 1.25
SMIM4-205ENST00000491607 PHKA1P46020 1223 aa22.83■■□□□ 1.25
SMIM4-205ENST00000491607 DIXDC1Q155Q3 683 aa22.83■■□□□ 1.25
SMIM4-205ENST00000491607 FKBP1CQ5VVH2 108 aa22.83■■□□□ 1.25
SMIM4-205ENST00000491607 HOOK2Q96ED9 719 aa22.83■■□□□ 1.25
SMIM4-205ENST00000491607 DENND2AQ9ULE3 1009 aa22.83■■□□□ 1.25
SMIM4-205ENST00000491607 BCAR3O75815 825 aa22.82■■□□□ 1.24
SMIM4-205ENST00000491607 TRIM27P14373 513 aa22.82■■□□□ 1.24
SMIM4-205ENST00000491607 ADORA1P30542 326 aa22.82■■□□□ 1.24
SMIM4-205ENST00000491607 CRHR2Q13324 411 aa22.82■■□□□ 1.24
SMIM4-205ENST00000491607 OTUD5Q96G74 571 aa22.82■■□□□ 1.24
SMIM4-205ENST00000491607 PTPN18Q99952 460 aa22.82■■□□□ 1.24
SMIM4-205ENST00000491607 DAGLAQ9Y4D2 1042 aa22.82■■□□□ 1.24
SMIM4-205ENST00000491607 LAMB1P07942 1786 aa22.81■■□□□ 1.24
SMIM4-205ENST00000491607 SEMA3EO15041 775 aa22.81■■□□□ 1.24
SMIM4-205ENST00000491607 FBXO46Q6PJ61 603 aaPredicted RBP22.81■■□□□ 1.24
SMIM4-205ENST00000491607 ATF7IPQ6VMQ6 1270 aa22.81■■□□□ 1.24
SMIM4-205ENST00000491607 CLUAP1Q96AJ1 413 aa22.81■■□□□ 1.24
SMIM4-205ENST00000491607 WRNIP1Q96S55 665 aa22.81■■□□□ 1.24
SMIM4-205ENST00000491607 TNNQ9UQP3 1299 aa22.81■■□□□ 1.24
SMIM4-205ENST00000491607 TESPA1A2RU30 521 aaPredicted RBP22.8■■□□□ 1.24
SMIM4-205ENST00000491607 CCDC102BQ68D86 513 aa22.8■■□□□ 1.24
SMIM4-205ENST00000491607 CCL15-CCL14A0A0B4J2E2 113 aa22.79■■□□□ 1.24
SMIM4-205ENST00000491607 GTF2A2P52657 109 aa22.79■■□□□ 1.24
SMIM4-205ENST00000491607 TIMM10P62072 90 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms