RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 SLFNL1Q499Z3 407 aa17■□□□□ 0.31
VPS26A-205ENST00000489656 DALRD3Q5D0E6 543 aaKnown RBP17■□□□□ 0.31
VPS26A-205ENST00000489656 ERICH6Q7L0X2 663 aa17■□□□□ 0.31
VPS26A-205ENST00000489656 MAGEB6Q8N7X4 407 aa17■□□□□ 0.31
VPS26A-205ENST00000489656 KIF2CQ99661 725 aa17■□□□□ 0.31
VPS26A-205ENST00000489656 DSCC1Q9BVC3 393 aa17■□□□□ 0.31
VPS26A-205ENST00000489656 VPS33BQ9H267 617 aa17■□□□□ 0.31
VPS26A-205ENST00000489656 ABCF2Q9UG63 623 aa17■□□□□ 0.31
VPS26A-205ENST00000489656 RIMBP2O15034 1052 aa16.99■□□□□ 0.31
VPS26A-205ENST00000489656 KIAA2012Q0VF49 1180 aa16.99■□□□□ 0.31
VPS26A-205ENST00000489656 CHAF1AQ13111 956 aaPredicted RBP16.99■□□□□ 0.31
VPS26A-205ENST00000489656 CCDC129Q6ZRS4 1044 aa16.99■□□□□ 0.31
VPS26A-205ENST00000489656 PODNQ7Z5L7 613 aa16.99■□□□□ 0.31
VPS26A-205ENST00000489656 TBC1D22AQ8WUA7 517 aa16.99■□□□□ 0.31
VPS26A-205ENST00000489656 KCNB2Q92953 911 aa16.99■□□□□ 0.31
VPS26A-205ENST00000489656 PUS7LQ9H0K6 701 aaKnown RBP16.99■□□□□ 0.31
VPS26A-205ENST00000489656 BAZ2AQ9UIF9 1905 aaKnown RBP16.99■□□□□ 0.31
VPS26A-205ENST00000489656 LAMB1P07942 1786 aa16.98■□□□□ 0.31
VPS26A-205ENST00000489656 NECTIN1Q15223 517 aa16.98■□□□□ 0.31
VPS26A-205ENST00000489656 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
VPS26A-205ENST00000489656 RAI14Q9P0K7 980 aa16.98■□□□□ 0.31
VPS26A-205ENST00000489656 SUGT1Q9Y2Z0 365 aa16.98■□□□□ 0.31
VPS26A-205ENST00000489656 SBF1O95248 1867 aa16.98■□□□□ 0.31
VPS26A-205ENST00000489656 GPAA1O43292 621 aa16.97■□□□□ 0.31
VPS26A-205ENST00000489656 IL27Q8NEV9 243 aa16.97■□□□□ 0.31
VPS26A-205ENST00000489656 DDRGK1Q96HY6 314 aa16.97■□□□□ 0.31
VPS26A-205ENST00000489656 RBM8AQ9Y5S9 174 aaKnown RBP16.97■□□□□ 0.31
VPS26A-205ENST00000489656 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
VPS26A-205ENST00000489656 LDHBP07195 334 aaKnown RBP16.96■□□□□ 0.31
VPS26A-205ENST00000489656 HSPD1P10809 573 aaKnown RBP16.96■□□□□ 0.31
VPS26A-205ENST00000489656 CYP7A1P22680 504 aa16.96■□□□□ 0.31
VPS26A-205ENST00000489656 PRDX5P30044 214 aa16.96■□□□□ 0.31
VPS26A-205ENST00000489656 FKBP1AP62942 108 aaKnown RBP16.96■□□□□ 0.31
VPS26A-205ENST00000489656 MECOMQ03112 1051 aa16.96■□□□□ 0.31
VPS26A-205ENST00000489656 NAA16Q6N069 864 aaPredicted RBP16.96■□□□□ 0.31
VPS26A-205ENST00000489656 ZNF384Q8TF68 577 aa16.96■□□□□ 0.31
VPS26A-205ENST00000489656 PPP1R1BQ9UD71 204 aaPredicted RBP16.96■□□□□ 0.31
VPS26A-205ENST00000489656 ZMYM6O95789 1325 aa16.96■□□□□ 0.3
VPS26A-205ENST00000489656 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
VPS26A-205ENST00000489656 RABEP1Q15276 862 aa16.95■□□□□ 0.3
VPS26A-205ENST00000489656 AIDAQ96BJ3 306 aa16.95■□□□□ 0.3
VPS26A-205ENST00000489656 STRBPQ96SI9 672 aaKnown RBP16.95■□□□□ 0.3
VPS26A-205ENST00000489656 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
VPS26A-205ENST00000489656 LTBP3Q9NS15 1303 aa16.95■□□□□ 0.3
VPS26A-205ENST00000489656 COL4A5P29400 1685 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 MYH1P12882 1939 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 TIAM2Q8IVF5 1701 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 G3V3G9 751 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 FOXP2O15409 715 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 PPIP5K2O43314 1243 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 ECE2O60344 883 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 GNAT2P19087 354 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 GTF2IP78347 998 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 GSTO1P78417 241 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 AOC3Q16853 763 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 DOK7Q18PE1 504 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 TSGA10IPQ3SY00 556 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 MFSD14BQ5SR56 506 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 DCAF8Q5TAQ9 597 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 VPS53Q5VIR6 699 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 RNF20Q5VTR2 975 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 CREB3L3Q68CJ9 461 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 DZIP1Q86YF9 867 aaKnown RBP16.94■□□□□ 0.3
VPS26A-205ENST00000489656 KLHL34Q8N239 644 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 JAG2Q9Y219 1238 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 ADAMTSL1Q8N6G6 1762 aa16.94■□□□□ 0.3
VPS26A-205ENST00000489656 DDX60LQ5H9U9 1706 aaKnown RBP16.93■□□□□ 0.3
VPS26A-205ENST00000489656 SLC27A2O14975 620 aa16.93■□□□□ 0.3
VPS26A-205ENST00000489656 MBD4O95243 580 aa16.93■□□□□ 0.3
VPS26A-205ENST00000489656 ALX1Q15699 326 aa16.93■□□□□ 0.3
VPS26A-205ENST00000489656 STRIP1Q5VSL9 837 aa16.93■□□□□ 0.3
VPS26A-205ENST00000489656 TTLL5Q6EMB2 1281 aa16.93■□□□□ 0.3
VPS26A-205ENST00000489656 ADGRA1Q86SQ6 560 aa16.93■□□□□ 0.3
VPS26A-205ENST00000489656 NLGN2Q8NFZ4 835 aa16.93■□□□□ 0.3
VPS26A-205ENST00000489656 RIOK1Q9BRS2 568 aaKnown RBP16.93■□□□□ 0.3
VPS26A-205ENST00000489656 DBNDD1Q9H9R9 158 aa16.93■□□□□ 0.3
VPS26A-205ENST00000489656 SNX14Q9Y5W7 946 aa16.93■□□□□ 0.3
VPS26A-205ENST00000489656 MAGEB6P1A0A0J9YX57 407 aa16.92■□□□□ 0.3
VPS26A-205ENST00000489656 LDHCP07864 332 aa16.92■□□□□ 0.3
VPS26A-205ENST00000489656 GRIK5Q16478 980 aa16.92■□□□□ 0.3
VPS26A-205ENST00000489656 SNX21Q969T3 373 aa16.92■□□□□ 0.3
VPS26A-205ENST00000489656 FAM163AQ96GL9 167 aaPredicted RBP16.92■□□□□ 0.3
VPS26A-205ENST00000489656 CTNNA3Q9UI47 895 aa16.92■□□□□ 0.3
VPS26A-205ENST00000489656 PATL2C9JE40 543 aaKnown RBP16.91■□□□□ 0.3
VPS26A-205ENST00000489656 ZKSCAN1P17029 563 aaPredicted RBP16.91■□□□□ 0.3
VPS26A-205ENST00000489656 IARSP41252 1262 aaKnown RBP16.91■□□□□ 0.3
VPS26A-205ENST00000489656 CERS3Q8IU89 383 aa16.91■□□□□ 0.3
VPS26A-205ENST00000489656 SLF2Q8IX21 1173 aa16.91■□□□□ 0.3
VPS26A-205ENST00000489656 RASEFQ8IZ41 740 aa16.91■□□□□ 0.3
VPS26A-205ENST00000489656 LCORLQ8N3X6 602 aa16.91■□□□□ 0.3
VPS26A-205ENST00000489656 IPO9Q96P70 1041 aaKnown RBP16.91■□□□□ 0.3
VPS26A-205ENST00000489656 TM6SF1Q9BZW5 370 aa16.91■□□□□ 0.3
VPS26A-205ENST00000489656 TAOK3Q9H2K8 898 aa16.91■□□□□ 0.3
VPS26A-205ENST00000489656 ARMT1Q9H993 441 aa16.91■□□□□ 0.3
VPS26A-205ENST00000489656 BCS1LQ9Y276 419 aa16.91■□□□□ 0.3
VPS26A-205ENST00000489656 MROH7-TTC4A0A0A0MT08 1334 aa16.91■□□□□ 0.3
VPS26A-205ENST00000489656 GAKO14976 1311 aa16.91■□□□□ 0.3
VPS26A-205ENST00000489656 USP17L3A6NCW0 530 aa16.9■□□□□ 0.3
VPS26A-205ENST00000489656 USP17L4A6NCW7 530 aa16.9■□□□□ 0.3
VPS26A-205ENST00000489656 PPP4CP60510 307 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms