RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 UBTFL1P0CB47 393 aaPredicted RBP14.82□□□□□ -0.04
SRSF4-204ENST00000489898 RLBP1P12271 317 aa14.82□□□□□ -0.04
SRSF4-204ENST00000489898 DLGAP5Q15398 846 aa14.82□□□□□ -0.04
SRSF4-204ENST00000489898 NBPF12Q5TAG4 269 aaPredicted RBP14.82□□□□□ -0.04
SRSF4-204ENST00000489898 CCDC102AQ96A19 550 aa14.82□□□□□ -0.04
SRSF4-204ENST00000489898 CLMNQ96JQ2 1002 aa14.82□□□□□ -0.04
SRSF4-204ENST00000489898 RNF186Q9NXI6 227 aa14.82□□□□□ -0.04
SRSF4-204ENST00000489898 HDAC9Q9UKV0 1011 aa14.82□□□□□ -0.04
SRSF4-204ENST00000489898 TTF2Q9UNY4 1162 aaKnown RBP14.82□□□□□ -0.04
SRSF4-204ENST00000489898 ZBED9Q6R2W3 1325 aa14.82□□□□□ -0.04
SRSF4-204ENST00000489898 MGAMO43451 1857 aa14.81□□□□□ -0.04
SRSF4-204ENST00000489898 ADORA1P30542 326 aa14.81□□□□□ -0.04
SRSF4-204ENST00000489898 CRKP46108 304 aa14.81□□□□□ -0.04
SRSF4-204ENST00000489898 DIEXFQ68CQ4 756 aaKnown RBP14.81□□□□□ -0.04
SRSF4-204ENST00000489898 ATF7IPQ6VMQ6 1270 aa14.81□□□□□ -0.04
SRSF4-204ENST00000489898 SIL1Q9H173 461 aa14.81□□□□□ -0.04
SRSF4-204ENST00000489898 ZNF70Q9UC06 446 aaPredicted RBP14.81□□□□□ -0.04
SRSF4-204ENST00000489898 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
SRSF4-204ENST00000489898 PPP2R3BQ9Y5P8 575 aa14.81□□□□□ -0.04
SRSF4-204ENST00000489898 MYH7P12883 1935 aa14.8□□□□□ -0.04
SRSF4-204ENST00000489898 PNMA6EA0A0J9YXQ4 647 aa14.8□□□□□ -0.04
SRSF4-204ENST00000489898 APOBEC3HQ6NTF7 200 aaKnown RBP14.8□□□□□ -0.04
SRSF4-204ENST00000489898 DZIP1LQ8IYY4 767 aaKnown RBP14.8□□□□□ -0.04
SRSF4-204ENST00000489898 ZNF384Q8TF68 577 aa14.8□□□□□ -0.04
SRSF4-204ENST00000489898 LPIN2Q92539 896 aa14.8□□□□□ -0.04
SRSF4-204ENST00000489898 ABHD8Q96I13 439 aa14.8□□□□□ -0.04
SRSF4-204ENST00000489898 TDRD3Q9H7E2 651 aaKnown RBP14.8□□□□□ -0.04
SRSF4-204ENST00000489898 CAPN15O75808 1086 aa14.79□□□□□ -0.04
SRSF4-204ENST00000489898 PRDX5P30044 214 aa14.79□□□□□ -0.04
SRSF4-204ENST00000489898 PHKA1P46020 1223 aa14.79□□□□□ -0.04
SRSF4-204ENST00000489898 HDLBPQ00341 1268 aaKnown RBP14.79□□□□□ -0.04
SRSF4-204ENST00000489898 RASA3Q14644 834 aa14.79□□□□□ -0.04
SRSF4-204ENST00000489898 TMEM57Q8N5G2 664 aa14.79□□□□□ -0.04
SRSF4-204ENST00000489898 CFHR5Q9BXR6 569 aa14.79□□□□□ -0.04
SRSF4-204ENST00000489898 R3HDMLQ9H3Y0 253 aa14.79□□□□□ -0.04
SRSF4-204ENST00000489898 SALL1Q9NSC2 1324 aa14.79□□□□□ -0.04
SRSF4-204ENST00000489898 CACNB3P54284 484 aa14.78□□□□□ -0.04
SRSF4-204ENST00000489898 HNRNPUQ00839 825 aaKnown RBP eCLIP14.78□□□□□ -0.04
SRSF4-204ENST00000489898 CAP1Q01518 475 aa14.78□□□□□ -0.04
SRSF4-204ENST00000489898 CHAF1AQ13111 956 aaPredicted RBP14.78□□□□□ -0.04
SRSF4-204ENST00000489898 ATP2B3Q16720 1220 aa14.78□□□□□ -0.04
SRSF4-204ENST00000489898 SPRYD7Q5W111 196 aa14.78□□□□□ -0.04
SRSF4-204ENST00000489898 ZDHHC15Q96MV8 337 aa14.78□□□□□ -0.04
SRSF4-204ENST00000489898 TMEM39BQ9GZU3 492 aa14.78□□□□□ -0.04
SRSF4-204ENST00000489898 PDS5AQ29RF7 1337 aaKnown RBP14.77□□□□□ -0.04
SRSF4-204ENST00000489898 USP2O75604 605 aaPredicted RBP14.77□□□□□ -0.05
SRSF4-204ENST00000489898 TM4SF4P48230 202 aa14.77□□□□□ -0.05
SRSF4-204ENST00000489898 PRKG1Q13976 671 aa14.77□□□□□ -0.05
SRSF4-204ENST00000489898 MCOLN1Q9GZU1 580 aa14.77□□□□□ -0.05
SRSF4-204ENST00000489898 VEZTQ9HBM0 779 aa14.77□□□□□ -0.05
SRSF4-204ENST00000489898 ANGEL1Q9UNK9 670 aaKnown RBP14.77□□□□□ -0.05
SRSF4-204ENST00000489898 NAV1Q8NEY1 1877 aa14.76□□□□□ -0.05
SRSF4-204ENST00000489898 GAKO14976 1311 aa14.76□□□□□ -0.05
SRSF4-204ENST00000489898 IGF2BP3O00425 579 aaKnown RBP eCLIP14.76□□□□□ -0.05
SRSF4-204ENST00000489898 TRPA1O75762 1119 aa14.76□□□□□ -0.05
SRSF4-204ENST00000489898 IL15P40933 162 aaPredicted RBP14.76□□□□□ -0.05
SRSF4-204ENST00000489898 RASGRF1Q13972 1273 aa14.76□□□□□ -0.05
SRSF4-204ENST00000489898 POLA2Q14181 598 aa14.76□□□□□ -0.05
SRSF4-204ENST00000489898 DIXDC1Q155Q3 683 aa14.76□□□□□ -0.05
SRSF4-204ENST00000489898 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.76□□□□□ -0.05
SRSF4-204ENST00000489898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.05
SRSF4-204ENST00000489898 TBC1D22AQ8WUA7 517 aa14.76□□□□□ -0.05
SRSF4-204ENST00000489898 CLUAP1Q96AJ1 413 aa14.76□□□□□ -0.05
SRSF4-204ENST00000489898 WNK4Q96J92 1243 aa14.76□□□□□ -0.05
SRSF4-204ENST00000489898 DAGLAQ9Y4D2 1042 aa14.76□□□□□ -0.05
SRSF4-204ENST00000489898 MYH1P12882 1939 aa14.76□□□□□ -0.05
SRSF4-204ENST00000489898 IFIT1P09914 478 aaKnown RBP14.75□□□□□ -0.05
SRSF4-204ENST00000489898 SLC5A1P13866 664 aa14.75□□□□□ -0.05
SRSF4-204ENST00000489898 CNKSR2Q8WXI2 1034 aa14.75□□□□□ -0.05
SRSF4-204ENST00000489898 MRIQ9BWK5 157 aa14.75□□□□□ -0.05
SRSF4-204ENST00000489898 SUGT1Q9Y2Z0 365 aa14.75□□□□□ -0.05
SRSF4-204ENST00000489898 SRGAP3O43295 1099 aa14.74□□□□□ -0.05
SRSF4-204ENST00000489898 GNAI3P08754 354 aa14.74□□□□□ -0.05
SRSF4-204ENST00000489898 NFIAQ12857 509 aa14.74□□□□□ -0.05
SRSF4-204ENST00000489898 MKRN3Q13064 507 aaKnown RBP14.74□□□□□ -0.05
SRSF4-204ENST00000489898 CAVIN4Q5BKX8 364 aa14.74□□□□□ -0.05
SRSF4-204ENST00000489898 NOM1Q5C9Z4 860 aaKnown RBP14.74□□□□□ -0.05
SRSF4-204ENST00000489898 CCDC102BQ68D86 513 aa14.74□□□□□ -0.05
SRSF4-204ENST00000489898 HHIPL2Q6UWX4 724 aa14.74□□□□□ -0.05
SRSF4-204ENST00000489898 PI16Q6UXB8 463 aa14.74□□□□□ -0.05
SRSF4-204ENST00000489898 BEGAINQ9BUH8 593 aa14.74□□□□□ -0.05
SRSF4-204ENST00000489898 A0A1B0GUL7 405 aa14.73□□□□□ -0.05
SRSF4-204ENST00000489898 TCP10L2B9ZVM9 353 aa14.73□□□□□ -0.05
SRSF4-204ENST00000489898 ZBTB48P10074 688 aaPredicted RBP14.73□□□□□ -0.05
SRSF4-204ENST00000489898 TFCP2Q12800 502 aa14.73□□□□□ -0.05
SRSF4-204ENST00000489898 FKBP1CQ5VVH2 108 aa14.73□□□□□ -0.05
SRSF4-204ENST00000489898 TEKT1Q969V4 418 aa14.73□□□□□ -0.05
SRSF4-204ENST00000489898 MS4A4AQ96JQ5 239 aa14.73□□□□□ -0.05
SRSF4-204ENST00000489898 PTPN18Q99952 460 aa14.73□□□□□ -0.05
SRSF4-204ENST00000489898 FAM198AQ9UFP1 575 aa14.73□□□□□ -0.05
SRSF4-204ENST00000489898 SNCAIPQ9Y6H5 919 aa14.73□□□□□ -0.05
SRSF4-204ENST00000489898 COL2A1P02458 1487 aaPredicted RBP14.73□□□□□ -0.05
SRSF4-204ENST00000489898 TESPA1A2RU30 521 aaPredicted RBP14.72□□□□□ -0.05
SRSF4-204ENST00000489898 UNCXA6NJT0 531 aa14.72□□□□□ -0.05
SRSF4-204ENST00000489898 NF2P35240 595 aa14.72□□□□□ -0.05
SRSF4-204ENST00000489898 TIMM10P62072 90 aa14.72□□□□□ -0.05
SRSF4-204ENST00000489898 VGLL4Q14135 290 aa14.72□□□□□ -0.05
SRSF4-204ENST00000489898 ZKSCAN2Q63HK3 967 aa14.72□□□□□ -0.05
SRSF4-204ENST00000489898 ARMC9Q7Z3E5 817 aa14.72□□□□□ -0.05
SRSF4-204ENST00000489898 FAM83AQ86UY5 434 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms