RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 SIL1Q9H173 461 aa26.22■■□□□ 1.79
SYNE4-205ENST00000490730 MYH13Q9UKX3 1938 aa26.22■■□□□ 1.79
SYNE4-205ENST00000490730 SLC5A1P13866 664 aa26.21■■□□□ 1.79
SYNE4-205ENST00000490730 ZNF296Q8WUU4 475 aaPredicted RBP26.21■■□□□ 1.79
SYNE4-205ENST00000490730 WNK4Q96J92 1243 aa26.21■■□□□ 1.79
SYNE4-205ENST00000490730 API5Q9BZZ5 524 aaKnown RBP26.21■■□□□ 1.79
SYNE4-205ENST00000490730 MLLT1Q03111 559 aaPredicted RBP26.2■■□□□ 1.78
SYNE4-205ENST00000490730 OTOFQ9HC10 1997 aa26.19■■□□□ 1.78
SYNE4-205ENST00000490730 MANSC4A6NHS7 340 aaPredicted RBP26.19■■□□□ 1.78
SYNE4-205ENST00000490730 FGFR2P21802 821 aa26.19■■□□□ 1.78
SYNE4-205ENST00000490730 TNNI2P48788 182 aa26.19■■□□□ 1.78
SYNE4-205ENST00000490730 TEKT1Q969V4 418 aa26.19■■□□□ 1.78
SYNE4-205ENST00000490730 KIF16BQ96L93 1317 aa26.18■■□□□ 1.78
SYNE4-205ENST00000490730 GPR25O00155 361 aa26.18■■□□□ 1.78
SYNE4-205ENST00000490730 USP2O75604 605 aaPredicted RBP26.18■■□□□ 1.78
SYNE4-205ENST00000490730 ZBTB48P10074 688 aaPredicted RBP26.18■■□□□ 1.78
SYNE4-205ENST00000490730 CDAN1Q8IWY9 1227 aa26.18■■□□□ 1.78
SYNE4-205ENST00000490730 LPIN2Q92539 896 aa26.18■■□□□ 1.78
SYNE4-205ENST00000490730 TMEM39BQ9GZU3 492 aa26.18■■□□□ 1.78
SYNE4-205ENST00000490730 LRRFIP2Q9Y608 721 aaKnown RBP26.18■■□□□ 1.78
SYNE4-205ENST00000490730 ATG9AQ7Z3C6 839 aa26.17■■□□□ 1.78
SYNE4-205ENST00000490730 ANKRD13AQ8IZ07 590 aa26.17■■□□□ 1.78
SYNE4-205ENST00000490730 UNCXA6NJT0 531 aa26.16■■□□□ 1.78
SYNE4-205ENST00000490730 ALDH1A1P00352 501 aa26.16■■□□□ 1.78
SYNE4-205ENST00000490730 CACNB3P54284 484 aa26.16■■□□□ 1.78
SYNE4-205ENST00000490730 HDLBPQ00341 1268 aaKnown RBP26.16■■□□□ 1.78
SYNE4-205ENST00000490730 R3HDMLQ9H3Y0 253 aa26.16■■□□□ 1.78
SYNE4-205ENST00000490730 MAST3O60307 1309 aa26.15■■□□□ 1.78
SYNE4-205ENST00000490730 RGS19P49795 217 aa26.15■■□□□ 1.78
SYNE4-205ENST00000490730 RARSP54136 660 aaKnown RBP26.15■■□□□ 1.78
SYNE4-205ENST00000490730 INHBEP58166 350 aa26.15■■□□□ 1.78
SYNE4-205ENST00000490730 IFNL1Q8IU54 200 aa26.15■■□□□ 1.78
SYNE4-205ENST00000490730 TEPSINQ96N21 525 aa26.15■■□□□ 1.78
SYNE4-205ENST00000490730 ELP3Q9H9T3 547 aa26.15■■□□□ 1.78
SYNE4-205ENST00000490730 TMOD2Q9NZR1 351 aa26.15■■□□□ 1.78
SYNE4-205ENST00000490730 HDAC5Q9UQL6 1122 aa26.15■■□□□ 1.78
SYNE4-205ENST00000490730 SOX10P56693 466 aa26.14■■□□□ 1.78
SYNE4-205ENST00000490730 ATP2B3Q16720 1220 aa26.14■■□□□ 1.78
SYNE4-205ENST00000490730 MEIS3Q99687 375 aa26.14■■□□□ 1.78
SYNE4-205ENST00000490730 CEP126Q9P2H0 1117 aa26.14■■□□□ 1.78
SYNE4-205ENST00000490730 LAMB1P07942 1786 aa26.13■■□□□ 1.77
SYNE4-205ENST00000490730 FKTNO75072 461 aa26.13■■□□□ 1.77
SYNE4-205ENST00000490730 CIAO1O76071 339 aa26.13■■□□□ 1.77
SYNE4-205ENST00000490730 GJA5P36382 358 aa26.13■■□□□ 1.77
SYNE4-205ENST00000490730 ZDHHC15Q96MV8 337 aa26.13■■□□□ 1.77
SYNE4-205ENST00000490730 PA2G4Q9UQ80 394 aaKnown RBP26.13■■□□□ 1.77
SYNE4-205ENST00000490730 IGF2BP3O00425 579 aaKnown RBP eCLIP26.12■■□□□ 1.77
SYNE4-205ENST00000490730 NOM1Q5C9Z4 860 aaKnown RBP26.12■■□□□ 1.77
SYNE4-205ENST00000490730 WDR66Q8TBY9 1149 aa26.12■■□□□ 1.77
SYNE4-205ENST00000490730 OPTNQ96CV9 577 aa26.12■■□□□ 1.77
SYNE4-205ENST00000490730 CFHR5Q9BXR6 569 aa26.12■■□□□ 1.77
SYNE4-205ENST00000490730 SUGT1Q9Y2Z0 365 aa26.12■■□□□ 1.77
SYNE4-205ENST00000490730 PKN2Q16513 984 aaKnown RBP26.11■■□□□ 1.77
SYNE4-205ENST00000490730 FBXO3Q9UK99 471 aa26.11■■□□□ 1.77
SYNE4-205ENST00000490730 HPS5Q9UPZ3 1129 aa26.11■■□□□ 1.77
SYNE4-205ENST00000490730 IL15P40933 162 aaPredicted RBP26.1■■□□□ 1.77
SYNE4-205ENST00000490730 GNL3LQ9NVN8 582 aaKnown RBP26.1■■□□□ 1.77
SYNE4-205ENST00000490730 OTUD7BQ6GQQ9 843 aa26.09■■□□□ 1.77
SYNE4-205ENST00000490730 APOBEC3HQ6NTF7 200 aaKnown RBP26.09■■□□□ 1.77
SYNE4-205ENST00000490730 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.09■■□□□ 1.77
SYNE4-205ENST00000490730 MRIQ9BWK5 157 aa26.09■■□□□ 1.77
SYNE4-205ENST00000490730 CSADQ9Y600 493 aa26.09■■□□□ 1.77
SYNE4-205ENST00000490730 MAP3K9P80192 1104 aa26.08■■□□□ 1.77
SYNE4-205ENST00000490730 VGLL4Q14135 290 aa26.08■■□□□ 1.77
SYNE4-205ENST00000490730 HHIPL2Q6UWX4 724 aa26.08■■□□□ 1.77
SYNE4-205ENST00000490730 CNKSR2Q8WXI2 1034 aa26.08■■□□□ 1.77
SYNE4-205ENST00000490730 ARHGAP45Q92619 1136 aa26.08■■□□□ 1.77
SYNE4-205ENST00000490730 GNAI3P08754 354 aa26.07■■□□□ 1.76
SYNE4-205ENST00000490730 FRAT1Q92837 279 aaPredicted RBP26.07■■□□□ 1.76
SYNE4-205ENST00000490730 DIXDC1Q155Q3 683 aa26.06■■□□□ 1.76
SYNE4-205ENST00000490730 INTS3Q68E01 1043 aaKnown RBP26.06■■□□□ 1.76
SYNE4-205ENST00000490730 FAM83AQ86UY5 434 aa26.06■■□□□ 1.76
SYNE4-205ENST00000490730 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.06■■□□□ 1.76
SYNE4-205ENST00000490730 COPRSQ9NQ92 184 aa26.06■■□□□ 1.76
SYNE4-205ENST00000490730 IPO8O15397 1037 aaKnown RBP26.05■■□□□ 1.76
SYNE4-205ENST00000490730 SRGAP3O43295 1099 aa26.05■■□□□ 1.76
SYNE4-205ENST00000490730 LDHBP07195 334 aaKnown RBP26.05■■□□□ 1.76
SYNE4-205ENST00000490730 PRDX5P30044 214 aa26.05■■□□□ 1.76
SYNE4-205ENST00000490730 ADORA1P30542 326 aa26.05■■□□□ 1.76
SYNE4-205ENST00000490730 PHKA1P46020 1223 aa26.05■■□□□ 1.76
SYNE4-205ENST00000490730 CRHR2Q13324 411 aa26.05■■□□□ 1.76
SYNE4-205ENST00000490730 FBXO46Q6PJ61 603 aaPredicted RBP26.05■■□□□ 1.76
SYNE4-205ENST00000490730 OTUD5Q96G74 571 aa26.05■■□□□ 1.76
SYNE4-205ENST00000490730 FKBP1CQ5VVH2 108 aa26.04■■□□□ 1.76
SYNE4-205ENST00000490730 HOOK2Q96ED9 719 aa26.04■■□□□ 1.76
SYNE4-205ENST00000490730 WRNIP1Q96S55 665 aa26.04■■□□□ 1.76
SYNE4-205ENST00000490730 PTPN18Q99952 460 aa26.04■■□□□ 1.76
SYNE4-205ENST00000490730 DENND2AQ9ULE3 1009 aa26.04■■□□□ 1.76
SYNE4-205ENST00000490730 DAGLAQ9Y4D2 1042 aa26.04■■□□□ 1.76
SYNE4-205ENST00000490730 TNRC18O15417 2968 aaPredicted RBP26.04■■□□□ 1.76
SYNE4-205ENST00000490730 BCAR3O75815 825 aa26.03■■□□□ 1.76
SYNE4-205ENST00000490730 AK9Q5TCS8 1911 aa26.03■■□□□ 1.76
SYNE4-205ENST00000490730 CCL15-CCL14A0A0B4J2E2 113 aa26.02■■□□□ 1.76
SYNE4-205ENST00000490730 TESPA1A2RU30 521 aaPredicted RBP26.02■■□□□ 1.76
SYNE4-205ENST00000490730 TRIM27P14373 513 aa26.02■■□□□ 1.76
SYNE4-205ENST00000490730 CCL15Q16663 113 aa26.02■■□□□ 1.76
SYNE4-205ENST00000490730 ZKSCAN4Q969J2 545 aaPredicted RBP26.02■■□□□ 1.76
SYNE4-205ENST00000490730 TNNQ9UQP3 1299 aa26.02■■□□□ 1.76
SYNE4-205ENST00000490730 TRIM17Q9Y577 477 aa26.02■■□□□ 1.76
SYNE4-205ENST00000490730 SEMA3EO15041 775 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms