RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 C8orf34Q49A92 452 aa6.95□□□□□ -1.3
RBM39-235ENST00000490354 TMEM102Q8N9M5 508 aaPredicted RBP6.95□□□□□ -1.3
RBM39-235ENST00000490354 PIM2Q9P1W9 311 aa6.95□□□□□ -1.3
RBM39-235ENST00000490354 ADGRE2Q9UHX3 823 aa6.95□□□□□ -1.3
RBM39-235ENST00000490354 EFCAB5A4FU69 1503 aa6.95□□□□□ -1.3
RBM39-235ENST00000490354 UGGT2Q9NYU1 1516 aa6.95□□□□□ -1.3
RBM39-235ENST00000490354 FHOD3Q2V2M9 1422 aa6.94□□□□□ -1.3
RBM39-235ENST00000490354 FMN1Q68DA7 1419 aa6.94□□□□□ -1.3
RBM39-235ENST00000490354 PBRM1Q86U86 1689 aa6.94□□□□□ -1.3
RBM39-235ENST00000490354 SOX1O00570 391 aaPredicted RBP6.94□□□□□ -1.3
RBM39-235ENST00000490354 PDGFAP04085 211 aa6.94□□□□□ -1.3
RBM39-235ENST00000490354 CARMIL2Q6F5E8 1435 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 F13BP05160 661 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 PCSK2P16519 638 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 RXRBP28702 533 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 NOM1Q5C9Z4 860 aaKnown RBP6.93□□□□□ -1.3
RBM39-235ENST00000490354 NUTM2GQ5VZR2 741 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 VN1R5Q7Z5H4 357 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 SHISA5Q8N114 240 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 FBXL6Q8N531 539 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 C12orf50Q8NA57 414 aaPredicted RBP6.93□□□□□ -1.3
RBM39-235ENST00000490354 HELQQ8TDG4 1101 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 NXPE3Q969Y0 559 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 ZKSCAN3Q9BRR0 538 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 USP26Q9BXU7 913 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 TMPRSS13Q9BYE2 586 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 IQGAP2Q13576 1575 aa6.93□□□□□ -1.3
RBM39-235ENST00000490354 DISP1Q96F81 1524 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 CEP170Q5SW79 1584 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 EREGO14944 169 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 IKBKEQ14164 716 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 ABI1Q8IZP0 508 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 TTC16Q8NEE8 873 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 BSNDQ8WZ55 320 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 PMEPA1Q969W9 287 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 OSMRQ99650 979 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 ATG3Q9NT62 314 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 LEMD3Q9Y2U8 911 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 CASKIN1Q8WXD9 1431 aa6.92□□□□□ -1.3
RBM39-235ENST00000490354 LOC100289279A0A1B0GTE1 492 aa6.91□□□□□ -1.3
RBM39-235ENST00000490354 TIAF1O95411 115 aa6.91□□□□□ -1.3
RBM39-235ENST00000490354 DLGAP3O95886 979 aa6.91□□□□□ -1.3
RBM39-235ENST00000490354 MPSTP25325 297 aa6.91□□□□□ -1.3
RBM39-235ENST00000490354 MZF1P28698 734 aaPredicted RBP6.91□□□□□ -1.3
RBM39-235ENST00000490354 EIF1AXP47813 144 aaKnown RBP6.91□□□□□ -1.3
RBM39-235ENST00000490354 MSMPQ1L6U9 139 aa6.91□□□□□ -1.3
RBM39-235ENST00000490354 SMG8Q8ND04 991 aaKnown RBP6.91□□□□□ -1.3
RBM39-235ENST00000490354 GIMAP7Q8NHV1 300 aa6.91□□□□□ -1.3
RBM39-235ENST00000490354 PBXIP1Q96AQ6 731 aa6.91□□□□□ -1.3
RBM39-235ENST00000490354 OSBPL1AQ9BXW6 950 aa6.91□□□□□ -1.3
RBM39-235ENST00000490354 SUGCTQ9HAC7 445 aa6.91□□□□□ -1.3
RBM39-235ENST00000490354 CYP4F12Q9HCS2 524 aa6.91□□□□□ -1.3
RBM39-235ENST00000490354 PRG4Q92954 1404 aaPredicted RBP6.91□□□□□ -1.3
RBM39-235ENST00000490354 DRD2P14416 443 aa6.9□□□□□ -1.3
RBM39-235ENST00000490354 NFKBIBQ15653 356 aa6.9□□□□□ -1.3
RBM39-235ENST00000490354 ASAP3Q8TDY4 903 aa6.9□□□□□ -1.3
RBM39-235ENST00000490354 POLIQ9UNA4 740 aa6.9□□□□□ -1.3
RBM39-235ENST00000490354 ANGEL1Q9UNK9 670 aaKnown RBP6.9□□□□□ -1.3
RBM39-235ENST00000490354 FAM95CA0A1B0GW59 222 aa6.89□□□□□ -1.31
RBM39-235ENST00000490354 FOSL1P15407 271 aa6.89□□□□□ -1.31
RBM39-235ENST00000490354 TRIM26Q12899 539 aaPredicted RBP6.89□□□□□ -1.31
RBM39-235ENST00000490354 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
RBM39-235ENST00000490354 FBLIM1Q8WUP2 373 aa6.89□□□□□ -1.31
RBM39-235ENST00000490354 CCDC39Q9UFE4 941 aa6.89□□□□□ -1.31
RBM39-235ENST00000490354 PTPRGP23470 1445 aa6.89□□□□□ -1.31
RBM39-235ENST00000490354 SAMD9Q5K651 1589 aa6.89□□□□□ -1.31
RBM39-235ENST00000490354 PHACTR2O75167 634 aa6.88□□□□□ -1.31
RBM39-235ENST00000490354 USP11P51784 963 aa6.88□□□□□ -1.31
RBM39-235ENST00000490354 EXOSC6Q5RKV6 272 aaKnown RBP6.88□□□□□ -1.31
RBM39-235ENST00000490354 NFXL1Q6ZNB6 911 aa6.88□□□□□ -1.31
RBM39-235ENST00000490354 SOX17Q9H6I2 414 aaPredicted RBP6.88□□□□□ -1.31
RBM39-235ENST00000490354 FOXD3Q9UJU5 478 aaPredicted RBP6.88□□□□□ -1.31
RBM39-235ENST00000490354 MAP3K1Q13233 1512 aa6.87□□□□□ -1.31
RBM39-235ENST00000490354 FYCO1Q9BQS8 1478 aa6.87□□□□□ -1.31
RBM39-235ENST00000490354 TNFRSF21O75509 655 aa6.87□□□□□ -1.31
RBM39-235ENST00000490354 ESRRAP11474 423 aaPredicted RBP6.87□□□□□ -1.31
RBM39-235ENST00000490354 EDN3P14138 238 aa6.87□□□□□ -1.31
RBM39-235ENST00000490354 ADMP35318 185 aa6.87□□□□□ -1.31
RBM39-235ENST00000490354 MTMR3Q13615 1198 aa6.87□□□□□ -1.31
RBM39-235ENST00000490354 CPSF6Q16630 551 aaKnown RBP eCLIP6.87□□□□□ -1.31
RBM39-235ENST00000490354 PAOXQ6QHF9 649 aa6.87□□□□□ -1.31
RBM39-235ENST00000490354 C2CD4AQ8NCU7 369 aaPredicted RBP6.87□□□□□ -1.31
RBM39-235ENST00000490354 GTF3C2Q8WUA4 911 aaPredicted RBP6.87□□□□□ -1.31
RBM39-235ENST00000490354 BHLHE41Q9C0J9 482 aaPredicted RBP6.87□□□□□ -1.31
RBM39-235ENST00000490354 LATS2Q9NRM7 1088 aa6.87□□□□□ -1.31
RBM39-235ENST00000490354 CLASP1Q7Z460 1538 aa6.86□□□□□ -1.31
RBM39-235ENST00000490354 TTBK1Q5TCY1 1321 aaPredicted RBP6.86□□□□□ -1.31
RBM39-235ENST00000490354 PRNPP04156 253 aa6.86□□□□□ -1.31
RBM39-235ENST00000490354 GSTM4Q03013 218 aa6.86□□□□□ -1.31
RBM39-235ENST00000490354 PEAR1Q5VY43 1037 aaPredicted RBP6.86□□□□□ -1.31
RBM39-235ENST00000490354 ALKBH2Q6NS38 261 aa6.86□□□□□ -1.31
RBM39-235ENST00000490354 SNX29Q8TEQ0 813 aa6.86□□□□□ -1.31
RBM39-235ENST00000490354 TBC1D32Q96NH3 1257 aa6.86□□□□□ -1.31
RBM39-235ENST00000490354 METTL12A8MUP2 240 aa6.85□□□□□ -1.31
RBM39-235ENST00000490354 SOX4Q06945 474 aaPredicted RBP6.85□□□□□ -1.31
RBM39-235ENST00000490354 FZD5Q13467 585 aa6.85□□□□□ -1.31
RBM39-235ENST00000490354 AAMPQ13685 434 aa6.85□□□□□ -1.31
RBM39-235ENST00000490354 CBLL1Q75N03 491 aa6.85□□□□□ -1.31
RBM39-235ENST00000490354 ZAR1Q86SH2 424 aa6.85□□□□□ -1.31
RBM39-235ENST00000490354 VSIG10LQ86VR7 867 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms