RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 TCP10L2B9ZVM9 353 aa22.31■■□□□ 1.16
YIPF3-208ENST00000490447 PDE8BO95263 885 aa22.31■■□□□ 1.16
YIPF3-208ENST00000490447 FBXO33Q7Z6M2 555 aa22.31■■□□□ 1.16
YIPF3-208ENST00000490447 ANKRD44Q8N8A2 993 aa22.31■■□□□ 1.16
YIPF3-208ENST00000490447 IGF2BP3O00425 579 aaKnown RBP eCLIP22.31■■□□□ 1.16
YIPF3-208ENST00000490447 ELP3Q9H9T3 547 aa22.31■■□□□ 1.16
YIPF3-208ENST00000490447 ARAP2Q8WZ64 1704 aa22.3■■□□□ 1.16
YIPF3-208ENST00000490447 SSH1Q8WYL5 1049 aa22.3■■□□□ 1.16
YIPF3-208ENST00000490447 TEKT1Q969V4 418 aa22.3■■□□□ 1.16
YIPF3-208ENST00000490447 TRIM17Q9Y577 477 aa22.3■■□□□ 1.16
YIPF3-208ENST00000490447 SLC34A2O95436 690 aa22.29■■□□□ 1.16
YIPF3-208ENST00000490447 IFIT1P09914 478 aaKnown RBP22.29■■□□□ 1.16
YIPF3-208ENST00000490447 PUM3Q15397 648 aaKnown RBP22.29■■□□□ 1.16
YIPF3-208ENST00000490447 KLHDC4Q8TBB5 520 aa22.29■■□□□ 1.16
YIPF3-208ENST00000490447 OPTNQ96CV9 577 aa22.29■■□□□ 1.16
YIPF3-208ENST00000490447 TMEM39BQ9GZU3 492 aa22.29■■□□□ 1.16
YIPF3-208ENST00000490447 TMOD2Q9NZR1 351 aa22.29■■□□□ 1.16
YIPF3-208ENST00000490447 GJA5P36382 358 aa22.28■■□□□ 1.16
YIPF3-208ENST00000490447 HDLBPQ00341 1268 aaKnown RBP22.28■■□□□ 1.16
YIPF3-208ENST00000490447 VGLL2Q8N8G2 317 aa22.28■■□□□ 1.16
YIPF3-208ENST00000490447 MAST3O60307 1309 aa22.27■■□□□ 1.16
YIPF3-208ENST00000490447 BCAMP50895 628 aa22.27■■□□□ 1.16
YIPF3-208ENST00000490447 GRIK5Q16478 980 aa22.27■■□□□ 1.16
YIPF3-208ENST00000490447 ERO1AQ96HE7 468 aa22.27■■□□□ 1.16
YIPF3-208ENST00000490447 TEPSINQ96N21 525 aa22.27■■□□□ 1.16
YIPF3-208ENST00000490447 USP44Q9H0E7 712 aa22.27■■□□□ 1.16
YIPF3-208ENST00000490447 CSADQ9Y600 493 aa22.27■■□□□ 1.16
YIPF3-208ENST00000490447 CRHR2Q13324 411 aa22.26■■□□□ 1.15
YIPF3-208ENST00000490447 ALDH1L2Q3SY69 923 aa22.26■■□□□ 1.15
YIPF3-208ENST00000490447 CDAN1Q8IWY9 1227 aa22.26■■□□□ 1.15
YIPF3-208ENST00000490447 KIF16BQ96L93 1317 aa22.25■■□□□ 1.15
YIPF3-208ENST00000490447 SLFN5Q08AF3 891 aa22.25■■□□□ 1.15
YIPF3-208ENST00000490447 OTOP1Q7RTM1 612 aa22.25■■□□□ 1.15
YIPF3-208ENST00000490447 SMC4Q9NTJ3 1288 aa22.25■■□□□ 1.15
YIPF3-208ENST00000490447 SUGT1Q9Y2Z0 365 aa22.25■■□□□ 1.15
YIPF3-208ENST00000490447 TESPA1A2RU30 521 aaPredicted RBP22.24■■□□□ 1.15
YIPF3-208ENST00000490447 SLC5A1P13866 664 aa22.24■■□□□ 1.15
YIPF3-208ENST00000490447 MAP3K9P80192 1104 aa22.24■■□□□ 1.15
YIPF3-208ENST00000490447 VGLL4Q14135 290 aa22.24■■□□□ 1.15
YIPF3-208ENST00000490447 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.24■■□□□ 1.15
YIPF3-208ENST00000490447 HOOK2Q96ED9 719 aa22.24■■□□□ 1.15
YIPF3-208ENST00000490447 LAMB1P07942 1786 aa22.24■■□□□ 1.15
YIPF3-208ENST00000490447 GTF2A2P52657 109 aa22.23■■□□□ 1.15
YIPF3-208ENST00000490447 CACNB3P54284 484 aa22.23■■□□□ 1.15
YIPF3-208ENST00000490447 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.23■■□□□ 1.15
YIPF3-208ENST00000490447 CD99L2Q8TCZ2 262 aa22.23■■□□□ 1.15
YIPF3-208ENST00000490447 ZDHHC15Q96MV8 337 aa22.23■■□□□ 1.15
YIPF3-208ENST00000490447 PTPN18Q99952 460 aa22.23■■□□□ 1.15
YIPF3-208ENST00000490447 MRIQ9BWK5 157 aa22.23■■□□□ 1.15
YIPF3-208ENST00000490447 HTTP42858 3142 aa22.23■■□□□ 1.15
YIPF3-208ENST00000490447 OTOFQ9HC10 1997 aa22.22■■□□□ 1.15
YIPF3-208ENST00000490447 EYA2O00167 538 aa22.22■■□□□ 1.15
YIPF3-208ENST00000490447 FGFR2P21802 821 aa22.22■■□□□ 1.15
YIPF3-208ENST00000490447 SP3Q02447 781 aa22.22■■□□□ 1.15
YIPF3-208ENST00000490447 LPIN2Q92539 896 aa22.22■■□□□ 1.15
YIPF3-208ENST00000490447 OTUD5Q96G74 571 aa22.22■■□□□ 1.15
YIPF3-208ENST00000490447 PDE4DIPQ5VU43 2346 aa22.21■■□□□ 1.15
YIPF3-208ENST00000490447 CCL15-CCL14A0A0B4J2E2 113 aa22.21■■□□□ 1.15
YIPF3-208ENST00000490447 CCL15Q16663 113 aa22.21■■□□□ 1.15
YIPF3-208ENST00000490447 PRPF38BQ5VTL8 546 aaKnown RBP22.21■■□□□ 1.15
YIPF3-208ENST00000490447 INTS3Q68E01 1043 aaKnown RBP22.21■■□□□ 1.15
YIPF3-208ENST00000490447 FAM83AQ86UY5 434 aa22.21■■□□□ 1.15
YIPF3-208ENST00000490447 WDR66Q8TBY9 1149 aa22.21■■□□□ 1.15
YIPF3-208ENST00000490447 CNKSR2Q8WXI2 1034 aa22.21■■□□□ 1.15
YIPF3-208ENST00000490447 MS4A4AQ96JQ5 239 aa22.21■■□□□ 1.15
YIPF3-208ENST00000490447 EFCC1Q9HA90 598 aa22.21■■□□□ 1.15
YIPF3-208ENST00000490447 WDHD1O75717 1129 aaPredicted RBP22.2■■□□□ 1.14
YIPF3-208ENST00000490447 UBTFL1P0CB47 393 aaPredicted RBP22.2■■□□□ 1.14
YIPF3-208ENST00000490447 WRNIP1Q96S55 665 aa22.2■■□□□ 1.14
YIPF3-208ENST00000490447 ZFYVE28Q9HCC9 887 aa22.2■■□□□ 1.14
YIPF3-208ENST00000490447 PTPN22Q9Y2R2 807 aa22.2■■□□□ 1.14
YIPF3-208ENST00000490447 CENPFP49454 3210 aa22.19■■□□□ 1.14
YIPF3-208ENST00000490447 ARHGEF6Q15052 776 aa22.19■■□□□ 1.14
YIPF3-208ENST00000490447 TAF1CQ15572 869 aaPredicted RBP22.19■■□□□ 1.14
YIPF3-208ENST00000490447 FKBP1CQ5VVH2 108 aa22.19■■□□□ 1.14
YIPF3-208ENST00000490447 APOBEC3HQ6NTF7 200 aaKnown RBP22.19■■□□□ 1.14
YIPF3-208ENST00000490447 HHIPL2Q6UWX4 724 aa22.19■■□□□ 1.14
YIPF3-208ENST00000490447 BRI3BPQ8WY22 251 aa22.19■■□□□ 1.14
YIPF3-208ENST00000490447 RFX5P48382 616 aaPredicted RBP22.18■■□□□ 1.14
YIPF3-208ENST00000490447 DCAF15Q66K64 600 aa22.18■■□□□ 1.14
YIPF3-208ENST00000490447 CDCA7LQ96GN5 454 aa22.18■■□□□ 1.14
YIPF3-208ENST00000490447 SIL1Q9H173 461 aa22.18■■□□□ 1.14
YIPF3-208ENST00000490447 SPDYE5A6NIY4 337 aa22.17■■□□□ 1.14
YIPF3-208ENST00000490447 CT47B1P0C2W7 299 aaPredicted RBP22.17■■□□□ 1.14
YIPF3-208ENST00000490447 GNL3LQ9NVN8 582 aaKnown RBP22.17■■□□□ 1.14
YIPF3-208ENST00000490447 FBXO3Q9UK99 471 aa22.17■■□□□ 1.14
YIPF3-208ENST00000490447 HDAC5Q9UQL6 1122 aa22.17■■□□□ 1.14
YIPF3-208ENST00000490447 RPAP1Q9BWH6 1393 aaPredicted RBP22.16■■□□□ 1.14
YIPF3-208ENST00000490447 ATP2B3Q16720 1220 aa22.16■■□□□ 1.14
YIPF3-208ENST00000490447 ERO1BQ86YB8 467 aa22.16■■□□□ 1.14
YIPF3-208ENST00000490447 CEP126Q9P2H0 1117 aa22.16■■□□□ 1.14
YIPF3-208ENST00000490447 SNCAIPQ9Y6H5 919 aa22.16■■□□□ 1.14
YIPF3-208ENST00000490447 CIAO1O76071 339 aa22.15■■□□□ 1.14
YIPF3-208ENST00000490447 CETPP11597 493 aa22.15■■□□□ 1.14
YIPF3-208ENST00000490447 ATG9AQ7Z3C6 839 aa22.15■■□□□ 1.14
YIPF3-208ENST00000490447 FAM43AQ8N2R8 423 aa22.15■■□□□ 1.14
YIPF3-208ENST00000490447 ZKSCAN4Q969J2 545 aaPredicted RBP22.15■■□□□ 1.14
YIPF3-208ENST00000490447 API5Q9BZZ5 524 aaKnown RBP22.15■■□□□ 1.14
YIPF3-208ENST00000490447 NOB1Q9ULX3 412 aaKnown RBP22.15■■□□□ 1.14
YIPF3-208ENST00000490447 SNAPC2Q13487 334 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms