RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
LTA-216ENST00000489638 SP3Q02447 781 aa16.4■□□□□ 0.22
LTA-216ENST00000489638 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
LTA-216ENST00000489638 TMEM39BQ9GZU3 492 aa16.4■□□□□ 0.22
LTA-216ENST00000489638 EFCC1Q9HA90 598 aa16.4■□□□□ 0.22
LTA-216ENST00000489638 C9orf78Q9NZ63 289 aaPredicted RBP16.4■□□□□ 0.22
LTA-216ENST00000489638 CRKP46108 304 aa16.39■□□□□ 0.21
LTA-216ENST00000489638 VGLL4Q14135 290 aa16.39■□□□□ 0.21
LTA-216ENST00000489638 GRIK5Q16478 980 aa16.39■□□□□ 0.21
LTA-216ENST00000489638 BRI3BPQ8WY22 251 aa16.39■□□□□ 0.21
LTA-216ENST00000489638 SUCLG2Q96I99 432 aa16.39■□□□□ 0.21
LTA-216ENST00000489638 TCP10L2B9ZVM9 353 aa16.38■□□□□ 0.21
LTA-216ENST00000489638 SLC4A10Q6U841 1118 aa16.38■□□□□ 0.21
LTA-216ENST00000489638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.38■□□□□ 0.21
LTA-216ENST00000489638 GCC1Q96CN9 775 aa16.38■□□□□ 0.21
LTA-216ENST00000489638 SRCIN1Q9C0H9 1055 aa16.38■□□□□ 0.21
LTA-216ENST00000489638 RIPOR2Q9Y4F9 1068 aa16.38■□□□□ 0.21
LTA-216ENST00000489638 KIAA0100Q14667 2235 aaKnown RBP16.38■□□□□ 0.21
LTA-216ENST00000489638 NBPF7P0C2Y1 421 aaPredicted RBP16.38■□□□□ 0.21
LTA-216ENST00000489638 FBXO33Q7Z6M2 555 aa16.38■□□□□ 0.21
LTA-216ENST00000489638 UTYO14607 1347 aa16.37■□□□□ 0.21
LTA-216ENST00000489638 MROH5Q6ZUA9 1318 aa16.37■□□□□ 0.21
LTA-216ENST00000489638 CCL15-CCL14A0A0B4J2E2 113 aa16.37■□□□□ 0.21
LTA-216ENST00000489638 MAP3K9P80192 1104 aa16.37■□□□□ 0.21
LTA-216ENST00000489638 CCL15Q16663 113 aa16.37■□□□□ 0.21
LTA-216ENST00000489638 RABL6Q3YEC7 729 aaPredicted RBP16.37■□□□□ 0.21
LTA-216ENST00000489638 FAM43AQ8N2R8 423 aa16.37■□□□□ 0.21
LTA-216ENST00000489638 IQSEC3Q9UPP2 1182 aaPredicted RBP16.37■□□□□ 0.21
LTA-216ENST00000489638 EN2P19622 333 aaPredicted RBP16.36■□□□□ 0.21
LTA-216ENST00000489638 TNNI2P48788 182 aa16.36■□□□□ 0.21
LTA-216ENST00000489638 GTF2A2P52657 109 aa16.36■□□□□ 0.21
LTA-216ENST00000489638 HDLBPQ00341 1268 aaKnown RBP16.36■□□□□ 0.21
LTA-216ENST00000489638 TAF1CQ15572 869 aaPredicted RBP16.36■□□□□ 0.21
LTA-216ENST00000489638 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
LTA-216ENST00000489638 ZNF333Q96JL9 665 aa16.36■□□□□ 0.21
LTA-216ENST00000489638 BICC1Q9H694 974 aaKnown RBP16.36■□□□□ 0.21
LTA-216ENST00000489638 CSADQ9Y600 493 aa16.36■□□□□ 0.21
LTA-216ENST00000489638 MKI67P46013 3256 aaKnown RBP16.36■□□□□ 0.21
LTA-216ENST00000489638 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
LTA-216ENST00000489638 CACNB3P54284 484 aa16.35■□□□□ 0.21
LTA-216ENST00000489638 CHAF1AQ13111 956 aaPredicted RBP16.35■□□□□ 0.21
LTA-216ENST00000489638 LRRC24Q50LG9 513 aa16.35■□□□□ 0.21
LTA-216ENST00000489638 HABP4Q5JVS0 413 aaKnown RBP16.35■□□□□ 0.21
LTA-216ENST00000489638 ANKRD44Q8N8A2 993 aa16.35■□□□□ 0.21
LTA-216ENST00000489638 VGLL2Q8N8G2 317 aa16.35■□□□□ 0.21
LTA-216ENST00000489638 ZFYVE28Q9HCC9 887 aa16.35■□□□□ 0.21
LTA-216ENST00000489638 SNCAIPQ9Y6H5 919 aa16.35■□□□□ 0.21
LTA-216ENST00000489638 CENPFP49454 3210 aa16.34■□□□□ 0.21
LTA-216ENST00000489638 VPS37DQ86XT2 251 aa16.34■□□□□ 0.21
LTA-216ENST00000489638 TBC1D22AQ8WUA7 517 aa16.34■□□□□ 0.21
LTA-216ENST00000489638 PTCH2Q9Y6C5 1203 aa16.34■□□□□ 0.21
LTA-216ENST00000489638 METTL24Q5JXM2 366 aa16.33■□□□□ 0.2
LTA-216ENST00000489638 TEKT1Q969V4 418 aa16.33■□□□□ 0.2
LTA-216ENST00000489638 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.2
LTA-216ENST00000489638 BRCA2P51587 3418 aa16.32■□□□□ 0.2
LTA-216ENST00000489638 ANP32CO43423 234 aa16.32■□□□□ 0.2
LTA-216ENST00000489638 PDE8BO95263 885 aa16.32■□□□□ 0.2
LTA-216ENST00000489638 SLC9C1Q4G0N8 1177 aa16.32■□□□□ 0.2
LTA-216ENST00000489638 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
LTA-216ENST00000489638 APOBEC3HQ6NTF7 200 aaKnown RBP16.32■□□□□ 0.2
LTA-216ENST00000489638 RPAP1Q9BWH6 1393 aaPredicted RBP16.32■□□□□ 0.2
LTA-216ENST00000489638 ZSWIM8A7E2V4 1837 aa16.32■□□□□ 0.2
LTA-216ENST00000489638 BCAMP50895 628 aa16.31■□□□□ 0.2
LTA-216ENST00000489638 ARHGEF6Q15052 776 aa16.31■□□□□ 0.2
LTA-216ENST00000489638 FKBP1CQ5VVH2 108 aa16.31■□□□□ 0.2
LTA-216ENST00000489638 FAM83AQ86UY5 434 aa16.31■□□□□ 0.2
LTA-216ENST00000489638 ERO1BQ86YB8 467 aa16.31■□□□□ 0.2
LTA-216ENST00000489638 KLHDC4Q8TBB5 520 aa16.31■□□□□ 0.2
LTA-216ENST00000489638 WRNIP1Q96S55 665 aa16.31■□□□□ 0.2
LTA-216ENST00000489638 TMEM106CQ9BVX2 250 aa16.31■□□□□ 0.2
LTA-216ENST00000489638 MRIQ9BWK5 157 aa16.31■□□□□ 0.2
LTA-216ENST00000489638 ZCCHC17Q9NP64 241 aaKnown RBP16.31■□□□□ 0.2
LTA-216ENST00000489638 KIF16BQ96L93 1317 aa16.3■□□□□ 0.2
LTA-216ENST00000489638 BTBD19C9JJ37 291 aa16.3■□□□□ 0.2
LTA-216ENST00000489638 IRF6O14896 467 aa16.3■□□□□ 0.2
LTA-216ENST00000489638 TLR2O60603 784 aa16.3■□□□□ 0.2
LTA-216ENST00000489638 FRAT2O75474 233 aaPredicted RBP16.3■□□□□ 0.2
LTA-216ENST00000489638 CETPP11597 493 aa16.3■□□□□ 0.2
LTA-216ENST00000489638 ZKSCAN4Q969J2 545 aaPredicted RBP16.3■□□□□ 0.2
LTA-216ENST00000489638 ARHGAP39Q9C0H5 1083 aa16.3■□□□□ 0.2
LTA-216ENST00000489638 TMOD2Q9NZR1 351 aa16.3■□□□□ 0.2
LTA-216ENST00000489638 MAST3O60307 1309 aa16.29■□□□□ 0.2
LTA-216ENST00000489638 ZNF521Q96K83 1311 aa16.29■□□□□ 0.2
LTA-216ENST00000489638 PPIL2Q13356 520 aa16.29■□□□□ 0.2
LTA-216ENST00000489638 SNAPC2Q13487 334 aa16.29■□□□□ 0.2
LTA-216ENST00000489638 MRPL50Q8N5N7 158 aaKnown RBP16.29■□□□□ 0.2
LTA-216ENST00000489638 SUGT1Q9Y2Z0 365 aa16.29■□□□□ 0.2
LTA-216ENST00000489638 FGFR2P21802 821 aa16.28■□□□□ 0.2
LTA-216ENST00000489638 LACTBP83111 547 aaPredicted RBP16.28■□□□□ 0.2
LTA-216ENST00000489638 PUM3Q15397 648 aaKnown RBP16.28■□□□□ 0.2
LTA-216ENST00000489638 HHIPL2Q6UWX4 724 aa16.28■□□□□ 0.2
LTA-216ENST00000489638 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
LTA-216ENST00000489638 HOOK2Q96ED9 719 aa16.28■□□□□ 0.2
LTA-216ENST00000489638 WDHD1O75717 1129 aaPredicted RBP16.27■□□□□ 0.2
LTA-216ENST00000489638 DCAF15Q66K64 600 aa16.27■□□□□ 0.2
LTA-216ENST00000489638 SH3TC2Q8TF17 1288 aa16.27■□□□□ 0.2
LTA-216ENST00000489638 PTPRCP08575 1304 aa16.27■□□□□ 0.19
LTA-216ENST00000489638 MYCP01106 439 aaPredicted RBP16.26■□□□□ 0.19
LTA-216ENST00000489638 IFIT1P09914 478 aaKnown RBP16.26■□□□□ 0.19
LTA-216ENST00000489638 INPP5BP32019 993 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms