RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ZNF70Q9UC06 446 aaPredicted RBP17.73■□□□□ 0.43
EXOSC3-207ENST00000490516 JAG2Q9Y219 1238 aa17.73■□□□□ 0.43
EXOSC3-207ENST00000490516 SPDYE5A6NIY4 337 aa17.72■□□□□ 0.43
EXOSC3-207ENST00000490516 SNAP23O00161 211 aa17.72■□□□□ 0.43
EXOSC3-207ENST00000490516 HOXD10P28358 340 aa17.72■□□□□ 0.43
EXOSC3-207ENST00000490516 BCAMP50895 628 aa17.72■□□□□ 0.43
EXOSC3-207ENST00000490516 TMEM39BQ9GZU3 492 aa17.72■□□□□ 0.43
EXOSC3-207ENST00000490516 A0A1B0GUL6 1792 aa17.71■□□□□ 0.43
EXOSC3-207ENST00000490516 IGHMBP2P38935 993 aaKnown RBP17.71■□□□□ 0.43
EXOSC3-207ENST00000490516 KCNJ4P48050 445 aa17.71■□□□□ 0.43
EXOSC3-207ENST00000490516 PRKCZQ05513 592 aa17.71■□□□□ 0.43
EXOSC3-207ENST00000490516 TNFAIP1Q13829 316 aa17.71■□□□□ 0.43
EXOSC3-207ENST00000490516 NEUROD2Q15784 382 aa17.71■□□□□ 0.43
EXOSC3-207ENST00000490516 SPDYE2Q495Y8 402 aa17.71■□□□□ 0.43
EXOSC3-207ENST00000490516 ANKRD2Q9GZV1 360 aa17.71■□□□□ 0.43
EXOSC3-207ENST00000490516 TDRD3Q9H7E2 651 aaKnown RBP17.71■□□□□ 0.43
EXOSC3-207ENST00000490516 SNCAIPQ9Y6H5 919 aa17.71■□□□□ 0.43
EXOSC3-207ENST00000490516 IRS2Q9Y4H2 1338 aa17.71■□□□□ 0.42
EXOSC3-207ENST00000490516 TCP10L2B9ZVM9 353 aa17.7■□□□□ 0.42
EXOSC3-207ENST00000490516 IRF6O14896 467 aa17.7■□□□□ 0.42
EXOSC3-207ENST00000490516 TFRCP02786 760 aaKnown RBP17.7■□□□□ 0.42
EXOSC3-207ENST00000490516 SNAPC2Q13487 334 aa17.7■□□□□ 0.42
EXOSC3-207ENST00000490516 LRIT3Q3SXY7 679 aa17.7■□□□□ 0.42
EXOSC3-207ENST00000490516 HELBQ8NG08 1087 aaPredicted RBP17.7■□□□□ 0.42
EXOSC3-207ENST00000490516 METTL22Q9BUU2 404 aaPredicted RBP17.7■□□□□ 0.42
EXOSC3-207ENST00000490516 ZMYND8Q9ULU4 1186 aaPredicted RBP17.7■□□□□ 0.42
EXOSC3-207ENST00000490516 ERO1BQ86YB8 467 aa17.69■□□□□ 0.42
EXOSC3-207ENST00000490516 C7orf61Q8IZ16 206 aa17.69■□□□□ 0.42
EXOSC3-207ENST00000490516 PRDM6Q9NQX0 595 aa17.69■□□□□ 0.42
EXOSC3-207ENST00000490516 CHRNDQ07001 517 aa17.68■□□□□ 0.42
EXOSC3-207ENST00000490516 ZKSCAN4Q969J2 545 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-207ENST00000490516 PAWRQ96IZ0 340 aaKnown RBP17.68■□□□□ 0.42
EXOSC3-207ENST00000490516 SPTBN5Q9NRC6 3674 aaKnown RBP17.68■□□□□ 0.42
EXOSC3-207ENST00000490516 GABRQQ9UN88 632 aa17.68■□□□□ 0.42
EXOSC3-207ENST00000490516 ADGRA2Q96PE1 1338 aa17.68■□□□□ 0.42
EXOSC3-207ENST00000490516 IL1R1P14778 569 aa17.67■□□□□ 0.42
EXOSC3-207ENST00000490516 FKBP1AP62942 108 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-207ENST00000490516 SLAIN1Q8ND83 568 aa17.67■□□□□ 0.42
EXOSC3-207ENST00000490516 DIS3LQ8TF46 1054 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-207ENST00000490516 DEFB118Q96PH6 123 aa17.67■□□□□ 0.42
EXOSC3-207ENST00000490516 MPHOSPH8Q99549 860 aa17.67■□□□□ 0.42
EXOSC3-207ENST00000490516 PDHXO00330 501 aa17.66■□□□□ 0.42
EXOSC3-207ENST00000490516 TAF5LO75529 589 aa17.66■□□□□ 0.42
EXOSC3-207ENST00000490516 IGKV5-2P06315 115 aa17.66■□□□□ 0.42
EXOSC3-207ENST00000490516 SYN1P17600 705 aa17.66■□□□□ 0.42
EXOSC3-207ENST00000490516 ITGA6P23229 1130 aa17.66■□□□□ 0.42
EXOSC3-207ENST00000490516 TDHQ8IZJ6 230 aa17.66■□□□□ 0.42
EXOSC3-207ENST00000490516 TRIM35Q9UPQ4 493 aa17.66■□□□□ 0.42
EXOSC3-207ENST00000490516 MAP3K2Q9Y2U5 619 aa17.66■□□□□ 0.42
EXOSC3-207ENST00000490516 ADCY3O60266 1144 aa17.65■□□□□ 0.42
EXOSC3-207ENST00000490516 ELNP15502 786 aa17.65■□□□□ 0.42
EXOSC3-207ENST00000490516 MAGEA10P43363 369 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-207ENST00000490516 PPIL2Q13356 520 aa17.65■□□□□ 0.42
EXOSC3-207ENST00000490516 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.65■□□□□ 0.42
EXOSC3-207ENST00000490516 WRNIP1Q96S55 665 aa17.65■□□□□ 0.42
EXOSC3-207ENST00000490516 EYSQ5T1H1 3165 aa17.65■□□□□ 0.42
EXOSC3-207ENST00000490516 RPTORQ8N122 1335 aa17.65■□□□□ 0.42
EXOSC3-207ENST00000490516 INHAP05111 366 aa17.64■□□□□ 0.41
EXOSC3-207ENST00000490516 C15orf52Q6ZUT6 534 aaKnown RBP17.64■□□□□ 0.41
EXOSC3-207ENST00000490516 ZNF804AQ7Z570 1209 aa17.64■□□□□ 0.41
EXOSC3-207ENST00000490516 ANKRD23Q86SG2 305 aa17.64■□□□□ 0.41
EXOSC3-207ENST00000490516 DZIP1LQ8IYY4 767 aaKnown RBP17.64■□□□□ 0.41
EXOSC3-207ENST00000490516 TTF2Q9UNY4 1162 aaKnown RBP17.64■□□□□ 0.41
EXOSC3-207ENST00000490516 ELL2O00472 640 aaPredicted RBP17.63■□□□□ 0.41
EXOSC3-207ENST00000490516 TNNI2P48788 182 aa17.63■□□□□ 0.41
EXOSC3-207ENST00000490516 FCGRTP55899 365 aa17.63■□□□□ 0.41
EXOSC3-207ENST00000490516 CWF19L2Q2TBE0 894 aaKnown RBP17.63■□□□□ 0.41
EXOSC3-207ENST00000490516 NECAB2Q7Z6G3 386 aa17.63■□□□□ 0.41
EXOSC3-207ENST00000490516 CCDC146Q8IYE0 955 aa17.63■□□□□ 0.41
EXOSC3-207ENST00000490516 GUCD1Q96NT3 240 aa17.63■□□□□ 0.41
EXOSC3-207ENST00000490516 SERPINA10Q9UK55 444 aa17.63■□□□□ 0.41
EXOSC3-207ENST00000490516 CACNB3P54284 484 aa17.62■□□□□ 0.41
EXOSC3-207ENST00000490516 UBE3BQ7Z3V4 1068 aa17.62■□□□□ 0.41
EXOSC3-207ENST00000490516 CRISPLD2Q9H0B8 497 aa17.62■□□□□ 0.41
EXOSC3-207ENST00000490516 PAK6Q9NQU5 681 aaPredicted RBP17.62■□□□□ 0.41
EXOSC3-207ENST00000490516 MBIPQ9NS73 344 aa17.62■□□□□ 0.41
EXOSC3-207ENST00000490516 DOCK3Q8IZD9 2030 aa17.62■□□□□ 0.41
EXOSC3-207ENST00000490516 DDX60LQ5H9U9 1706 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-207ENST00000490516 DDX58O95786 925 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-207ENST00000490516 BCRP11274 1271 aa17.61■□□□□ 0.41
EXOSC3-207ENST00000490516 FLT3LGP49771 235 aa17.61■□□□□ 0.41
EXOSC3-207ENST00000490516 UBE2OQ9C0C9 1292 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-207ENST00000490516 H7C1W4 665 aa17.6■□□□□ 0.41
EXOSC3-207ENST00000490516 CRKP46108 304 aa17.6■□□□□ 0.41
EXOSC3-207ENST00000490516 PPATQ06203 517 aa17.6■□□□□ 0.41
EXOSC3-207ENST00000490516 MOGSQ13724 837 aa17.6■□□□□ 0.41
EXOSC3-207ENST00000490516 MFSD14BQ5SR56 506 aa17.6■□□□□ 0.41
EXOSC3-207ENST00000490516 FAM161BQ96MY7 647 aa17.6■□□□□ 0.41
EXOSC3-207ENST00000490516 FAM205AQ6ZU69 1335 aa17.59■□□□□ 0.41
EXOSC3-207ENST00000490516 PI4KAP2A4QPH2 592 aa17.59■□□□□ 0.41
EXOSC3-207ENST00000490516 CYP2C8P10632 490 aa17.59■□□□□ 0.41
EXOSC3-207ENST00000490516 CAPN2P17655 700 aa17.59■□□□□ 0.41
EXOSC3-207ENST00000490516 PI4KAP1Q8N8J0 262 aa17.59■□□□□ 0.41
EXOSC3-207ENST00000490516 NEURL1BA8MQ27 555 aa17.58■□□□□ 0.4
EXOSC3-207ENST00000490516 COL9A1P20849 921 aa17.58■□□□□ 0.4
EXOSC3-207ENST00000490516 INPP5BP32019 993 aa17.58■□□□□ 0.4
EXOSC3-207ENST00000490516 KSR2Q6VAB6 950 aa17.58■□□□□ 0.4
EXOSC3-207ENST00000490516 CCER1Q8TC90 406 aaPredicted RBP17.58■□□□□ 0.4
EXOSC3-207ENST00000490516 PXYLP1Q8TE99 480 aa17.58■□□□□ 0.4
EXOSC3-207ENST00000490516 LAMA2P24043 3122 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms