RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ADAMTS12P58397 1594 aa9.96□□□□□ -0.82
LSAMP-205ENST00000490035 C20orf194Q5TEA3 1177 aa9.96□□□□□ -0.82
LSAMP-205ENST00000490035 GTF2F1P35269 517 aaKnown RBP eCLIP9.96□□□□□ -0.82
LSAMP-205ENST00000490035 SMTNP53814 917 aa9.96□□□□□ -0.82
LSAMP-205ENST00000490035 CCDC184Q52MB2 194 aa9.96□□□□□ -0.82
LSAMP-205ENST00000490035 HEATR3Q7Z4Q2 680 aa9.96□□□□□ -0.82
LSAMP-205ENST00000490035 NGLY1Q96IV0 654 aa9.96□□□□□ -0.82
LSAMP-205ENST00000490035 GIGYF1O75420 1035 aaPredicted RBP9.95□□□□□ -0.82
LSAMP-205ENST00000490035 FOXO3O43524 673 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 MYL5Q02045 173 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 SEL1L2Q5TEA6 688 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 MAIP1Q8WWC4 291 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 PLCB1Q9NQ66 1216 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 DACT1Q9NYF0 836 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 DNAI1Q9UI46 699 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 EXOC7Q9UPT5 735 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 AKR1B15C9JRZ8 316 aaPredicted RBP9.95□□□□□ -0.82
LSAMP-205ENST00000490035 GIMAP6Q6P9H5 292 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 TTC6Q86TZ1 520 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 MAK16Q9BXY0 300 aaKnown RBP9.95□□□□□ -0.82
LSAMP-205ENST00000490035 PNMA2Q9UL42 364 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 CALUO43852 315 aaPredicted RBP9.95□□□□□ -0.82
LSAMP-205ENST00000490035 TAOK1Q7L7X3 1001 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 UBL4BQ8N7F7 174 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 SETD1BQ9UPS6 1966 aaKnown RBP9.95□□□□□ -0.82
LSAMP-205ENST00000490035 UBXN1Q04323 297 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 MAP7Q14244 749 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 CHPF2Q9P2E5 772 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 DEXIO95424 95 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 GNA14O95837 355 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 PARP10Q53GL7 1025 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 SV2BQ7L1I2 683 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 PCDH11XQ9BZA7 1347 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 PCDH11YQ9BZA8 1340 aa9.95□□□□□ -0.82
LSAMP-205ENST00000490035 IBTKQ9P2D0 1353 aaPredicted RBP9.94□□□□□ -0.82
LSAMP-205ENST00000490035 EDC4Q6P2E9 1401 aaKnown RBP9.94□□□□□ -0.82
LSAMP-205ENST00000490035 SHROOM2Q13796 1616 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 SLC9C2Q5TAH2 1124 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 SYCE1Q8N0S2 351 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 ZBTB3Q9H5J0 574 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 ATP6V0A2Q9Y487 856 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 CYP26C1Q6V0L0 522 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 RUFY4Q6ZNE9 571 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 ARHGAP24Q8N264 748 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 MPNDQ8N594 471 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 FAM76AQ8TAV0 307 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 OGFRQ9NZT2 677 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 PARP2Q9UGN5 583 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 SSH2Q76I76 1423 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 LACTBP83111 547 aaPredicted RBP9.94□□□□□ -0.82
LSAMP-205ENST00000490035 MXRA7P84157 204 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 BCAP29Q9UHQ4 241 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 CREB3L3Q68CJ9 461 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 MAPKBP1O60336 1514 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 AOPEPQ8N6M6 819 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 ERO1AQ96HE7 468 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 DNAJC21Q5F1R6 531 aaKnown RBP9.94□□□□□ -0.82
LSAMP-205ENST00000490035 MLKLQ8NB16 471 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 FAM114A2Q9NRY5 505 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 STK10O94804 968 aaKnown RBP9.94□□□□□ -0.82
LSAMP-205ENST00000490035 FAM160A1Q05DH4 1040 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 CPLX4Q7Z7G2 160 aa9.94□□□□□ -0.82
LSAMP-205ENST00000490035 UTP11Q9Y3A2 253 aaKnown RBP9.94□□□□□ -0.82
LSAMP-205ENST00000490035 COL17A1Q9UMD9 1497 aaPredicted RBP9.94□□□□□ -0.82
LSAMP-205ENST00000490035 YTHDC2Q9H6S0 1430 aaKnown RBP9.93□□□□□ -0.82
LSAMP-205ENST00000490035 VAT1LQ9HCJ6 419 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 POTEDQ86YR6 584 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 IFT20Q8IY31 132 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 MMRN2Q9H8L6 949 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 GPTP24298 496 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 WDR44Q5JSH3 913 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 STX10O60499 249 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 AFMP43652 599 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 MRPS9P82933 396 aaKnown RBP9.93□□□□□ -0.82
LSAMP-205ENST00000490035 CCDC117Q8IWD4 279 aaPredicted RBP9.93□□□□□ -0.82
LSAMP-205ENST00000490035 BAG1Q99933 345 aaPredicted RBP9.93□□□□□ -0.82
LSAMP-205ENST00000490035 NKIRAS1Q9NYS0 192 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 CNPY2Q9Y2B0 182 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 SRGAP1Q7Z6B7 1085 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 CCDC84Q86UT8 332 aaPredicted RBP9.93□□□□□ -0.82
LSAMP-205ENST00000490035 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.93□□□□□ -0.82
LSAMP-205ENST00000490035 RSRC1Q96IZ7 334 aaKnown RBP9.93□□□□□ -0.82
LSAMP-205ENST00000490035 ZC3H12CQ9C0D7 883 aaKnown RBP9.93□□□□□ -0.82
LSAMP-205ENST00000490035 CAPN2P17655 700 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 IWS1Q96ST2 819 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 ATP11AP98196 1134 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 MCM6Q14566 821 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 LGSNQ5TDP6 509 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 CCDC144CPQ8IYA2 1237 aa9.93□□□□□ -0.82
LSAMP-205ENST00000490035 ZWINTO95229 277 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 XAGE3Q8WTP9 111 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 PPP1R7Q15435 360 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 SH2D4BQ5SQS7 431 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 ATRIPQ8WXE1 791 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 LDHBP07195 334 aaKnown RBP9.92□□□□□ -0.82
LSAMP-205ENST00000490035 VIMP08670 466 aaKnown RBP9.92□□□□□ -0.82
LSAMP-205ENST00000490035 RASSF2P50749 326 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms