RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 FRAT1Q92837 279 aaPredicted RBP10.3□□□□□ -0.76
LSM2-213ENST00000491421 TDRD3Q9H7E2 651 aaKnown RBP10.3□□□□□ -0.76
LSM2-213ENST00000491421 CEP126Q9P2H0 1117 aa10.3□□□□□ -0.76
LSM2-213ENST00000491421 ZNF70Q9UC06 446 aaPredicted RBP10.3□□□□□ -0.76
LSM2-213ENST00000491421 FBXO3Q9UK99 471 aa10.3□□□□□ -0.76
LSM2-213ENST00000491421 FZD1Q9UP38 647 aa10.3□□□□□ -0.76
LSM2-213ENST00000491421 GNAI3P08754 354 aa10.29□□□□□ -0.76
LSM2-213ENST00000491421 TRIM27P14373 513 aa10.29□□□□□ -0.76
LSM2-213ENST00000491421 GRIK5Q16478 980 aa10.29□□□□□ -0.76
LSM2-213ENST00000491421 ATP2B3Q16720 1220 aa10.29□□□□□ -0.76
LSM2-213ENST00000491421 NBPF12Q5TAG4 269 aaPredicted RBP10.29□□□□□ -0.76
LSM2-213ENST00000491421 TEKT1Q969V4 418 aa10.29□□□□□ -0.76
LSM2-213ENST00000491421 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
LSM2-213ENST00000491421 PA2G4Q9UQ80 394 aaKnown RBP10.29□□□□□ -0.76
LSM2-213ENST00000491421 SSC5DA1L4H1 1573 aa10.29□□□□□ -0.76
LSM2-213ENST00000491421 MAST3O60307 1309 aa10.29□□□□□ -0.76
LSM2-213ENST00000491421 TCP10L2B9ZVM9 353 aa10.28□□□□□ -0.76
LSM2-213ENST00000491421 BCAR3O75815 825 aa10.28□□□□□ -0.76
LSM2-213ENST00000491421 IL15P40933 162 aaPredicted RBP10.28□□□□□ -0.76
LSM2-213ENST00000491421 IREB2P48200 963 aaKnown RBP10.28□□□□□ -0.76
LSM2-213ENST00000491421 HDLBPQ00341 1268 aaKnown RBP10.28□□□□□ -0.76
LSM2-213ENST00000491421 SREBF2Q12772 1141 aa10.28□□□□□ -0.76
LSM2-213ENST00000491421 DGKZQ13574 1117 aa10.28□□□□□ -0.76
LSM2-213ENST00000491421 MAP3K11Q16584 847 aa10.28□□□□□ -0.76
LSM2-213ENST00000491421 SPRYD7Q5W111 196 aa10.28□□□□□ -0.76
LSM2-213ENST00000491421 ATF7IPQ6VMQ6 1270 aa10.28□□□□□ -0.76
LSM2-213ENST00000491421 SLC10A4Q96EP9 437 aa10.28□□□□□ -0.76
LSM2-213ENST00000491421 MCOLN1Q9GZU1 580 aa10.28□□□□□ -0.76
LSM2-213ENST00000491421 SUGT1Q9Y2Z0 365 aa10.28□□□□□ -0.76
LSM2-213ENST00000491421 UNCXA6NJT0 531 aa10.27□□□□□ -0.77
LSM2-213ENST00000491421 SRGAP3O43295 1099 aa10.27□□□□□ -0.77
LSM2-213ENST00000491421 TM4SF4P48230 202 aa10.27□□□□□ -0.77
LSM2-213ENST00000491421 TNNI2P48788 182 aa10.27□□□□□ -0.77
LSM2-213ENST00000491421 WDR66Q8TBY9 1149 aa10.27□□□□□ -0.77
LSM2-213ENST00000491421 CLUAP1Q96AJ1 413 aa10.27□□□□□ -0.77
LSM2-213ENST00000491421 CLMNQ96JQ2 1002 aa10.27□□□□□ -0.77
LSM2-213ENST00000491421 COPRSQ9NQ92 184 aa10.27□□□□□ -0.77
LSM2-213ENST00000491421 GNL3LQ9NVN8 582 aaKnown RBP10.27□□□□□ -0.77
LSM2-213ENST00000491421 TMOD2Q9NZR1 351 aa10.27□□□□□ -0.77
LSM2-213ENST00000491421 TNNQ9UQP3 1299 aa10.27□□□□□ -0.77
LSM2-213ENST00000491421 CCDC85CA6NKD9 419 aa10.26□□□□□ -0.77
LSM2-213ENST00000491421 USP2O75604 605 aaPredicted RBP10.26□□□□□ -0.77
LSM2-213ENST00000491421 TBC1D8O95759 1140 aa10.26□□□□□ -0.77
LSM2-213ENST00000491421 ZBTB48P10074 688 aaPredicted RBP10.26□□□□□ -0.77
LSM2-213ENST00000491421 CACNB3P54284 484 aa10.26□□□□□ -0.77
LSM2-213ENST00000491421 MTX1Q13505 466 aa10.26□□□□□ -0.77
LSM2-213ENST00000491421 ZKSCAN2Q63HK3 967 aa10.26□□□□□ -0.77
LSM2-213ENST00000491421 ZDHHC15Q96MV8 337 aa10.26□□□□□ -0.77
LSM2-213ENST00000491421 MRIQ9BWK5 157 aa10.26□□□□□ -0.77
LSM2-213ENST00000491421 TMEM39BQ9GZU3 492 aa10.26□□□□□ -0.77
LSM2-213ENST00000491421 ARAP2Q8WZ64 1704 aa10.26□□□□□ -0.77
LSM2-213ENST00000491421 MANSC4A6NHS7 340 aaPredicted RBP10.25□□□□□ -0.77
LSM2-213ENST00000491421 SEMA3EO15041 775 aa10.25□□□□□ -0.77
LSM2-213ENST00000491421 GNAI2P04899 355 aa10.25□□□□□ -0.77
LSM2-213ENST00000491421 PHKA1P46020 1223 aa10.25□□□□□ -0.77
LSM2-213ENST00000491421 APOBEC3HQ6NTF7 200 aaKnown RBP10.25□□□□□ -0.77
LSM2-213ENST00000491421 HHIPL2Q6UWX4 724 aa10.25□□□□□ -0.77
LSM2-213ENST00000491421 CDAN1Q8IWY9 1227 aa10.25□□□□□ -0.77
LSM2-213ENST00000491421 ANKRD13AQ8IZ07 590 aa10.25□□□□□ -0.77
LSM2-213ENST00000491421 WNK4Q96J92 1243 aa10.25□□□□□ -0.77
LSM2-213ENST00000491421 TEPSINQ96N21 525 aa10.25□□□□□ -0.77
LSM2-213ENST00000491421 ALDH1A1P00352 501 aa10.24□□□□□ -0.77
LSM2-213ENST00000491421 LDHBP07195 334 aaKnown RBP10.24□□□□□ -0.77
LSM2-213ENST00000491421 PRDX5P30044 214 aa10.24□□□□□ -0.77
LSM2-213ENST00000491421 ADORA1P30542 326 aa10.24□□□□□ -0.77
LSM2-213ENST00000491421 INHBEP58166 350 aa10.24□□□□□ -0.77
LSM2-213ENST00000491421 TFCP2Q12800 502 aa10.24□□□□□ -0.77
LSM2-213ENST00000491421 CCDC102BQ68D86 513 aa10.24□□□□□ -0.77
LSM2-213ENST00000491421 CTU1Q7Z7A3 348 aaKnown RBP10.24□□□□□ -0.77
LSM2-213ENST00000491421 DENND2AQ9ULE3 1009 aa10.24□□□□□ -0.77
LSM2-213ENST00000491421 AKAP2Q9Y2D5 859 aa10.24□□□□□ -0.77
LSM2-213ENST00000491421 A0A1B0GUL7 405 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 TIMM10P62072 90 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 RASGRF1Q13972 1273 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 MVPQ14764 893 aaKnown RBP10.23□□□□□ -0.77
LSM2-213ENST00000491421 DIXDC1Q155Q3 683 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 FKBP1CQ5VVH2 108 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 FAM83AQ86UY5 434 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 IFNL1Q8IU54 200 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 FTSJ3Q8IY81 847 aaKnown RBP10.23□□□□□ -0.77
LSM2-213ENST00000491421 TMEM57Q8N5G2 664 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 ZNF296Q8WUU4 475 aaPredicted RBP10.23□□□□□ -0.77
LSM2-213ENST00000491421 CFHR5Q9BXR6 569 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 ELP3Q9H9T3 547 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 DAGLAQ9Y4D2 1042 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 CSADQ9Y600 493 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 SALL1Q9NSC2 1324 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 ECM29Q5VYK3 1845 aa10.23□□□□□ -0.77
LSM2-213ENST00000491421 PNMA6EA0A0J9YXQ4 647 aa10.22□□□□□ -0.77
LSM2-213ENST00000491421 GPR25O00155 361 aa10.22□□□□□ -0.77
LSM2-213ENST00000491421 IGF2BP3O00425 579 aaKnown RBP eCLIP10.22□□□□□ -0.77
LSM2-213ENST00000491421 GJA5P36382 358 aa10.22□□□□□ -0.77
LSM2-213ENST00000491421 MAP3K9P80192 1104 aa10.22□□□□□ -0.77
LSM2-213ENST00000491421 VGLL4Q14135 290 aa10.22□□□□□ -0.77
LSM2-213ENST00000491421 NOM1Q5C9Z4 860 aaKnown RBP10.22□□□□□ -0.77
LSM2-213ENST00000491421 CDC42EP5Q6NZY7 148 aa10.22□□□□□ -0.77
LSM2-213ENST00000491421 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.22□□□□□ -0.77
LSM2-213ENST00000491421 ZGPATQ8N5A5 531 aaKnown RBP10.22□□□□□ -0.77
LSM2-213ENST00000491421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.22□□□□□ -0.772e-9■■■■□ 21.6
LSM2-213ENST00000491421 OPTNQ96CV9 577 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms