RNA–Protein interactions for RNA: ENST00000490673.5

OPN3-206, Transcript of opsin 3, humanhuman

TSL 1 (best)

Gene OPN3, Length 1,816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3-206ENST00000490673 TRAF5O00463 557 aa28.34■■■□□ 2.13
OPN3-206ENST00000490673 HDAC1Q13547 482 aaPredicted RBP28.34■■■□□ 2.13
OPN3-206ENST00000490673 MRIQ9BWK5 157 aa28.34■■■□□ 2.13
OPN3-206ENST00000490673 POLR2AP24928 1970 aaKnown RBP28.34■■■□□ 2.13
OPN3-206ENST00000490673 SPDYE2BA6NHP3 402 aa28.34■■■□□ 2.13
OPN3-206ENST00000490673 SPDYE6P0CI01 402 aa28.34■■■□□ 2.13
OPN3-206ENST00000490673 DLK2Q6UY11 383 aa28.34■■■□□ 2.13
OPN3-206ENST00000490673 DCPSQ96C86 337 aaKnown RBP28.34■■■□□ 2.13
OPN3-206ENST00000490673 CRKP46108 304 aa28.33■■■□□ 2.13
OPN3-206ENST00000490673 SCAF8Q9UPN6 1271 aaKnown RBP28.33■■■□□ 2.13
OPN3-206ENST00000490673 AOX1Q06278 1338 aa28.33■■■□□ 2.13
OPN3-206ENST00000490673 MYH13Q9UKX3 1938 aa28.32■■■□□ 2.12
OPN3-206ENST00000490673 RBM5P52756 815 aaKnown RBP eCLIP28.32■■■□□ 2.12
OPN3-206ENST00000490673 HDLBPQ00341 1268 aaKnown RBP28.32■■■□□ 2.12
OPN3-206ENST00000490673 KRT26Q7Z3Y9 468 aa28.32■■■□□ 2.12
OPN3-206ENST00000490673 USP48Q86UV5 1035 aa28.32■■■□□ 2.12
OPN3-206ENST00000490673 SNRKQ9NRH2 765 aa28.32■■■□□ 2.12
OPN3-206ENST00000490673 ABCF2Q9UG63 623 aa28.32■■■□□ 2.12
OPN3-206ENST00000490673 IFIT2P09913 472 aaKnown RBP28.32■■■□□ 2.12
OPN3-206ENST00000490673 APLP1P51693 650 aa28.32■■■□□ 2.12
OPN3-206ENST00000490673 TBC1D9Q6ZT07 1266 aa28.32■■■□□ 2.12
OPN3-206ENST00000490673 LDHBP07195 334 aaKnown RBP28.31■■■□□ 2.12
OPN3-206ENST00000490673 ZGPATQ8N5A5 531 aaKnown RBP28.31■■■□□ 2.12
OPN3-206ENST00000490673 PITPNM2Q9BZ72 1349 aa28.3■■■□□ 2.12
OPN3-206ENST00000490673 TEKT1Q969V4 418 aa28.29■■■□□ 2.12
OPN3-206ENST00000490673 ADM5C9JUS6 153 aa28.29■■■□□ 2.12
OPN3-206ENST00000490673 MAST3O60307 1309 aa28.28■■■□□ 2.12
OPN3-206ENST00000490673 IGHDP01880 384 aa28.28■■■□□ 2.12
OPN3-206ENST00000490673 CYP2E1P05181 493 aaPredicted RBP28.28■■■□□ 2.12
OPN3-206ENST00000490673 HTRA3P83110 453 aa28.28■■■□□ 2.12
OPN3-206ENST00000490673 DIXDC1Q155Q3 683 aa28.28■■■□□ 2.12
OPN3-206ENST00000490673 HHIPL2Q6UWX4 724 aa28.28■■■□□ 2.12
OPN3-206ENST00000490673 SULF1Q8IWU6 871 aa28.28■■■□□ 2.12
OPN3-206ENST00000490673 ZDHHC15Q96MV8 337 aa28.28■■■□□ 2.12
OPN3-206ENST00000490673 ZAP70P43403 619 aa28.27■■■□□ 2.12
OPN3-206ENST00000490673 CST9Q5W186 159 aa28.27■■■□□ 2.12
OPN3-206ENST00000490673 APOBEC3HQ6NTF7 200 aaKnown RBP28.27■■■□□ 2.12
OPN3-206ENST00000490673 AKAP11Q9UKA4 1901 aa28.27■■■□□ 2.12
OPN3-206ENST00000490673 ZNF384Q8TF68 577 aa28.27■■■□□ 2.12
OPN3-206ENST00000490673 NDUFB9Q9Y6M9 179 aa28.27■■■□□ 2.12
OPN3-206ENST00000490673 TDRD3Q9H7E2 651 aaKnown RBP28.26■■■□□ 2.11
OPN3-206ENST00000490673 CLRN2A0PK11 232 aa28.25■■■□□ 2.11
OPN3-206ENST00000490673 MYO1BO43795 1136 aa28.25■■■□□ 2.11
OPN3-206ENST00000490673 SPTY2D1Q68D10 685 aaPredicted RBP28.25■■■□□ 2.11
OPN3-206ENST00000490673 ERICH6Q7L0X2 663 aa28.25■■■□□ 2.11
OPN3-206ENST00000490673 GCC1Q96CN9 775 aa28.25■■■□□ 2.11
OPN3-206ENST00000490673 RWDD1Q9H446 243 aaPredicted RBP28.25■■■□□ 2.11
OPN3-206ENST00000490673 DAGLAQ9Y4D2 1042 aa28.24■■■□□ 2.11
OPN3-206ENST00000490673 MECOMQ03112 1051 aa28.23■■■□□ 2.11
OPN3-206ENST00000490673 SPDYE2Q495Y8 402 aa28.23■■■□□ 2.11
OPN3-206ENST00000490673 ZNF70Q9UC06 446 aaPredicted RBP28.23■■■□□ 2.11
OPN3-206ENST00000490673 TMEM88BA6NKF7 163 aa28.22■■■□□ 2.11
OPN3-206ENST00000490673 PRAMEF18Q5VWM3 479 aa28.22■■■□□ 2.11
OPN3-206ENST00000490673 DZIP1Q86YF9 867 aaKnown RBP28.22■■■□□ 2.11
OPN3-206ENST00000490673 NSUN4Q96CB9 384 aaKnown RBP28.22■■■□□ 2.11
OPN3-206ENST00000490673 FAM163AQ96GL9 167 aaPredicted RBP28.22■■■□□ 2.11
OPN3-206ENST00000490673 ANTXR1Q9H6X2 564 aa28.22■■■□□ 2.11
OPN3-206ENST00000490673 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.22■■■□□ 2.115e-9■■■■□ 19.8
OPN3-206ENST00000490673 PIH1D3Q9NQM4 214 aaKnown RBP28.22■■■□□ 2.11
OPN3-206ENST00000490673 CREBZFQ9NS37 354 aa28.22■■■□□ 2.11
OPN3-206ENST00000490673 LRP2BPQ9P2M1 347 aa28.22■■■□□ 2.11
OPN3-206ENST00000490673 CELF2O95319 508 aaKnown RBP28.21■■■□□ 2.11
OPN3-206ENST00000490673 ANKRD45Q5TZF3 282 aa28.21■■■□□ 2.11
OPN3-206ENST00000490673 APOBEC3FQ8IUX4 373 aaKnown RBP28.21■■■□□ 2.11
OPN3-206ENST00000490673 SMC5Q8IY18 1101 aa28.21■■■□□ 2.11
OPN3-206ENST00000490673 DEFB129Q9H1M3 183 aa28.21■■■□□ 2.11
OPN3-206ENST00000490673 VEZTQ9HBM0 779 aa28.21■■■□□ 2.11
OPN3-206ENST00000490673 ATP5JP18859 108 aa28.2■■■□□ 2.11
OPN3-206ENST00000490673 CDCA5Q96FF9 252 aa28.2■■■□□ 2.11
OPN3-206ENST00000490673 RAI14Q9P0K7 980 aa28.2■■■□□ 2.11
OPN3-206ENST00000490673 ZNF408Q9H9D4 720 aa28.2■■■□□ 2.1
OPN3-206ENST00000490673 GAKO14976 1311 aa28.19■■■□□ 2.1
OPN3-206ENST00000490673 BOLA2Q9H3K6 86 aa28.19■■■□□ 2.1
OPN3-206ENST00000490673 CACNB3P54284 484 aa28.18■■■□□ 2.1
OPN3-206ENST00000490673 OTUD7AQ8TE49 926 aaPredicted RBP28.18■■■□□ 2.1
OPN3-206ENST00000490673 ECHDC1Q9NTX5 307 aa28.18■■■□□ 2.1
OPN3-206ENST00000490673 CDC42EP5Q6NZY7 148 aa28.17■■■□□ 2.1
OPN3-206ENST00000490673 RASA3Q14644 834 aa28.16■■■□□ 2.1
OPN3-206ENST00000490673 SLF2Q8IX21 1173 aa28.16■■■□□ 2.1
OPN3-206ENST00000490673 DNAJC5GQ8N7S2 189 aa28.16■■■□□ 2.1
OPN3-206ENST00000490673 TSHZ3Q63HK5 1081 aa28.15■■■□□ 2.1
OPN3-206ENST00000490673 EDC3Q96F86 508 aaKnown RBP28.15■■■□□ 2.1
OPN3-206ENST00000490673 DNAJC2Q99543 621 aaKnown RBP28.15■■■□□ 2.1
OPN3-206ENST00000490673 MROH7-TTC4A0A0A0MT08 1334 aa28.15■■■□□ 2.1
OPN3-206ENST00000490673 GPR75-ASB3A0A0A6YYF3 556 aa28.15■■■□□ 2.1
OPN3-206ENST00000490673 TCP10L2B9ZVM9 353 aa28.15■■■□□ 2.1
OPN3-206ENST00000490673 ECM29Q5VYK3 1845 aa28.15■■■□□ 2.1
OPN3-206ENST00000490673 HAUS7Q99871 368 aa28.15■■■□□ 2.1
OPN3-206ENST00000490673 MYH2Q9UKX2 1941 aa28.14■■■□□ 2.1
OPN3-206ENST00000490673 TRPM7Q96QT4 1865 aa28.14■■■□□ 2.1
OPN3-206ENST00000490673 GSTO1P78417 241 aa28.14■■■□□ 2.1
OPN3-206ENST00000490673 B4GALNT3Q6L9W6 998 aa28.14■■■□□ 2.1
OPN3-206ENST00000490673 USP40Q9NVE5 1235 aa28.14■■■□□ 2.1
OPN3-206ENST00000490673 GOLIM4O00461 696 aa28.13■■■□□ 2.09
OPN3-206ENST00000490673 IGSF3O75054 1194 aa28.13■■■□□ 2.09
OPN3-206ENST00000490673 IDH1O75874 414 aaKnown RBP28.13■■■□□ 2.09
OPN3-206ENST00000490673 LDHCP07864 332 aa28.13■■■□□ 2.09
OPN3-206ENST00000490673 BTDP43251 543 aa28.13■■■□□ 2.09
OPN3-206ENST00000490673 TNFAIP1Q13829 316 aa28.13■■■□□ 2.09
OPN3-206ENST00000490673 FKBP1CQ5VVH2 108 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms