RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 PERM1Q5SV97 790 aa4.88□□□□□ -1.63
CRNKL1-203ENST00000490258 ADAMTSL4Q6UY14 1074 aa4.88□□□□□ -1.63
CRNKL1-203ENST00000490258 DHX32Q7L7V1 743 aaKnown RBP4.88□□□□□ -1.63
CRNKL1-203ENST00000490258 MTUS2Q5JR59 1369 aa4.88□□□□□ -1.63
CRNKL1-203ENST00000490258 RRBP1Q9P2E9 1410 aaKnown RBP4.88□□□□□ -1.63
CRNKL1-203ENST00000490258 SASH3O75995 380 aa4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 COL13A1Q5TAT6 717 aaPredicted RBP4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 KSR1Q8IVT5 923 aa4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 RGL4Q8IZJ4 473 aa4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 HELQQ8TDG4 1101 aa4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 TTC9Q92623 222 aa4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 MYO5BQ9ULV0 1848 aa4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 ZNF644Q9H582 1327 aaPredicted RBP4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 TROQ12816 1431 aaPredicted RBP4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 ASXL2Q76L83 1435 aa4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 ARHGEF12Q9NZN5 1544 aa4.87□□□□□ -1.63
CRNKL1-203ENST00000490258 MROH2AA6NES4 1674 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 KIDINS220Q9ULH0 1771 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 MMP20O60882 483 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 XYLBO75191 536 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 PAPLNO95428 1278 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 PRNPP04156 253 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 EPB42P16452 691 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 BRD2P25440 801 aaKnown RBP4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 SOX18P35713 384 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 NRLP54845 237 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 PCSK7Q16549 785 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 UVSSAQ2YD98 709 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 NFXL1Q6ZNB6 911 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 NPM2Q86SE8 214 aaKnown RBP4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 DCAF11Q8TEB1 546 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 UTP4Q969X6 686 aaKnown RBP4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 TLR7Q9NYK1 1049 aaKnown RBP4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 PIM2Q9P1W9 311 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 STIM2Q9P246 746 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 FGD6Q6ZV73 1430 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 WDR7Q9Y4E6 1490 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 KDM5BQ9UGL1 1544 aa4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 INO80Q9ULG1 1556 aaPredicted RBP4.86□□□□□ -1.63
CRNKL1-203ENST00000490258 ZAP70P43403 619 aa4.85□□□□□ -1.63
CRNKL1-203ENST00000490258 MSMPQ1L6U9 139 aa4.85□□□□□ -1.63
CRNKL1-203ENST00000490258 ELMSAN1Q6PJG2 1045 aa4.85□□□□□ -1.63
CRNKL1-203ENST00000490258 KRT25Q7Z3Z0 450 aa4.85□□□□□ -1.63
CRNKL1-203ENST00000490258 VSIG10LQ86VR7 867 aa4.85□□□□□ -1.63
CRNKL1-203ENST00000490258 ATCAYQ86WG3 371 aa4.85□□□□□ -1.63
CRNKL1-203ENST00000490258 VTI1AQ96AJ9 217 aa4.85□□□□□ -1.63
CRNKL1-203ENST00000490258 CEP41Q9BYV8 373 aa4.85□□□□□ -1.63
CRNKL1-203ENST00000490258 MYOM3Q5VTT5 1437 aa4.85□□□□□ -1.63
CRNKL1-203ENST00000490258 MAP3K1Q13233 1512 aa4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 ZFYVE16Q7Z3T8 1539 aa4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 GPATCH8Q9UKJ3 1502 aaKnown RBP4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 WDR64B1ANS9 1081 aa4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 RARAP10276 462 aa4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 MLLT1Q03111 559 aaPredicted RBP4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 FAM50AQ14320 339 aaKnown RBP4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 CYB5RLQ6IPT4 315 aa4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 CLEC10AQ8IUN9 316 aa4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 OR13H1Q8NG92 308 aa4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 PNMA5Q96PV4 448 aa4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 SRA1Q9HD15 236 aaKnown RBP4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.84□□□□□ -1.63
CRNKL1-203ENST00000490258 UHRF1BP1LA0JNW5 1464 aa4.83□□□□□ -1.64
CRNKL1-203ENST00000490258 KIF4AO95239 1232 aa4.83□□□□□ -1.64
CRNKL1-203ENST00000490258 MTMR3Q13615 1198 aa4.83□□□□□ -1.64
CRNKL1-203ENST00000490258 NLRP13Q86W25 1043 aa4.83□□□□□ -1.64
CRNKL1-203ENST00000490258 GTF3C2Q8WUA4 911 aaPredicted RBP4.83□□□□□ -1.64
CRNKL1-203ENST00000490258 MYRFLQ96LU7 910 aa4.83□□□□□ -1.64
CRNKL1-203ENST00000490258 SLC38A3Q99624 504 aa4.83□□□□□ -1.64
CRNKL1-203ENST00000490258 FAM83CQ9BQN1 747 aa4.83□□□□□ -1.64
CRNKL1-203ENST00000490258 CHRDQ9H2X0 955 aa4.83□□□□□ -1.64
CRNKL1-203ENST00000490258 TMEM63CQ9P1W3 806 aa4.83□□□□□ -1.64
CRNKL1-203ENST00000490258 MROH1Q8NDA8 1641 aa4.83□□□□□ -1.64
CRNKL1-203ENST00000490258 HECW2Q9P2P5 1572 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 DIP2CQ9Y2E4 1556 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 MAPKBP1O60336 1514 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 TCOF1Q13428 1488 aaKnown RBP4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 FZD6O60353 706 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 IGHA2P01877 340 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 MPSTP25325 297 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 XKR5Q6UX68 686 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 MAP4K3Q8IVH8 894 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 CMTR1Q8N1G2 835 aaKnown RBP4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 AGBL5Q8NDL9 886 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 GPR152Q8TDT2 470 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 FAM46AQ96IP4 442 aaKnown RBP4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 CSRNP1Q96S65 589 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 GGNBP2Q9H3C7 697 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 USTQ9Y2C2 406 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 CFAP74Q9C0B2 1584 aa4.82□□□□□ -1.64
CRNKL1-203ENST00000490258 DAPK1P53355 1430 aa4.81□□□□□ -1.64
CRNKL1-203ENST00000490258 TRAPPC8Q9Y2L5 1435 aa4.81□□□□□ -1.64
CRNKL1-203ENST00000490258 CCNB3Q8WWL7 1395 aa4.81□□□□□ -1.64
CRNKL1-203ENST00000490258 FANCIQ9NVI1 1328 aa4.81□□□□□ -1.64
CRNKL1-203ENST00000490258 E9PCH4 1651 aa4.81□□□□□ -1.64
CRNKL1-203ENST00000490258 CLTCQ00610 1675 aaKnown RBP4.81□□□□□ -1.64
CRNKL1-203ENST00000490258 J3QW42 95 aa4.81□□□□□ -1.64
CRNKL1-203ENST00000490258 PDGFAP04085 211 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms