RNA–Protein interactions for RNA: ENST00000489917.1

SPATA9-206, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-206ENST00000489917 SNX29Q8TEQ0 813 aa6.9□□□□□ -1.3
SPATA9-206ENST00000489917 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
SPATA9-206ENST00000489917 BRPF3Q9ULD4 1205 aa6.9□□□□□ -1.3
SPATA9-206ENST00000489917 PLCH2O75038 1416 aa6.9□□□□□ -1.31
SPATA9-206ENST00000489917 DAPK1P53355 1430 aa6.9□□□□□ -1.31
SPATA9-206ENST00000489917 SETD5Q9C0A6 1442 aa6.9□□□□□ -1.31
SPATA9-206ENST00000489917 ARHGAP5Q13017 1502 aa6.9□□□□□ -1.31
SPATA9-206ENST00000489917 CROCC2H7BZ55 1655 aa6.9□□□□□ -1.31
SPATA9-206ENST00000489917 NFKBIEO00221 500 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 TRPA1O75762 1119 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 NRG1Q02297 640 aaPredicted RBP6.89□□□□□ -1.31
SPATA9-206ENST00000489917 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 CCDC27Q2M243 656 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 POLR3GLQ9BT43 218 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 DZANK1Q9NVP4 752 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 USP21Q9UK80 565 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 PPME1Q9Y570 386 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 RAB3GAP2Q9H2M9 1393 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 MAPKBP1O60336 1514 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 ARAP3Q8WWN8 1544 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 ARHGEF5Q12774 1597 aa6.89□□□□□ -1.31
SPATA9-206ENST00000489917 GCC2Q8IWJ2 1684 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 MBD5Q9P267 1494 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 HFM1A2PYH4 1435 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 AKNAQ7Z591 1439 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 LINC01387J3KSC0 135 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 DLL1O00548 723 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 ADAM23O75077 832 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 CDC27P30260 824 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 TXNDC11Q6PKC3 985 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 IGF2-ASQ6U949 168 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 HHIPQ96QV1 700 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 MUC3BQ9H195 1237 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 SH2B1Q9NRF2 756 aaPredicted RBP6.88□□□□□ -1.31
SPATA9-206ENST00000489917 TPSG1Q9NRR2 321 aa6.88□□□□□ -1.31
SPATA9-206ENST00000489917 ADGBQ8N7X0 1667 aa6.87□□□□□ -1.31
SPATA9-206ENST00000489917 PLEKHH2Q8IVE3 1493 aa6.87□□□□□ -1.31
SPATA9-206ENST00000489917 NAIPQ13075 1403 aa6.87□□□□□ -1.31
SPATA9-206ENST00000489917 KIAA1107Q9UPP5 1409 aa6.87□□□□□ -1.31
SPATA9-206ENST00000489917 ROCK1Q13464 1354 aa6.87□□□□□ -1.31
SPATA9-206ENST00000489917 NDUFB5O43674 189 aa6.87□□□□□ -1.31
SPATA9-206ENST00000489917 EPHA1P21709 976 aa6.87□□□□□ -1.31
SPATA9-206ENST00000489917 EFCAB2Q5VUJ9 269 aa6.87□□□□□ -1.31
SPATA9-206ENST00000489917 TXNRD3Q86VQ6 643 aa6.87□□□□□ -1.31
SPATA9-206ENST00000489917 ADAM19Q9H013 955 aa6.87□□□□□ -1.31
SPATA9-206ENST00000489917 ZFYVE28Q9HCC9 887 aa6.87□□□□□ -1.31
SPATA9-206ENST00000489917 SRA1Q9HD15 236 aaKnown RBP6.87□□□□□ -1.31
SPATA9-206ENST00000489917 SOWAHDA6NJG2 315 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 K7ELQ4 463 aaPredicted RBP6.86□□□□□ -1.31
SPATA9-206ENST00000489917 PDE2AO00408 941 aaPredicted RBP6.86□□□□□ -1.31
SPATA9-206ENST00000489917 PTPRAP18433 802 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 CDC25BP30305 580 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 HNRNPMP52272 730 aaKnown RBP eCLIP6.86□□□□□ -1.31
SPATA9-206ENST00000489917 MAP4K3Q8IVH8 894 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 GALNT11Q8NCW6 608 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 OSMRQ99650 979 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 ZKSCAN3Q9BRR0 538 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 RRP7BPQ9NSQ0 103 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 AMOTL2Q9Y2J4 779 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 GLI2P10070 1586 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 ABCC1P33527 1531 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 SYCP2Q9BX26 1530 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 ARHGEF12Q9NZN5 1544 aa6.86□□□□□ -1.31
SPATA9-206ENST00000489917 ADGRL2O95490 1459 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 SHANK2Q9UPX8 1470 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 DHX57Q6P158 1386 aaKnown RBP6.85□□□□□ -1.31
SPATA9-206ENST00000489917 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 TM4SF5O14894 197 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 POLR3DP05423 398 aaPredicted RBP6.85□□□□□ -1.31
SPATA9-206ENST00000489917 NEFLP07196 543 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 EDN3P14138 238 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 PEAR1Q5VY43 1037 aaPredicted RBP6.85□□□□□ -1.31
SPATA9-206ENST00000489917 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
SPATA9-206ENST00000489917 WFDC12Q8WWY7 111 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 FAM129BQ96TA1 746 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 LATS2Q9NRM7 1088 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 FANCAO15360 1455 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 CCDC141Q6ZP82 1450 aa6.85□□□□□ -1.31
SPATA9-206ENST00000489917 NCOA1Q15788 1441 aa6.84□□□□□ -1.31
SPATA9-206ENST00000489917 C9orf84Q5VXU9 1444 aa6.84□□□□□ -1.31
SPATA9-206ENST00000489917 CD109Q6YHK3 1445 aa6.84□□□□□ -1.31
SPATA9-206ENST00000489917 KDM6BO15054 1643 aa6.84□□□□□ -1.31
SPATA9-206ENST00000489917 MAP3K4Q9Y6R4 1608 aa6.84□□□□□ -1.31
SPATA9-206ENST00000489917 MAST1Q9Y2H9 1570 aa6.84□□□□□ -1.31
SPATA9-206ENST00000489917 NOS3P29474 1203 aa6.84□□□□□ -1.31
SPATA9-206ENST00000489917 ZEB1P37275 1124 aaPredicted RBP6.84□□□□□ -1.31
SPATA9-206ENST00000489917 IREB2P48200 963 aaKnown RBP6.84□□□□□ -1.31
SPATA9-206ENST00000489917 RSPO4Q2I0M5 234 aaPredicted RBP6.84□□□□□ -1.31
SPATA9-206ENST00000489917 NKAPLQ5M9Q1 402 aa6.84□□□□□ -1.31
SPATA9-206ENST00000489917 NXPE3Q969Y0 559 aa6.84□□□□□ -1.31
SPATA9-206ENST00000489917 CITED4Q96RK1 184 aa6.84□□□□□ -1.31
SPATA9-206ENST00000489917 CARD10Q9BWT7 1032 aa6.84□□□□□ -1.31
SPATA9-206ENST00000489917 MRPL18Q9H0U6 180 aaKnown RBP6.84□□□□□ -1.31
SPATA9-206ENST00000489917 ANKRD30AQ9BXX3 1397 aa6.83□□□□□ -1.32
SPATA9-206ENST00000489917 CFAP74Q9C0B2 1584 aa6.83□□□□□ -1.32
SPATA9-206ENST00000489917 DIP2BQ9P265 1576 aa6.83□□□□□ -1.32
SPATA9-206ENST00000489917 FAM177BA6PVY3 158 aa6.83□□□□□ -1.32
SPATA9-206ENST00000489917 FSCN2O14926 492 aa6.83□□□□□ -1.32
SPATA9-206ENST00000489917 IGHA2P01877 340 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms