RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 SPDYE2Q495Y8 402 aa18.84■□□□□ 0.61
COL27A1-206ENST00000490831 CCDC102BQ68D86 513 aa18.84■□□□□ 0.61
COL27A1-206ENST00000490831 CCDC102AQ96A19 550 aa18.84■□□□□ 0.61
COL27A1-206ENST00000490831 MAST3O60307 1309 aa18.83■□□□□ 0.61
COL27A1-206ENST00000490831 PDS5AQ29RF7 1337 aaKnown RBP18.83■□□□□ 0.61
COL27A1-206ENST00000490831 A0A1B0GUL7 405 aa18.83■□□□□ 0.6
COL27A1-206ENST00000490831 NF2P35240 595 aa18.83■□□□□ 0.6
COL27A1-206ENST00000490831 TIMM10P62072 90 aa18.83■□□□□ 0.6
COL27A1-206ENST00000490831 G3BP1Q13283 466 aaKnown RBP eCLIP18.83■□□□□ 0.6
COL27A1-206ENST00000490831 C1orf115Q9H7X2 142 aa18.83■□□□□ 0.6
COL27A1-206ENST00000490831 ZNF70Q9UC06 446 aaPredicted RBP18.83■□□□□ 0.6
COL27A1-206ENST00000490831 DENND2AQ9ULE3 1009 aa18.83■□□□□ 0.6
COL27A1-206ENST00000490831 NOP58Q9Y2X3 529 aaKnown RBP18.83■□□□□ 0.6
COL27A1-206ENST00000490831 CLRN2A0PK11 232 aa18.82■□□□□ 0.6
COL27A1-206ENST00000490831 GRM1Q13255 1194 aa18.82■□□□□ 0.6
COL27A1-206ENST00000490831 HHIPL2Q6UWX4 724 aa18.82■□□□□ 0.6
COL27A1-206ENST00000490831 TEKT1Q969V4 418 aa18.82■□□□□ 0.6
COL27A1-206ENST00000490831 AIDAQ96BJ3 306 aa18.82■□□□□ 0.6
COL27A1-206ENST00000490831 XAGE2Q96GT9 111 aa18.82■□□□□ 0.6
COL27A1-206ENST00000490831 ZDHHC15Q96MV8 337 aa18.82■□□□□ 0.6
COL27A1-206ENST00000490831 SLC10A3P09131 477 aa18.81■□□□□ 0.6
COL27A1-206ENST00000490831 ZNF157P51786 506 aaPredicted RBP18.81■□□□□ 0.6
COL27A1-206ENST00000490831 MVPQ14764 893 aaKnown RBP18.81■□□□□ 0.6
COL27A1-206ENST00000490831 TDRD3Q9H7E2 651 aaKnown RBP18.81■□□□□ 0.6
COL27A1-206ENST00000490831 GPR108Q9NPR9 543 aa18.81■□□□□ 0.6
COL27A1-206ENST00000490831 CTCFP49711 727 aaPredicted RBP18.8■□□□□ 0.6
COL27A1-206ENST00000490831 TNFAIP1Q13829 316 aa18.8■□□□□ 0.6
COL27A1-206ENST00000490831 MAP3K11Q16584 847 aa18.8■□□□□ 0.6
COL27A1-206ENST00000490831 CEP85Q6P2H3 762 aa18.8■□□□□ 0.6
COL27A1-206ENST00000490831 MOB2Q70IA6 237 aa18.8■□□□□ 0.6
COL27A1-206ENST00000490831 VEZTQ9HBM0 779 aa18.8■□□□□ 0.6
COL27A1-206ENST00000490831 SSC5DA1L4H1 1573 aa18.8■□□□□ 0.6
COL27A1-206ENST00000490831 RASGRF1Q13972 1273 aa18.79■□□□□ 0.6
COL27A1-206ENST00000490831 RASA3Q14644 834 aa18.79■□□□□ 0.6
COL27A1-206ENST00000490831 LDLRAD1Q5T700 205 aa18.79■□□□□ 0.6
COL27A1-206ENST00000490831 COL13A1Q5TAT6 717 aaPredicted RBP18.79■□□□□ 0.6
COL27A1-206ENST00000490831 APOBEC3HQ6NTF7 200 aaKnown RBP18.79■□□□□ 0.6
COL27A1-206ENST00000490831 RASAL3Q86YV0 1011 aa18.79■□□□□ 0.6
COL27A1-206ENST00000490831 ZIC5Q96T25 663 aa18.79■□□□□ 0.6
COL27A1-206ENST00000490831 PRDM10Q9NQV6 1147 aa18.79■□□□□ 0.6
COL27A1-206ENST00000490831 DDX19BQ9UMR2 479 aa18.79■□□□□ 0.6
COL27A1-206ENST00000490831 UBE2Q2LH0YL09 131 aa18.78■□□□□ 0.6
COL27A1-206ENST00000490831 PRDX5P30044 214 aa18.78■□□□□ 0.6
COL27A1-206ENST00000490831 SUPT20HL1Q3ZLR7 823 aa18.78■□□□□ 0.6
COL27A1-206ENST00000490831 FKBP1CQ5VVH2 108 aa18.78■□□□□ 0.6
COL27A1-206ENST00000490831 ARMC9Q7Z3E5 817 aa18.78■□□□□ 0.6
COL27A1-206ENST00000490831 ZGPATQ8N5A5 531 aaKnown RBP18.78■□□□□ 0.6
COL27A1-206ENST00000490831 ZBTB40Q9NUA8 1239 aa18.78■□□□□ 0.6
COL27A1-206ENST00000490831 CA12O43570 354 aa18.77■□□□□ 0.6
COL27A1-206ENST00000490831 SURF6O75683 361 aaKnown RBP18.77■□□□□ 0.6
COL27A1-206ENST00000490831 LDHBP07195 334 aaKnown RBP18.77■□□□□ 0.6
COL27A1-206ENST00000490831 HSPA8P11142 646 aaKnown RBP18.77■□□□□ 0.6
COL27A1-206ENST00000490831 ARID4AP29374 1257 aaPredicted RBP18.77■□□□□ 0.6
COL27A1-206ENST00000490831 PDE3AQ14432 1141 aa18.77■□□□□ 0.6
COL27A1-206ENST00000490831 TEPSINQ96N21 525 aa18.77■□□□□ 0.6
COL27A1-206ENST00000490831 NEUROD6Q96NK8 337 aa18.77■□□□□ 0.6
COL27A1-206ENST00000490831 UNCXA6NJT0 531 aa18.76■□□□□ 0.59
COL27A1-206ENST00000490831 TTLL12Q14166 644 aaPredicted RBP18.76■□□□□ 0.59
COL27A1-206ENST00000490831 TNNI3KQ59H18 835 aa18.76■□□□□ 0.59
COL27A1-206ENST00000490831 NBPF12Q5TAG4 269 aaPredicted RBP18.76■□□□□ 0.59
COL27A1-206ENST00000490831 BEGAINQ9BUH8 593 aa18.76■□□□□ 0.59
COL27A1-206ENST00000490831 COG6Q9Y2V7 657 aa18.76■□□□□ 0.59
COL27A1-206ENST00000490831 FPGT-TNNI3KV9GXZ4 949 aa18.76■□□□□ 0.59
COL27A1-206ENST00000490831 PPP1R12BO60237 982 aaPredicted RBP18.75■□□□□ 0.59
COL27A1-206ENST00000490831 TNNI2P48788 182 aa18.75■□□□□ 0.59
COL27A1-206ENST00000490831 KIF23Q02241 960 aaPredicted RBP18.75■□□□□ 0.59
COL27A1-206ENST00000490831 FAM83AQ86UY5 434 aa18.75■□□□□ 0.59
COL27A1-206ENST00000490831 REM2Q8IYK8 340 aaPredicted RBP18.75■□□□□ 0.59
COL27A1-206ENST00000490831 CHMP4BQ9H444 224 aaKnown RBP18.75■□□□□ 0.59
COL27A1-206ENST00000490831 DAGLAQ9Y4D2 1042 aa18.75■□□□□ 0.59
COL27A1-206ENST00000490831 TCP10L2B9ZVM9 353 aa18.74■□□□□ 0.59
COL27A1-206ENST00000490831 OS9Q13438 667 aaPredicted RBP18.74■□□□□ 0.59
COL27A1-206ENST00000490831 DIXDC1Q155Q3 683 aa18.74■□□□□ 0.59
COL27A1-206ENST00000490831 RPAP2Q8IXW5 612 aaPredicted RBP18.74■□□□□ 0.59
COL27A1-206ENST00000490831 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.74■□□□□ 0.59
COL27A1-206ENST00000490831 HMG20BQ9P0W2 317 aa18.74■□□□□ 0.59
COL27A1-206ENST00000490831 ANGEL1Q9UNK9 670 aaKnown RBP18.74■□□□□ 0.59
COL27A1-206ENST00000490831 GAKO14976 1311 aa18.74■□□□□ 0.59
COL27A1-206ENST00000490831 RPAP1Q9BWH6 1393 aaPredicted RBP18.73■□□□□ 0.59
COL27A1-206ENST00000490831 UQCRFS1P1P0C7P4 283 aa18.73■□□□□ 0.59
COL27A1-206ENST00000490831 LBX1P52954 281 aa18.73■□□□□ 0.59
COL27A1-206ENST00000490831 PRKG1Q13976 671 aa18.73■□□□□ 0.59
COL27A1-206ENST00000490831 GORABQ5T7V8 394 aa18.73■□□□□ 0.59
COL27A1-206ENST00000490831 C20orf194Q5TEA3 1177 aa18.73■□□□□ 0.59
COL27A1-206ENST00000490831 SPTY2D1Q68D10 685 aaPredicted RBP18.73■□□□□ 0.59
COL27A1-206ENST00000490831 FAM163AQ96GL9 167 aaPredicted RBP18.73■□□□□ 0.59
COL27A1-206ENST00000490831 ZNF512BQ96KM6 892 aaPredicted RBP18.73■□□□□ 0.59
COL27A1-206ENST00000490831 CSRNP1Q96S65 589 aa18.73■□□□□ 0.59
COL27A1-206ENST00000490831 TMEM39BQ9GZU3 492 aa18.73■□□□□ 0.59
COL27A1-206ENST00000490831 TMOD2Q9NZR1 351 aa18.73■□□□□ 0.59
COL27A1-206ENST00000490831 USP2O75604 605 aaPredicted RBP18.72■□□□□ 0.59
COL27A1-206ENST00000490831 CDAN1Q8IWY9 1227 aa18.72■□□□□ 0.59
COL27A1-206ENST00000490831 SPATA5Q8NB90 893 aa18.72■□□□□ 0.59
COL27A1-206ENST00000490831 SAGE1Q9NXZ1 904 aa18.72■□□□□ 0.59
COL27A1-206ENST00000490831 FZD1Q9UP38 647 aa18.72■□□□□ 0.59
COL27A1-206ENST00000490831 MCAMP43121 646 aa18.71■□□□□ 0.59
COL27A1-206ENST00000490831 IREB2P48200 963 aaKnown RBP18.71■□□□□ 0.59
COL27A1-206ENST00000490831 CACNB3P54284 484 aa18.71■□□□□ 0.59
COL27A1-206ENST00000490831 HSP90AB4PQ58FF6 505 aa18.71■□□□□ 0.59
COL27A1-206ENST00000490831 CDC42EP5Q6NZY7 148 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms