RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 SAMD7Q7Z3H4 446 aa11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 GTF3C6Q969F1 213 aa11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CDCA7Q9BWT1 371 aaPredicted RBP11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 TAF6LQ9Y6J9 622 aa11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 MAST3O60307 1309 aa11.33□□□□□ -0.6
RAB3GAP1-205ENST00000489858 LAMB2P55268 1798 aa11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 GRXCR2A6NFK2 248 aa11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 ESPNB1AK53 854 aa11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 SMAPO00193 183 aa11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 FIBPO43427 364 aa11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CSF1RP07333 972 aa11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 ZFYP08048 801 aaPredicted RBP11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CLCN1P35523 988 aa11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 TIMM10P62072 90 aa11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 LARP1BQ659C4 914 aaKnown RBP11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 TATDN2Q93075 761 aa11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CHMP4CQ96CF2 233 aa11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 SEC62Q99442 399 aaKnown RBP11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 PUS3Q9BZE2 481 aaKnown RBP11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 NUP98P52948 1817 aa11.32□□□□□ -0.6
RAB3GAP1-205ENST00000489858 EXOC5O00471 708 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CYP21A2P08686 494 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CYP19A1P11511 503 aaPredicted RBP11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CTSWP56202 376 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 KRT85P78386 507 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 FGD1P98174 961 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 ATP2B3Q16720 1220 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 Q6ZUG5 572 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 NLRP10Q86W26 655 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 FAM89AQ96GI7 184 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 XAGE2Q96GT9 111 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 TCEANC2Q96MN5 208 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 KIF3AQ9Y496 699 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 NWD2Q9ULI1 1742 aa11.31□□□□□ -0.6
RAB3GAP1-205ENST00000489858 ANKRD18BA2A2Z9 1011 aa11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 ERVV-1B6SEH8 477 aa11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 OSBPP22059 807 aa11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 IL6STP40189 918 aaPredicted RBP11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 DNM1Q05193 864 aaKnown RBP11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 HS1BP3Q53T59 392 aa11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 TJAP1Q5JTD0 557 aa11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 METTL24Q5JXM2 366 aa11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 FAM184AQ8NB25 1140 aa11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 LLPHQ9BRT6 129 aaKnown RBP11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CTNNA3Q9UI47 895 aa11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 TCHHQ07283 1943 aa11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 ELP1O95163 1332 aa11.3□□□□□ -0.6
RAB3GAP1-205ENST00000489858 ATRNO75882 1429 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 C3orf80F5H4A9 247 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 M0R2C6 588 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 PFKFB2O60825 505 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 GPTP24298 496 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 ADORA1P30542 326 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 STK3Q13188 491 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 ZSCAN25Q6NSZ9 544 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CDC37L1Q7L3B6 337 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 DHX32Q7L7V1 743 aaKnown RBP11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 PDLIM2Q96JY6 352 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 AK7Q96M32 723 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 ZBTB1Q9Y2K1 713 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 MYH15Q9Y2K3 1946 aa11.29□□□□□ -0.6
RAB3GAP1-205ENST00000489858 IRS4O14654 1257 aaPredicted RBP11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 PDE8AO60658 829 aa11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CHGBP05060 677 aa11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 HSPD1P10809 573 aaKnown RBP11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 ITGA6P23229 1130 aa11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 HMGN5P82970 282 aaKnown RBP11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 FKBP4Q02790 459 aaKnown RBP eCLIP11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 UVSSAQ2YD98 709 aa11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 STOX1Q6ZVD7 989 aa11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 TTLL11Q8NHH1 800 aa11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 APPBP2Q92624 585 aa11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 BRF1Q92994 677 aa11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 SYTL4Q96C24 671 aaPredicted RBP11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CCDC85AQ96PX6 553 aaPredicted RBP11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 CNNM1Q9NRU3 951 aa11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 TRMT112Q9UI30 125 aaKnown RBP11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 THRAP3Q9Y2W1 955 aaKnown RBP11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 DDX60Q8IY21 1712 aaKnown RBP11.28□□□□□ -0.6
RAB3GAP1-205ENST00000489858 BCORQ6W2J9 1755 aa11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 E7EWF7 191 aa11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 H3BQV1 296 aa11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 UQCRFS1P1P0C7P4 283 aa11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 COL9A3Q14050 684 aaPredicted RBP11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 TTF1Q15361 905 aaPredicted RBP11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 HLFQ16534 295 aa11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 WASHC4Q2M389 1173 aa11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 LDHAL6AQ6ZMR3 332 aa11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 PAXIP1Q6ZW49 1069 aaPredicted RBP11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ZSCAN30Q86W11 494 aa11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SMARCC2Q8TAQ2 1214 aa11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ZNF512BQ96KM6 892 aaPredicted RBP11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SCAND2PQ9GZW5 306 aaPredicted RBP11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 GREM2Q9H772 168 aa11.27□□□□□ -0.61
RAB3GAP1-205ENST00000489858 RIPOR2Q9Y4F9 1068 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms