RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 NME9Q86XW9 330 aa9.01□□□□□ -0.97
PRPF40A-210ENST00000489741 ACDQ96AP0 544 aa9.01□□□□□ -0.97
PRPF40A-210ENST00000489741 OXCT2Q9BYC2 517 aaPredicted RBP9.01□□□□□ -0.97
PRPF40A-210ENST00000489741 ENAMQ9NRM1 1142 aa9.01□□□□□ -0.97
PRPF40A-210ENST00000489741 ADAMTS8Q9UP79 889 aa9.01□□□□□ -0.97
PRPF40A-210ENST00000489741 GPC6Q9Y625 555 aaPredicted RBP9.01□□□□□ -0.97
PRPF40A-210ENST00000489741 RREB1Q92766 1687 aa9□□□□□ -0.97
PRPF40A-210ENST00000489741 CCDC7Q96M83 1385 aa9□□□□□ -0.97
PRPF40A-210ENST00000489741 C21orf2O43822 256 aa9□□□□□ -0.97
PRPF40A-210ENST00000489741 BCRP11274 1271 aa9□□□□□ -0.97
PRPF40A-210ENST00000489741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9□□□□□ -0.97
PRPF40A-210ENST00000489741 FAM200AQ8TCP9 573 aa9□□□□□ -0.97
PRPF40A-210ENST00000489741 TESK2Q96S53 571 aa9□□□□□ -0.97
PRPF40A-210ENST00000489741 PHACTR1Q9C0D0 580 aa9□□□□□ -0.97
PRPF40A-210ENST00000489741 PDGFDQ9GZP0 370 aaPredicted RBP9□□□□□ -0.97
PRPF40A-210ENST00000489741 ARHGEF15O94989 841 aa8.99□□□□□ -0.97
PRPF40A-210ENST00000489741 MAPTP10636 758 aaKnown RBP8.99□□□□□ -0.97
PRPF40A-210ENST00000489741 CD33P20138 364 aa8.99□□□□□ -0.97
PRPF40A-210ENST00000489741 CTBSQ01459 385 aa8.99□□□□□ -0.97
PRPF40A-210ENST00000489741 TXNRD1Q16881 649 aa8.99□□□□□ -0.97
PRPF40A-210ENST00000489741 C1orf53Q5VUE5 145 aa8.99□□□□□ -0.97
PRPF40A-210ENST00000489741 GAS2L2Q8NHY3 880 aa8.99□□□□□ -0.97
PRPF40A-210ENST00000489741 KLRG1Q96E93 195 aa8.99□□□□□ -0.97
PRPF40A-210ENST00000489741 ARXQ96QS3 562 aa8.99□□□□□ -0.97
PRPF40A-210ENST00000489741 NOVA2Q9UNW9 492 aaKnown RBP8.99□□□□□ -0.97
PRPF40A-210ENST00000489741 ABCC6O95255 1503 aa8.99□□□□□ -0.97
PRPF40A-210ENST00000489741 NUP188Q5SRE5 1749 aa8.98□□□□□ -0.97
PRPF40A-210ENST00000489741 FAM157BP0CG42 384 aa8.98□□□□□ -0.97
PRPF40A-210ENST00000489741 MARSP56192 900 aaKnown RBP8.98□□□□□ -0.97
PRPF40A-210ENST00000489741 TNP2Q05952 138 aa8.98□□□□□ -0.97
PRPF40A-210ENST00000489741 SAMD5Q5TGI4 173 aa8.98□□□□□ -0.97
PRPF40A-210ENST00000489741 HDGFL2Q7Z4V5 671 aaPredicted RBP8.98□□□□□ -0.97
PRPF40A-210ENST00000489741 TMC1Q8TDI8 760 aa8.98□□□□□ -0.97
PRPF40A-210ENST00000489741 IP6K1Q92551 441 aa8.98□□□□□ -0.97
PRPF40A-210ENST00000489741 LRRC37A3O60309 1634 aa8.98□□□□□ -0.97
PRPF40A-210ENST00000489741 EDC4Q6P2E9 1401 aaKnown RBP8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 C2CD2LO14523 706 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 IL2RBP14784 551 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 SLC15A2Q16348 729 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 STAG2Q8N3U4 1231 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 NEDD1Q8NHV4 660 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 ANKRD24Q8TF21 1146 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 C2orf49Q9BVC5 232 aaPredicted RBP8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 NLRP2Q9NX02 1062 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 TERF2IPQ9NYB0 399 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 GDF2Q9UK05 429 aaPredicted RBP8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 SERPINA10Q9UK55 444 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 A0A1W2PP64 1363 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 NINLQ9Y2I6 1382 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 TNS2Q63HR2 1409 aa8.97□□□□□ -0.97
PRPF40A-210ENST00000489741 AKAP12Q02952 1782 aa8.96□□□□□ -0.97
PRPF40A-210ENST00000489741 ST20-MTHFSA0A0A6YYL1 179 aa8.96□□□□□ -0.98
PRPF40A-210ENST00000489741 IGFBP4P22692 258 aa8.96□□□□□ -0.98
PRPF40A-210ENST00000489741 ALDH16A1Q8IZ83 802 aa8.96□□□□□ -0.98
PRPF40A-210ENST00000489741 GOLGA6L1Q8N7Z2 621 aa8.96□□□□□ -0.98
PRPF40A-210ENST00000489741 HSH2DQ96JZ2 352 aa8.96□□□□□ -0.98
PRPF40A-210ENST00000489741 ANKIB1Q9P2G1 1089 aa8.96□□□□□ -0.98
PRPF40A-210ENST00000489741 RGPD3A6NKT7 1758 aaPredicted RBP8.95□□□□□ -0.98
PRPF40A-210ENST00000489741 RGPD4Q7Z3J3 1758 aa8.95□□□□□ -0.98
PRPF40A-210ENST00000489741 RNF225M0QZC1 329 aaPredicted RBP8.95□□□□□ -0.98
PRPF40A-210ENST00000489741 OIP5O43482 229 aa8.95□□□□□ -0.98
PRPF40A-210ENST00000489741 ACSBG1Q96GR2 724 aa8.95□□□□□ -0.98
PRPF40A-210ENST00000489741 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
PRPF40A-210ENST00000489741 STK32BQ9NY57 414 aa8.95□□□□□ -0.98
PRPF40A-210ENST00000489741 PPP1R1BQ9UD71 204 aaPredicted RBP8.95□□□□□ -0.98
PRPF40A-210ENST00000489741 USP54Q70EL1 1684 aa8.94□□□□□ -0.98
PRPF40A-210ENST00000489741 SBF2Q86WG5 1849 aa8.94□□□□□ -0.98
PRPF40A-210ENST00000489741 ZBTB7AO95365 584 aa8.94□□□□□ -0.98
PRPF40A-210ENST00000489741 LAMC2Q13753 1193 aa8.94□□□□□ -0.98
PRPF40A-210ENST00000489741 C7orf43Q8WVR3 580 aa8.94□□□□□ -0.98
PRPF40A-210ENST00000489741 VTI1AQ96AJ9 217 aa8.94□□□□□ -0.98
PRPF40A-210ENST00000489741 MARK1Q9P0L2 795 aa8.94□□□□□ -0.98
PRPF40A-210ENST00000489741 GGA1Q9UJY5 639 aa8.94□□□□□ -0.98
PRPF40A-210ENST00000489741 PRR12Q9ULL5 1215 aa8.94□□□□□ -0.98
PRPF40A-210ENST00000489741 TONSLQ96HA7 1378 aa8.94□□□□□ -0.98
PRPF40A-210ENST00000489741 EFSO43281 561 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 ARAFP10398 606 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 FBLN1P23142 703 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 YY1P25490 414 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 HOXC9P31274 260 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 SLCO4C1Q6ZQN7 724 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 GALNT6Q8NCL4 622 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 SUSD3Q96L08 255 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 CEP63Q96MT8 703 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 MTFR1LQ9H019 292 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 MAP3K19Q56UN5 1328 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 MON2Q7Z3U7 1717 aa8.93□□□□□ -0.98
PRPF40A-210ENST00000489741 FYB1O15117 783 aa8.92□□□□□ -0.98
PRPF40A-210ENST00000489741 WEE1P30291 646 aa8.92□□□□□ -0.98
PRPF40A-210ENST00000489741 HIF1AQ16665 826 aa8.92□□□□□ -0.98
PRPF40A-210ENST00000489741 PODNQ7Z5L7 613 aa8.92□□□□□ -0.98
PRPF40A-210ENST00000489741 ZNF280CQ8ND82 737 aa8.92□□□□□ -0.98
PRPF40A-210ENST00000489741 STK32AQ8WU08 396 aa8.92□□□□□ -0.98
PRPF40A-210ENST00000489741 PBXIP1Q96AQ6 731 aa8.92□□□□□ -0.98
PRPF40A-210ENST00000489741 SCARF2Q96GP6 870 aaPredicted RBP8.92□□□□□ -0.98
PRPF40A-210ENST00000489741 COG3Q96JB2 828 aa8.92□□□□□ -0.98
PRPF40A-210ENST00000489741 SYT17Q9BSW7 474 aa8.92□□□□□ -0.98
PRPF40A-210ENST00000489741 HCN2Q9UL51 889 aa8.92□□□□□ -0.98
PRPF40A-210ENST00000489741 DNMT3AQ9Y6K1 912 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms