RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 HP1BP3Q5SSJ5 553 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P38-201ENST00000490557 MEI1Q5TIA1 1274 aa8.18□□□□□ -1.1
HMGB1P38-201ENST00000490557 SHISA2Q6UWI4 295 aa8.18□□□□□ -1.1
HMGB1P38-201ENST00000490557 FOXD4L3Q6VB84 417 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P38-201ENST00000490557 DDX3YO15523 660 aaKnown RBP8.17□□□□□ -1.1
HMGB1P38-201ENST00000490557 KCNMA1Q12791 1236 aa8.17□□□□□ -1.1
HMGB1P38-201ENST00000490557 POU4F3Q15319 338 aa8.17□□□□□ -1.1
HMGB1P38-201ENST00000490557 ACAD11Q709F0 780 aa8.17□□□□□ -1.1
HMGB1P38-201ENST00000490557 SV2BQ7L1I2 683 aa8.17□□□□□ -1.1
HMGB1P38-201ENST00000490557 TMEM87AQ8NBN3 555 aa8.17□□□□□ -1.1
HMGB1P38-201ENST00000490557 DCAF5Q96JK2 942 aa8.17□□□□□ -1.1
HMGB1P38-201ENST00000490557 CBX8Q9HC52 389 aa8.17□□□□□ -1.1
HMGB1P38-201ENST00000490557 GDF11O95390 407 aa8.16□□□□□ -1.1
HMGB1P38-201ENST00000490557 LMNB1P20700 586 aa8.16□□□□□ -1.1
HMGB1P38-201ENST00000490557 ST13P50502 369 aaKnown RBP8.16□□□□□ -1.1
HMGB1P38-201ENST00000490557 SULF2Q8IWU5 870 aa8.16□□□□□ -1.1
HMGB1P38-201ENST00000490557 TMEM151AQ8N4L1 468 aa8.16□□□□□ -1.1
HMGB1P38-201ENST00000490557 LENG1Q96BZ8 264 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P38-201ENST00000490557 NECAB3Q96P71 396 aaPredicted RBP8.16□□□□□ -1.1
HMGB1P38-201ENST00000490557 EMILIN2Q9BXX0 1053 aa8.16□□□□□ -1.1
HMGB1P38-201ENST00000490557 KCNK4Q9NYG8 393 aa8.16□□□□□ -1.1
HMGB1P38-201ENST00000490557 ADAM11O75078 769 aa8.15□□□□□ -1.1
HMGB1P38-201ENST00000490557 CTSHP09668 335 aa8.15□□□□□ -1.1
HMGB1P38-201ENST00000490557 SELPP16109 830 aa8.15□□□□□ -1.1
HMGB1P38-201ENST00000490557 NME2P22392 152 aa8.15□□□□□ -1.1
HMGB1P38-201ENST00000490557 MAOBP27338 520 aa8.15□□□□□ -1.1
HMGB1P38-201ENST00000490557 PDE3AQ14432 1141 aa8.15□□□□□ -1.1
HMGB1P38-201ENST00000490557 ANKRD24Q8TF21 1146 aa8.15□□□□□ -1.1
HMGB1P38-201ENST00000490557 UBASH3BQ8TF42 649 aa8.15□□□□□ -1.1
HMGB1P38-201ENST00000490557 ZNF428Q96B54 188 aa8.15□□□□□ -1.1
HMGB1P38-201ENST00000490557 USP31Q70CQ4 1352 aa8.14□□□□□ -1.11
HMGB1P38-201ENST00000490557 UNCXA6NJT0 531 aa8.14□□□□□ -1.11
HMGB1P38-201ENST00000490557 RLBP1P12271 317 aa8.14□□□□□ -1.11
HMGB1P38-201ENST00000490557 RUSC1Q9BVN2 902 aa8.14□□□□□ -1.11
HMGB1P38-201ENST00000490557 AKTIPQ9H8T0 292 aa8.14□□□□□ -1.11
HMGB1P38-201ENST00000490557 KRBA1A5PL33 1030 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 ENC1O14682 589 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 CELA3AP09093 270 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 VAMP1P23763 118 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 ARNTP27540 789 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 LRRC14Q15048 493 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 MAP3K11Q16584 847 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 NUTM2GQ5VZR2 741 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 KCNB2Q92953 911 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 TRIM56Q9BRZ2 755 aaKnown RBP8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 NOC4LQ9BVI4 516 aaKnown RBP8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 BACH2Q9BYV9 841 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 ZC3H12CQ9C0D7 883 aaKnown RBP8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 RNF208Q9H0X6 261 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 RAD18Q9NS91 495 aa8.13□□□□□ -1.11
HMGB1P38-201ENST00000490557 LOC100289279A0A1B0GTE1 492 aa8.12□□□□□ -1.11
HMGB1P38-201ENST00000490557 WISP1O95388 367 aa8.12□□□□□ -1.11
HMGB1P38-201ENST00000490557 GSTP1P09211 210 aaKnown RBP8.12□□□□□ -1.11
HMGB1P38-201ENST00000490557 PCNX4Q63HM2 1172 aa8.12□□□□□ -1.11
HMGB1P38-201ENST00000490557 DIEXFQ68CQ4 756 aaKnown RBP8.12□□□□□ -1.11
HMGB1P38-201ENST00000490557 TTBK2Q6IQ55 1244 aa8.12□□□□□ -1.11
HMGB1P38-201ENST00000490557 FDX2Q6P4F2 183 aa8.12□□□□□ -1.11
HMGB1P38-201ENST00000490557 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.12□□□□□ -1.11
HMGB1P38-201ENST00000490557 C1QTNF9BB2RNN3 333 aa8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 E9PSI1 815 aa8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 F8W735 103 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 TM4SF5O14894 197 aa8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 PAGE1O75459 146 aa8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 GLB1P16278 677 aa8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 MAP1SQ66K74 1059 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 HS2ST1Q7LGA3 356 aa8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 AGGF1Q8N302 714 aaeCLIP8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 TMEM130Q8N3G9 435 aa8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 ACSBG1Q96GR2 724 aa8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 CYP4F12Q9HCS2 524 aa8.11□□□□□ -1.11
HMGB1P38-201ENST00000490557 SART1O43290 800 aaKnown RBP8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 ZNF76P36508 570 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 CHRNA4P43681 627 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 IREB2P48200 963 aaKnown RBP8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 PWP1Q13610 501 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 ADGRE1Q14246 886 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 MBTPS1Q14703 1052 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 EXOSC6Q5RKV6 272 aaKnown RBP8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 LLGL2Q6P1M3 1020 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 KIAA1211Q6ZU35 1233 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 CD163Q86VB7 1156 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 TXNRD3Q86VQ6 643 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 RELL1Q8IUW5 271 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 WFDC12Q8WWY7 111 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 CEP41Q9BYV8 373 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 KIAA1522Q9P206 1035 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 CYP8B1Q9UNU6 501 aa8.1□□□□□ -1.11
HMGB1P38-201ENST00000490557 SCAMP3O14828 347 aaKnown RBP8.09□□□□□ -1.11
HMGB1P38-201ENST00000490557 ALX3O95076 343 aa8.09□□□□□ -1.11
HMGB1P38-201ENST00000490557 RECKO95980 971 aa8.09□□□□□ -1.11
HMGB1P38-201ENST00000490557 LIG3P49916 1009 aa8.09□□□□□ -1.11
HMGB1P38-201ENST00000490557 NRSN2Q9GZP1 204 aa8.09□□□□□ -1.11
HMGB1P38-201ENST00000490557 GGT7Q9UJ14 662 aa8.09□□□□□ -1.11
HMGB1P38-201ENST00000490557 ECEL1O95672 775 aa8.08□□□□□ -1.12
HMGB1P38-201ENST00000490557 SLFN14P0C7P3 912 aa8.08□□□□□ -1.12
HMGB1P38-201ENST00000490557 GATA4P43694 442 aa8.08□□□□□ -1.12
HMGB1P38-201ENST00000490557 ANKRD34AQ69YU3 496 aa8.08□□□□□ -1.12
HMGB1P38-201ENST00000490557 C12orf50Q8NA57 414 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P38-201ENST00000490557 RNF34Q969K3 372 aa8.08□□□□□ -1.12
HMGB1P38-201ENST00000490557 METTL5Q9NRN9 209 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms