RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 HTTP42858 3142 aa18.99■□□□□ 0.63
FAM3D-204ENST00000489857 CNKSR2Q8WXI2 1034 aa18.98■□□□□ 0.63
FAM3D-204ENST00000489857 MS4A4AQ96JQ5 239 aa18.98■□□□□ 0.63
FAM3D-204ENST00000489857 TMEM39BQ9GZU3 492 aa18.98■□□□□ 0.63
FAM3D-204ENST00000489857 RIPOR2Q9Y4F9 1068 aa18.98■□□□□ 0.63
FAM3D-204ENST00000489857 ARAP2Q8WZ64 1704 aa18.97■□□□□ 0.63
FAM3D-204ENST00000489857 TCP10L2B9ZVM9 353 aa18.97■□□□□ 0.63
FAM3D-204ENST00000489857 NBPF7P0C2Y1 421 aaPredicted RBP18.97■□□□□ 0.63
FAM3D-204ENST00000489857 CRKP46108 304 aa18.97■□□□□ 0.63
FAM3D-204ENST00000489857 SP3Q02447 781 aa18.97■□□□□ 0.63
FAM3D-204ENST00000489857 INTS3Q68E01 1043 aaKnown RBP18.97■□□□□ 0.63
FAM3D-204ENST00000489857 BRI3BPQ8WY22 251 aa18.97■□□□□ 0.63
FAM3D-204ENST00000489857 EFCC1Q9HA90 598 aa18.97■□□□□ 0.63
FAM3D-204ENST00000489857 FBXO33Q7Z6M2 555 aa18.96■□□□□ 0.63
FAM3D-204ENST00000489857 IQSEC3Q9UPP2 1182 aaPredicted RBP18.96■□□□□ 0.63
FAM3D-204ENST00000489857 UTYO14607 1347 aa18.96■□□□□ 0.63
FAM3D-204ENST00000489857 VGLL4Q14135 290 aa18.95■□□□□ 0.62
FAM3D-204ENST00000489857 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.95■□□□□ 0.62
FAM3D-204ENST00000489857 ARMC5Q96C12 935 aa18.95■□□□□ 0.62
FAM3D-204ENST00000489857 BICC1Q9H694 974 aaKnown RBP18.95■□□□□ 0.62
FAM3D-204ENST00000489857 MROH5Q6ZUA9 1318 aa18.95■□□□□ 0.62
FAM3D-204ENST00000489857 CCL15-CCL14A0A0B4J2E2 113 aa18.94■□□□□ 0.62
FAM3D-204ENST00000489857 MAP3K9P80192 1104 aa18.94■□□□□ 0.62
FAM3D-204ENST00000489857 CHAF1AQ13111 956 aaPredicted RBP18.94■□□□□ 0.62
FAM3D-204ENST00000489857 CCL15Q16663 113 aa18.94■□□□□ 0.62
FAM3D-204ENST00000489857 RABL6Q3YEC7 729 aaPredicted RBP18.94■□□□□ 0.62
FAM3D-204ENST00000489857 LRRC24Q50LG9 513 aa18.94■□□□□ 0.62
FAM3D-204ENST00000489857 ANKRD44Q8N8A2 993 aa18.94■□□□□ 0.62
FAM3D-204ENST00000489857 TNNI2P48788 182 aa18.93■□□□□ 0.62
FAM3D-204ENST00000489857 CACNB3P54284 484 aa18.93■□□□□ 0.62
FAM3D-204ENST00000489857 ANP32CO43423 234 aa18.92■□□□□ 0.62
FAM3D-204ENST00000489857 GTF2A2P52657 109 aa18.92■□□□□ 0.62
FAM3D-204ENST00000489857 HDLBPQ00341 1268 aaKnown RBP18.92■□□□□ 0.62
FAM3D-204ENST00000489857 TAF1CQ15572 869 aaPredicted RBP18.92■□□□□ 0.62
FAM3D-204ENST00000489857 METTL24Q5JXM2 366 aa18.92■□□□□ 0.62
FAM3D-204ENST00000489857 VPS37DQ86XT2 251 aa18.92■□□□□ 0.62
FAM3D-204ENST00000489857 FAM43AQ8N2R8 423 aa18.92■□□□□ 0.62
FAM3D-204ENST00000489857 VGLL2Q8N8G2 317 aa18.92■□□□□ 0.62
FAM3D-204ENST00000489857 OTUD5Q96G74 571 aa18.92■□□□□ 0.62
FAM3D-204ENST00000489857 RBBP6Q7Z6E9 1792 aaKnown RBP18.91■□□□□ 0.62
FAM3D-204ENST00000489857 EN2P19622 333 aaPredicted RBP18.91■□□□□ 0.62
FAM3D-204ENST00000489857 TBC1D22AQ8WUA7 517 aa18.91■□□□□ 0.62
FAM3D-204ENST00000489857 ZFYVE28Q9HCC9 887 aa18.91■□□□□ 0.62
FAM3D-204ENST00000489857 CSADQ9Y600 493 aa18.91■□□□□ 0.62
FAM3D-204ENST00000489857 SNCAIPQ9Y6H5 919 aa18.91■□□□□ 0.62
FAM3D-204ENST00000489857 KIAA0100Q14667 2235 aaKnown RBP18.9■□□□□ 0.62
FAM3D-204ENST00000489857 SPDYE5A6NIY4 337 aa18.9■□□□□ 0.62
FAM3D-204ENST00000489857 PDE8BO95263 885 aa18.9■□□□□ 0.62
FAM3D-204ENST00000489857 BCAMP50895 628 aa18.9■□□□□ 0.62
FAM3D-204ENST00000489857 CAVIN4Q5BKX8 364 aa18.9■□□□□ 0.62
FAM3D-204ENST00000489857 KLHDC4Q8TBB5 520 aa18.9■□□□□ 0.62
FAM3D-204ENST00000489857 TEKT1Q969V4 418 aa18.9■□□□□ 0.62
FAM3D-204ENST00000489857 GCC1Q96CN9 775 aa18.9■□□□□ 0.62
FAM3D-204ENST00000489857 FRAT2O75474 233 aaPredicted RBP18.89■□□□□ 0.61
FAM3D-204ENST00000489857 APOBEC3HQ6NTF7 200 aaKnown RBP18.89■□□□□ 0.61
FAM3D-204ENST00000489857 MRPL50Q8N5N7 158 aaKnown RBP18.89■□□□□ 0.61
FAM3D-204ENST00000489857 ZNF333Q96JL9 665 aa18.89■□□□□ 0.61
FAM3D-204ENST00000489857 ZDHHC15Q96MV8 337 aa18.89■□□□□ 0.61
FAM3D-204ENST00000489857 PTCH2Q9Y6C5 1203 aa18.89■□□□□ 0.61
FAM3D-204ENST00000489857 ZNF521Q96K83 1311 aa18.89■□□□□ 0.61
FAM3D-204ENST00000489857 FAM9BQ8IZU0 186 aa18.88■□□□□ 0.61
FAM3D-204ENST00000489857 ZKSCAN4Q969J2 545 aaPredicted RBP18.88■□□□□ 0.61
FAM3D-204ENST00000489857 MRIQ9BWK5 157 aa18.88■□□□□ 0.61
FAM3D-204ENST00000489857 FGFR2P21802 821 aa18.87■□□□□ 0.61
FAM3D-204ENST00000489857 HABP4Q5JVS0 413 aaKnown RBP18.87■□□□□ 0.61
FAM3D-204ENST00000489857 FKBP1CQ5VVH2 108 aa18.87■□□□□ 0.61
FAM3D-204ENST00000489857 FAM83AQ86UY5 434 aa18.87■□□□□ 0.61
FAM3D-204ENST00000489857 ERO1BQ86YB8 467 aa18.87■□□□□ 0.61
FAM3D-204ENST00000489857 WRNIP1Q96S55 665 aa18.87■□□□□ 0.61
FAM3D-204ENST00000489857 KIF16BQ96L93 1317 aa18.86■□□□□ 0.61
FAM3D-204ENST00000489857 BTBD19C9JJ37 291 aa18.86■□□□□ 0.61
FAM3D-204ENST00000489857 CETPP11597 493 aa18.86■□□□□ 0.61
FAM3D-204ENST00000489857 ARHGAP39Q9C0H5 1083 aa18.86■□□□□ 0.61
FAM3D-204ENST00000489857 TMOD2Q9NZR1 351 aa18.86■□□□□ 0.61
FAM3D-204ENST00000489857 MKI67P46013 3256 aaKnown RBP18.85■□□□□ 0.61
FAM3D-204ENST00000489857 RPAP1Q9BWH6 1393 aaPredicted RBP18.85■□□□□ 0.61
FAM3D-204ENST00000489857 IRF6O14896 467 aa18.85■□□□□ 0.61
FAM3D-204ENST00000489857 TLR2O60603 784 aa18.85■□□□□ 0.61
FAM3D-204ENST00000489857 ARHGEF6Q15052 776 aa18.85■□□□□ 0.61
FAM3D-204ENST00000489857 SLC9C1Q4G0N8 1177 aa18.85■□□□□ 0.61
FAM3D-204ENST00000489857 TMEM106CQ9BVX2 250 aa18.85■□□□□ 0.61
FAM3D-204ENST00000489857 USP44Q9H0E7 712 aa18.85■□□□□ 0.61
FAM3D-204ENST00000489857 SUGT1Q9Y2Z0 365 aa18.85■□□□□ 0.61
FAM3D-204ENST00000489857 CENPFP49454 3210 aa18.84■□□□□ 0.61
FAM3D-204ENST00000489857 MAST3O60307 1309 aa18.84■□□□□ 0.61
FAM3D-204ENST00000489857 PTPRCP08575 1304 aa18.84■□□□□ 0.61
FAM3D-204ENST00000489857 RFX5P48382 616 aaPredicted RBP18.84■□□□□ 0.61
FAM3D-204ENST00000489857 PPIL2Q13356 520 aa18.84■□□□□ 0.61
FAM3D-204ENST00000489857 SNAPC2Q13487 334 aa18.84■□□□□ 0.61
FAM3D-204ENST00000489857 PUM3Q15397 648 aaKnown RBP18.84■□□□□ 0.61
FAM3D-204ENST00000489857 HHIPL2Q6UWX4 724 aa18.84■□□□□ 0.61
FAM3D-204ENST00000489857 ZCCHC17Q9NP64 241 aaKnown RBP18.84■□□□□ 0.61
FAM3D-204ENST00000489857 ZSWIM8A7E2V4 1837 aa18.84■□□□□ 0.61
FAM3D-204ENST00000489857 IFIT1P09914 478 aaKnown RBP18.83■□□□□ 0.6
FAM3D-204ENST00000489857 INPP5BP32019 993 aa18.83■□□□□ 0.6
FAM3D-204ENST00000489857 LACTBP83111 547 aaPredicted RBP18.83■□□□□ 0.6
FAM3D-204ENST00000489857 NBPF11Q86T75 865 aa18.83■□□□□ 0.6
FAM3D-204ENST00000489857 SSH1Q8WYL5 1049 aa18.83■□□□□ 0.6
FAM3D-204ENST00000489857 HOOK2Q96ED9 719 aa18.83■□□□□ 0.6
FAM3D-204ENST00000489857 EYA2O00167 538 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms