RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 FBXO24O75426 580 aa7.41□□□□□ -1.22
SSX2IP-208ENST00000490476 RACK1P63244 317 aaKnown RBP7.41□□□□□ -1.22
SSX2IP-208ENST00000490476 NEUROD1Q13562 356 aa7.41□□□□□ -1.22
SSX2IP-208ENST00000490476 SF3A1Q15459 793 aaKnown RBP7.41□□□□□ -1.22
SSX2IP-208ENST00000490476 FOXR1Q6PIV2 292 aa7.41□□□□□ -1.22
SSX2IP-208ENST00000490476 VWA5B2Q8N398 1253 aa7.41□□□□□ -1.22
SSX2IP-208ENST00000490476 SPACA7Q96KW9 195 aa7.41□□□□□ -1.22
SSX2IP-208ENST00000490476 TRERF1Q96PN7 1200 aa7.41□□□□□ -1.22
SSX2IP-208ENST00000490476 COPRSQ9NQ92 184 aa7.41□□□□□ -1.22
SSX2IP-208ENST00000490476 DDX41Q9UJV9 622 aaKnown RBP7.41□□□□□ -1.22
SSX2IP-208ENST00000490476 PHF24Q9UPV7 400 aa7.41□□□□□ -1.22
SSX2IP-208ENST00000490476 TMEM238LA0A1B0GVL6 79 aa7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 J3QW42 95 aa7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 MAP3K6O95382 1288 aa7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 PRELPP51888 382 aa7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 CTBSQ01459 385 aa7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 GNL2Q13823 731 aaKnown RBP7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 CCDC85BQ15834 202 aaPredicted RBP7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 GMCL1Q96IK5 515 aa7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 HHIPQ96QV1 700 aa7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 TINF2Q9BSI4 451 aa7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 TANGO6Q9C0B7 1094 aa7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 AGLP35573 1532 aa7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 DNMT1P26358 1616 aaKnown RBP7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 COL16A1Q07092 1604 aaPredicted RBP7.4□□□□□ -1.22
SSX2IP-208ENST00000490476 IQGAP1P46940 1657 aa7.4□□□□□ -1.23
SSX2IP-208ENST00000490476 CAMTA1Q9Y6Y1 1673 aa7.4□□□□□ -1.23
SSX2IP-208ENST00000490476 METTL12A8MUP2 240 aa7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 DNAJA1P31689 397 aaKnown RBP7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 SOX18P35713 384 aa7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 ST13P50502 369 aaKnown RBP7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 PTPN12Q05209 780 aaKnown RBP7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 MAP3K11Q16584 847 aa7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 C3orf58Q8NDZ4 430 aa7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 ASAP3Q8TDY4 903 aa7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 IRF7Q92985 503 aa7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 CNTNAP3BQ96NU0 1288 aa7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 TCF12Q99081 682 aa7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 CNTNAP3Q9BZ76 1288 aa7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 UBE2OQ9C0C9 1292 aaKnown RBP7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 ABCB6Q9NP58 842 aa7.39□□□□□ -1.23
SSX2IP-208ENST00000490476 CNTLNQ9NXG0 1405 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 H3BM21 787 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 PPFIA3O75145 1194 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 KIF4AO95239 1232 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 SPRED3Q2MJR0 410 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 TPTE2Q6XPS3 522 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 CEP120Q8N960 986 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 TRIM56Q9BRZ2 755 aaKnown RBP7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 EFCC1Q9HA90 598 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 SRA1Q9HD15 236 aaKnown RBP7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 DZANK1Q9NVP4 752 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 KBTBD4Q9NVX7 518 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 PRKAG2Q9UGJ0 569 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 ADGBQ8N7X0 1667 aa7.38□□□□□ -1.23
SSX2IP-208ENST00000490476 REREQ9P2R6 1566 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 LOC102724428A0A0B4J2F2 783 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 MINDY4BA8MYZ0 360 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 ZBTB42B2RXF5 422 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 GHRHP01286 108 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 BMP4P12644 408 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 GRIA4P48058 902 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 NRLP54845 237 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 SIK1P57059 783 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 PCBP4P57723 403 aaKnown RBP7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 ATP11AP98196 1134 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 PRPF40BQ6NWY9 871 aaKnown RBP7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 SYT9Q86SS6 491 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 CCNJLQ8IV13 435 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 RASSF4Q9H2L5 321 aa7.37□□□□□ -1.23
SSX2IP-208ENST00000490476 SPATA31A6Q5VVP1 1343 aa7.36□□□□□ -1.23
SSX2IP-208ENST00000490476 XRCC5P13010 732 aaKnown RBP7.36□□□□□ -1.23
SSX2IP-208ENST00000490476 EIF2AK2P19525 551 aaKnown RBP7.36□□□□□ -1.23
SSX2IP-208ENST00000490476 RBM6P78332 1123 aaKnown RBP7.36□□□□□ -1.23
SSX2IP-208ENST00000490476 FAM182BQ5T319 152 aa7.36□□□□□ -1.23
SSX2IP-208ENST00000490476 SV2AQ7L0J3 742 aa7.36□□□□□ -1.23
SSX2IP-208ENST00000490476 ERMP1Q7Z2K6 904 aa7.36□□□□□ -1.23
SSX2IP-208ENST00000490476 RELL1Q8IUW5 271 aa7.36□□□□□ -1.23
SSX2IP-208ENST00000490476 UBXN4Q92575 508 aa7.36□□□□□ -1.23
SSX2IP-208ENST00000490476 DNAJB12Q9NXW2 375 aaKnown RBP7.36□□□□□ -1.23
SSX2IP-208ENST00000490476 DEPDC5O75140 1603 aa7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 DIP2CQ9Y2E4 1556 aa7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 PDE2AO00408 941 aaPredicted RBP7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 CPB1P15086 417 aa7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 GBP2P32456 591 aaPredicted RBP7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 GTF2F1P35269 517 aaKnown RBP eCLIP7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 GPLD1P80108 840 aa7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 SLC43A3Q8NBI5 491 aa7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 TRPM4Q8TD43 1214 aa7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 NXPE3Q969Y0 559 aa7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 NOC4LQ9BVI4 516 aaKnown RBP7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 UGGT2Q9NYU1 1516 aa7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 LRRC9Q6ZRR7 1453 aa7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 ITSN2Q9NZM3 1697 aa7.35□□□□□ -1.23
SSX2IP-208ENST00000490476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 A0A096LPE4 126 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 A0A1W2PPZ6 126 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 C2CD2LO14523 706 aa7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 HOXD8P13378 290 aaPredicted RBP7.34□□□□□ -1.23
SSX2IP-208ENST00000490476 ATP2B1P20020 1258 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms