RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 IL2RBP14784 551 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 ZNF790Q6PG37 636 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 CEP57L1Q8IYX8 460 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 FAM177A1Q8N128 213 aaPredicted RBP11.74□□□□□ -0.53
BRD9-209ENST00000490814 SPATA31A6Q5VVP1 1343 aa11.74□□□□□ -0.53
BRD9-209ENST00000490814 A0A0G2JLW4 131 aa11.73□□□□□ -0.53
BRD9-209ENST00000490814 CCAR2Q8N163 923 aaKnown RBP11.73□□□□□ -0.53
BRD9-209ENST00000490814 ZNF496Q96IT1 587 aaPredicted RBP11.73□□□□□ -0.53
BRD9-209ENST00000490814 GJD4Q96KN9 370 aaPredicted RBP11.73□□□□□ -0.53
BRD9-209ENST00000490814 ZSCAN16Q9H4T2 348 aaPredicted RBP11.73□□□□□ -0.53
BRD9-209ENST00000490814 NRDCO43847 1150 aa11.73□□□□□ -0.53
BRD9-209ENST00000490814 UBXN4Q92575 508 aa11.73□□□□□ -0.53
BRD9-209ENST00000490814 KCNB2Q92953 911 aa11.73□□□□□ -0.53
BRD9-209ENST00000490814 ZNF396Q96N95 335 aaPredicted RBP11.73□□□□□ -0.53
BRD9-209ENST00000490814 CPLX1O14810 134 aa11.73□□□□□ -0.53
BRD9-209ENST00000490814 RGPD1P0DJD0 1748 aa11.73□□□□□ -0.53
BRD9-209ENST00000490814 GNL2Q13823 731 aaKnown RBP11.73□□□□□ -0.53
BRD9-209ENST00000490814 TTLL5Q6EMB2 1281 aa11.73□□□□□ -0.53
BRD9-209ENST00000490814 ZCRB1Q8TBF4 217 aaKnown RBP11.73□□□□□ -0.53
BRD9-209ENST00000490814 SSR1P43307 286 aaKnown RBP11.72□□□□□ -0.53
BRD9-209ENST00000490814 ZSCAN26Q16670 478 aa11.72□□□□□ -0.53
BRD9-209ENST00000490814 TMCO3Q6UWJ1 677 aa11.72□□□□□ -0.53
BRD9-209ENST00000490814 STK11IPQ8N1F8 1099 aa11.72□□□□□ -0.53
BRD9-209ENST00000490814 GOLPH3LQ9H4A5 285 aa11.72□□□□□ -0.53
BRD9-209ENST00000490814 GPHNQ9NQX3 736 aaPredicted RBP11.72□□□□□ -0.53
BRD9-209ENST00000490814 ANO10Q9NW15 660 aa11.72□□□□□ -0.53
BRD9-209ENST00000490814 FAM208AQ9UK61 1670 aaKnown RBP11.72□□□□□ -0.53
BRD9-209ENST00000490814 ATP5JP18859 108 aa11.72□□□□□ -0.53
BRD9-209ENST00000490814 CALRP27797 417 aaKnown RBP11.72□□□□□ -0.53
BRD9-209ENST00000490814 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
BRD9-209ENST00000490814 DHX32Q7L7V1 743 aaKnown RBP11.72□□□□□ -0.53
BRD9-209ENST00000490814 TMC6Q7Z403 805 aa11.72□□□□□ -0.53
BRD9-209ENST00000490814 SRLQ86TD4 932 aa11.72□□□□□ -0.53
BRD9-209ENST00000490814 ARGLU1Q9NWB6 273 aaPredicted RBP11.72□□□□□ -0.53
BRD9-209ENST00000490814 RRP15Q9Y3B9 282 aaKnown RBP11.72□□□□□ -0.53
BRD9-209ENST00000490814 CLCN6P51797 869 aa11.72□□□□□ -0.53
BRD9-209ENST00000490814 STOX1Q6ZVD7 989 aa11.72□□□□□ -0.53
BRD9-209ENST00000490814 ZNF594Q96JF6 807 aaPredicted RBP11.72□□□□□ -0.53
BRD9-209ENST00000490814 METTL22Q9BUU2 404 aaPredicted RBP11.72□□□□□ -0.53
BRD9-209ENST00000490814 CCDC189A1A4V9 331 aa11.71□□□□□ -0.53
BRD9-209ENST00000490814 PTPN12Q05209 780 aaKnown RBP11.71□□□□□ -0.53
BRD9-209ENST00000490814 GPS2Q13227 327 aa11.71□□□□□ -0.53
BRD9-209ENST00000490814 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
BRD9-209ENST00000490814 LRRN4CLQ8ND94 238 aa11.71□□□□□ -0.53
BRD9-209ENST00000490814 CALR3Q96L12 384 aaKnown RBP11.71□□□□□ -0.53
BRD9-209ENST00000490814 NAT10Q9H0A0 1025 aaKnown RBP11.71□□□□□ -0.53
BRD9-209ENST00000490814 DNAI1Q9UI46 699 aa11.71□□□□□ -0.53
BRD9-209ENST00000490814 ZBTB12Q9Y330 459 aaPredicted RBP11.71□□□□□ -0.53
BRD9-209ENST00000490814 WDR17Q8IZU2 1322 aa11.71□□□□□ -0.53
BRD9-209ENST00000490814 PXDNQ92626 1479 aa11.71□□□□□ -0.53
BRD9-209ENST00000490814 URI1O94763 535 aaPredicted RBP11.71□□□□□ -0.54
BRD9-209ENST00000490814 TSGA10IPQ3SY00 556 aa11.71□□□□□ -0.54
BRD9-209ENST00000490814 NSUN7Q8NE18 718 aaKnown RBP11.71□□□□□ -0.54
BRD9-209ENST00000490814 ATG3Q9NT62 314 aa11.71□□□□□ -0.54
BRD9-209ENST00000490814 GJB4Q9NTQ9 266 aa11.71□□□□□ -0.54
BRD9-209ENST00000490814 WWC3Q9ULE0 1092 aa11.71□□□□□ -0.54
BRD9-209ENST00000490814 IFIT1P09914 478 aaKnown RBP11.7□□□□□ -0.54
BRD9-209ENST00000490814 MAP2K2P36507 400 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 BIRC2Q13490 618 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 PPP2R5AQ15172 486 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 SYNE3Q6ZMZ3 975 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 MRFAP1L1Q96HT8 127 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 PAG1Q9NWQ8 432 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 MED23Q9ULK4 1368 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 TRIM37O94972 964 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 GSCP56915 257 aaPredicted RBP11.7□□□□□ -0.54
BRD9-209ENST00000490814 IQCB1Q15051 598 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 NBPF11Q86T75 865 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 FMN2Q9NZ56 1722 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 KIF2AO00139 706 aaPredicted RBP11.7□□□□□ -0.54
BRD9-209ENST00000490814 PPP1R12AO14974 1030 aaPredicted RBP11.7□□□□□ -0.54
BRD9-209ENST00000490814 SFPQP23246 707 aaKnown RBP eCLIP11.7□□□□□ -0.54
BRD9-209ENST00000490814 CCZ1BP86790 482 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 CCZ1P86791 482 aaPredicted RBP11.7□□□□□ -0.54
BRD9-209ENST00000490814 PDIA6Q15084 440 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 NBPF9Q3BBW0 867 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 HSP90AA4PQ58FG1 418 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 EP400Q96L91 3159 aa11.7□□□□□ -0.54
BRD9-209ENST00000490814 CTAGE5O15320 804 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 KCNQ2O43526 872 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 SEC31AO94979 1220 aaKnown RBP11.69□□□□□ -0.54
BRD9-209ENST00000490814 PNMA6AP0CW24 399 aaPredicted RBP11.69□□□□□ -0.54
BRD9-209ENST00000490814 FAM160A1Q05DH4 1040 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 PTPN21Q16825 1174 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 RPAINQ86UA6 219 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 ZCCHC17Q9NP64 241 aaKnown RBP11.69□□□□□ -0.54
BRD9-209ENST00000490814 IFNKQ9P0W0 207 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 CAVIN2O95810 425 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 LMOD1P29536 600 aaPredicted RBP11.69□□□□□ -0.54
BRD9-209ENST00000490814 MARCKSP29966 332 aaPredicted RBP11.69□□□□□ -0.54
BRD9-209ENST00000490814 CDC25BP30305 580 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 TPM4P67936 248 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 KBTBD3Q8NAB2 608 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 MRPS27Q92552 414 aaKnown RBP11.69□□□□□ -0.54
BRD9-209ENST00000490814 C8orf76Q96K31 380 aa11.69□□□□□ -0.54
BRD9-209ENST00000490814 XIRP1Q702N8 1843 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms