RNA–Protein interactions for RNA: ENST00000490132.1

COL9A2-209, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-209ENST00000490132 TDRD3Q9H7E2 651 aaKnown RBP22.83■■□□□ 1.25
COL9A2-209ENST00000490132 CEP126Q9P2H0 1117 aa22.83■■□□□ 1.25
COL9A2-209ENST00000490132 IL15P40933 162 aaPredicted RBP22.82■■□□□ 1.24
COL9A2-209ENST00000490132 ARMC9Q7Z3E5 817 aa22.82■■□□□ 1.24
COL9A2-209ENST00000490132 ZNF70Q9UC06 446 aaPredicted RBP22.82■■□□□ 1.24
COL9A2-209ENST00000490132 ANGEL1Q9UNK9 670 aaKnown RBP22.82■■□□□ 1.24
COL9A2-209ENST00000490132 MTX1Q13505 466 aa22.81■■□□□ 1.24
COL9A2-209ENST00000490132 LDLRAD1Q5T700 205 aa22.81■■□□□ 1.24
COL9A2-209ENST00000490132 TMEM57Q8N5G2 664 aa22.81■■□□□ 1.24
COL9A2-209ENST00000490132 RNF186Q9NXI6 227 aa22.81■■□□□ 1.24
COL9A2-209ENST00000490132 SAGE1Q9NXZ1 904 aa22.81■■□□□ 1.24
COL9A2-209ENST00000490132 OTOFQ9HC10 1997 aa22.81■■□□□ 1.24
COL9A2-209ENST00000490132 ZBED9Q6R2W3 1325 aa22.81■■□□□ 1.24
COL9A2-209ENST00000490132 SRGAP3O43295 1099 aa22.8■■□□□ 1.24
COL9A2-209ENST00000490132 RASA3Q14644 834 aa22.8■■□□□ 1.24
COL9A2-209ENST00000490132 NBPF12Q5TAG4 269 aaPredicted RBP22.8■■□□□ 1.24
COL9A2-209ENST00000490132 ZKSCAN2Q63HK3 967 aa22.8■■□□□ 1.24
COL9A2-209ENST00000490132 TRPA1O75762 1119 aa22.79■■□□□ 1.24
COL9A2-209ENST00000490132 HDLBPQ00341 1268 aaKnown RBP22.79■■□□□ 1.24
COL9A2-209ENST00000490132 MAP3K11Q16584 847 aa22.79■■□□□ 1.24
COL9A2-209ENST00000490132 CDAN1Q8IWY9 1227 aa22.79■■□□□ 1.24
COL9A2-209ENST00000490132 ADORA1P30542 326 aa22.78■■□□□ 1.24
COL9A2-209ENST00000490132 MKRN3Q13064 507 aaKnown RBP22.78■■□□□ 1.24
COL9A2-209ENST00000490132 TEKT1Q969V4 418 aa22.78■■□□□ 1.24
COL9A2-209ENST00000490132 LAMB1P07942 1786 aa22.77■■□□□ 1.24
COL9A2-209ENST00000490132 GNAI2P04899 355 aa22.77■■□□□ 1.24
COL9A2-209ENST00000490132 PHKA1P46020 1223 aa22.77■■□□□ 1.24
COL9A2-209ENST00000490132 TNFAIP1Q13829 316 aa22.77■■□□□ 1.24
COL9A2-209ENST00000490132 SUPT20HL1Q3ZLR7 823 aa22.77■■□□□ 1.24
COL9A2-209ENST00000490132 REM2Q8IYK8 340 aaPredicted RBP22.77■■□□□ 1.24
COL9A2-209ENST00000490132 TEPSINQ96N21 525 aa22.77■■□□□ 1.24
COL9A2-209ENST00000490132 SUGT1Q9Y2Z0 365 aa22.77■■□□□ 1.24
COL9A2-209ENST00000490132 TCP10L2B9ZVM9 353 aa22.76■■□□□ 1.23
COL9A2-209ENST00000490132 WDR66Q8TBY9 1149 aa22.76■■□□□ 1.23
COL9A2-209ENST00000490132 CLMNQ96JQ2 1002 aa22.76■■□□□ 1.23
COL9A2-209ENST00000490132 ZDHHC15Q96MV8 337 aa22.76■■□□□ 1.23
COL9A2-209ENST00000490132 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.76■■□□□ 1.23
COL9A2-209ENST00000490132 MAST3O60307 1309 aa22.76■■□□□ 1.23
COL9A2-209ENST00000490132 PNMA6EA0A0J9YXQ4 647 aa22.75■■□□□ 1.23
COL9A2-209ENST00000490132 PPP1R12BO60237 982 aaPredicted RBP22.75■■□□□ 1.23
COL9A2-209ENST00000490132 CACNB3P54284 484 aa22.75■■□□□ 1.23
COL9A2-209ENST00000490132 APOBEC3HQ6NTF7 200 aaKnown RBP22.75■■□□□ 1.23
COL9A2-209ENST00000490132 MRIQ9BWK5 157 aa22.75■■□□□ 1.23
COL9A2-209ENST00000490132 TMEM39BQ9GZU3 492 aa22.75■■□□□ 1.23
COL9A2-209ENST00000490132 USP2O75604 605 aaPredicted RBP22.74■■□□□ 1.23
COL9A2-209ENST00000490132 RLBP1P12271 317 aa22.74■■□□□ 1.23
COL9A2-209ENST00000490132 TFCP2Q12800 502 aa22.74■■□□□ 1.23
COL9A2-209ENST00000490132 SPRYD7Q5W111 196 aa22.74■■□□□ 1.23
COL9A2-209ENST00000490132 ABHD8Q96I13 439 aa22.74■■□□□ 1.23
COL9A2-209ENST00000490132 PRDX5P30044 214 aa22.73■■□□□ 1.23
COL9A2-209ENST00000490132 TIMM10P62072 90 aa22.73■■□□□ 1.23
COL9A2-209ENST00000490132 CCDC102BQ68D86 513 aa22.73■■□□□ 1.23
COL9A2-209ENST00000490132 HHIPL2Q6UWX4 724 aa22.73■■□□□ 1.23
COL9A2-209ENST00000490132 GNL3LQ9NVN8 582 aaKnown RBP22.73■■□□□ 1.23
COL9A2-209ENST00000490132 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.73■■□□□ 1.23
COL9A2-209ENST00000490132 A0A1B0GUL7 405 aa22.72■■□□□ 1.23
COL9A2-209ENST00000490132 TM4SF4P48230 202 aa22.72■■□□□ 1.23
COL9A2-209ENST00000490132 MYH2Q9UKX2 1941 aa22.72■■□□□ 1.23
COL9A2-209ENST00000490132 SEMA3EO15041 775 aa22.71■■□□□ 1.23
COL9A2-209ENST00000490132 ZBTB22O15209 634 aa22.71■■□□□ 1.23
COL9A2-209ENST00000490132 IREB2P48200 963 aaKnown RBP22.71■■□□□ 1.23
COL9A2-209ENST00000490132 TNNI2P48788 182 aa22.71■■□□□ 1.23
COL9A2-209ENST00000490132 DIXDC1Q155Q3 683 aa22.71■■□□□ 1.23
COL9A2-209ENST00000490132 FTSJ3Q8IY81 847 aaKnown RBP22.71■■□□□ 1.23
COL9A2-209ENST00000490132 SLC10A4Q96EP9 437 aa22.71■■□□□ 1.23
COL9A2-209ENST00000490132 WNK4Q96J92 1243 aa22.71■■□□□ 1.23
COL9A2-209ENST00000490132 MCOLN1Q9GZU1 580 aa22.71■■□□□ 1.23
COL9A2-209ENST00000490132 DENND2AQ9ULE3 1009 aa22.71■■□□□ 1.23
COL9A2-209ENST00000490132 SALL1Q9NSC2 1324 aa22.71■■□□□ 1.23
COL9A2-209ENST00000490132 RASGRF1Q13972 1273 aa22.7■■□□□ 1.22
COL9A2-209ENST00000490132 XAGE2Q96GT9 111 aa22.7■■□□□ 1.22
COL9A2-209ENST00000490132 C1orf115Q9H7X2 142 aa22.7■■□□□ 1.22
COL9A2-209ENST00000490132 DAGLAQ9Y4D2 1042 aa22.7■■□□□ 1.22
COL9A2-209ENST00000490132 UNCXA6NJT0 531 aa22.69■■□□□ 1.22
COL9A2-209ENST00000490132 GJA5P36382 358 aa22.69■■□□□ 1.22
COL9A2-209ENST00000490132 SREBF2Q12772 1141 aa22.69■■□□□ 1.22
COL9A2-209ENST00000490132 TMOD2Q9NZR1 351 aa22.69■■□□□ 1.22
COL9A2-209ENST00000490132 AKAP2Q9Y2D5 859 aa22.69■■□□□ 1.22
COL9A2-209ENST00000490132 TBC1D8O95759 1140 aa22.68■■□□□ 1.22
COL9A2-209ENST00000490132 LDHBP07195 334 aaKnown RBP22.68■■□□□ 1.22
COL9A2-209ENST00000490132 POLA2Q14181 598 aa22.68■■□□□ 1.22
COL9A2-209ENST00000490132 FKBP1CQ5VVH2 108 aa22.68■■□□□ 1.22
COL9A2-209ENST00000490132 ITPRIPQ8IWB1 547 aa22.68■■□□□ 1.22
COL9A2-209ENST00000490132 ANKRD13AQ8IZ07 590 aa22.68■■□□□ 1.22
COL9A2-209ENST00000490132 ZBTB48P10074 688 aaPredicted RBP22.67■■□□□ 1.22
COL9A2-209ENST00000490132 DGKZQ13574 1117 aa22.67■■□□□ 1.22
COL9A2-209ENST00000490132 FAM83AQ86UY5 434 aa22.67■■□□□ 1.22
COL9A2-209ENST00000490132 AK9Q5TCS8 1911 aa22.67■■□□□ 1.22
COL9A2-209ENST00000490132 RPAP1Q9BWH6 1393 aaPredicted RBP22.66■■□□□ 1.22
COL9A2-209ENST00000490132 PDS5AQ29RF7 1337 aaKnown RBP22.66■■□□□ 1.22
COL9A2-209ENST00000490132 MANSC4A6NHS7 340 aaPredicted RBP22.66■■□□□ 1.22
COL9A2-209ENST00000490132 ZBTB7BO15156 539 aaPredicted RBP22.66■■□□□ 1.22
COL9A2-209ENST00000490132 G3BP1Q13283 466 aaKnown RBP eCLIP22.66■■□□□ 1.22
COL9A2-209ENST00000490132 MVPQ14764 893 aaKnown RBP22.66■■□□□ 1.22
COL9A2-209ENST00000490132 CDC42EP5Q6NZY7 148 aa22.66■■□□□ 1.22
COL9A2-209ENST00000490132 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.66■■□□□ 1.22
COL9A2-209ENST00000490132 SSH3Q8TE77 659 aa22.66■■□□□ 1.22
COL9A2-209ENST00000490132 ELP3Q9H9T3 547 aa22.66■■□□□ 1.22
COL9A2-209ENST00000490132 ATP8B2P98198 1209 aa22.65■■□□□ 1.22
COL9A2-209ENST00000490132 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms