RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 KLHDC7BQ96G42 594 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 SOX17Q9H6I2 414 aaPredicted RBP5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 CBX8Q9HC52 389 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 SRA1Q9HD15 236 aaKnown RBP5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 ADAMTS8Q9UP79 889 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 CNTNAP5Q8WYK1 1306 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 MINDY4BA8MYZ0 360 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 F6X3S4 739 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 CYP11A1P05108 521 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 NME2P22392 152 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 ARNTP27540 789 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 CD68P34810 354 aaPredicted RBP5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 AP3B2Q13367 1082 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 SUZ12Q15022 739 aaKnown RBP5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 PCNX4Q63HM2 1172 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 USP48Q86UV5 1035 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 SULF2Q8IWU5 870 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 DCAF11Q8TEB1 546 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 RSRP1Q9BUV0 290 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 EMILIN2Q9BXX0 1053 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 COPRSQ9NQ92 184 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 KBTBD4Q9NVX7 518 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 PCDHGB7Q9Y5F8 929 aa5.69□□□□□ -1.5
AC055855.1-201ENST00000489563 A0A0A0MRY4 1105 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 DEAF1O75398 565 aaPredicted RBP5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 BMP6P22004 513 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 LIG3P49916 1009 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 NLRP12P59046 1061 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 LRRC14Q15048 493 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 POU4F3Q15319 338 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 ZNF394Q53GI3 561 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 PRRT3Q5FWE3 981 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 ILDR2Q71H61 639 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 ERMP1Q7Z2K6 904 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 FBXO11Q86XK2 927 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 FMR1NBQ8N0W7 255 aaPredicted RBP5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 GALNT11Q8NCW6 608 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 TMEM74Q96NL1 305 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 CORO1BQ9BR76 489 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 USP26Q9BXU7 913 aa5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 NOP53Q9NZM5 478 aaKnown RBP5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.68□□□□□ -1.5
AC055855.1-201ENST00000489563 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 DDX3YO15523 660 aaKnown RBP5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 MAOBP27338 520 aa5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 ZNF654Q8IZM8 581 aa5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 STK35Q8TDR2 534 aa5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 KCNB2Q92953 911 aa5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 SCARF2Q96GP6 870 aaPredicted RBP5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 ZC3H12CQ9C0D7 883 aaKnown RBP5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 CCSER2Q9H7U1 834 aa5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 DDX41Q9UJV9 622 aaKnown RBP5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 CYP8B1Q9UNU6 501 aa5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 TLR6Q9Y2C9 796 aa5.67□□□□□ -1.5
AC055855.1-201ENST00000489563 FAM181BA6NEQ2 426 aa5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 GSTP1P09211 210 aaKnown RBP5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 RPS26P62854 115 aaKnown RBP5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 RACK1P63244 317 aaKnown RBP5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 RAD51AP2Q09MP3 1159 aa5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 DUOXA2Q1HG44 320 aa5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 FOXD4L6Q3SYB3 417 aaPredicted RBP5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 MAP1SQ66K74 1059 aaPredicted RBP5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 LLGL2Q6P1M3 1020 aa5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 FOXD4L3Q6VB84 417 aaPredicted RBP5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 AGMOQ6ZNB7 445 aa5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 PHC3Q8NDX5 983 aa5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 TGIF2Q9GZN2 237 aa5.66□□□□□ -1.5
AC055855.1-201ENST00000489563 PF4P02776 101 aa5.65□□□□□ -1.5
AC055855.1-201ENST00000489563 EIF4A3P38919 411 aaKnown RBP5.65□□□□□ -1.5
AC055855.1-201ENST00000489563 FAM160A1Q05DH4 1040 aa5.65□□□□□ -1.5
AC055855.1-201ENST00000489563 PDE3AQ14432 1141 aa5.65□□□□□ -1.5
AC055855.1-201ENST00000489563 DIEXFQ68CQ4 756 aaKnown RBP5.65□□□□□ -1.5
AC055855.1-201ENST00000489563 GRIN3AQ8TCU5 1115 aa5.65□□□□□ -1.5
AC055855.1-201ENST00000489563 JARID2Q92833 1246 aaPredicted RBP5.65□□□□□ -1.5
AC055855.1-201ENST00000489563 SPON2Q9BUD6 331 aa5.65□□□□□ -1.5
AC055855.1-201ENST00000489563 MIR1-1HGQ9H1L0 117 aa5.65□□□□□ -1.5
AC055855.1-201ENST00000489563 ACBD3Q9H3P7 528 aa5.65□□□□□ -1.5
AC055855.1-201ENST00000489563 KCNK4Q9NYG8 393 aa5.65□□□□□ -1.5
AC055855.1-201ENST00000489563 DLL1O00548 723 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 TM4SF5O14894 197 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 ADAM11O75078 769 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 ECEL1O95672 775 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 ELNP15502 786 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 TFE3P19532 575 aaPredicted RBP5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 ZC3H6P61129 1189 aaKnown RBP5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 HNRNPUQ00839 825 aaKnown RBP eCLIP5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 LMNB2Q03252 620 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 ZNF252P-AS1Q0IIN9 211 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 CAMK2GQ13555 558 aaPredicted RBP5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 GRIK4Q16099 956 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 SNAP47Q5SQN1 464 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 HP1BP3Q5SSJ5 553 aaPredicted RBP5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 RASIP1Q5U651 963 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 IGF2-ASQ6U949 168 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 PDZD3Q86UT5 571 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 GOLM1Q8NBJ4 401 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 ACSBG1Q96GR2 724 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 NRSN2Q9GZP1 204 aa5.64□□□□□ -1.51
AC055855.1-201ENST00000489563 PCDHB5Q9Y5E4 795 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms