RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 CRHR2Q13324 411 aa12.74□□□□□ -0.37
CSF3R-213ENST00000489551 RABL6Q3YEC7 729 aaPredicted RBP12.74□□□□□ -0.37
CSF3R-213ENST00000489551 SUPT20HL1Q3ZLR7 823 aa12.74□□□□□ -0.37
CSF3R-213ENST00000489551 TAF7LQ5H9L4 462 aa12.74□□□□□ -0.37
CSF3R-213ENST00000489551 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.74□□□□□ -0.37
CSF3R-213ENST00000489551 DZIP1LQ8IYY4 767 aaKnown RBP12.74□□□□□ -0.37
CSF3R-213ENST00000489551 FAM9BQ8IZU0 186 aa12.74□□□□□ -0.37
CSF3R-213ENST00000489551 MRPL50Q8N5N7 158 aaKnown RBP12.74□□□□□ -0.37
CSF3R-213ENST00000489551 VGLL2Q8N8G2 317 aa12.74□□□□□ -0.37
CSF3R-213ENST00000489551 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
CSF3R-213ENST00000489551 TMEM39BQ9GZU3 492 aa12.74□□□□□ -0.37
CSF3R-213ENST00000489551 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
CSF3R-213ENST00000489551 POTEFA5A3E0 1075 aa12.73□□□□□ -0.37
CSF3R-213ENST00000489551 ANP32CO43423 234 aa12.73□□□□□ -0.37
CSF3R-213ENST00000489551 CRKP46108 304 aa12.73□□□□□ -0.37
CSF3R-213ENST00000489551 IREB2P48200 963 aaKnown RBP12.73□□□□□ -0.37
CSF3R-213ENST00000489551 ANKRD13AQ8IZ07 590 aa12.73□□□□□ -0.37
CSF3R-213ENST00000489551 KLHDC4Q8TBB5 520 aa12.73□□□□□ -0.37
CSF3R-213ENST00000489551 CD99L2Q8TCZ2 262 aa12.73□□□□□ -0.37
CSF3R-213ENST00000489551 ELP3Q9H9T3 547 aa12.73□□□□□ -0.37
CSF3R-213ENST00000489551 TRIM17Q9Y577 477 aa12.73□□□□□ -0.37
CSF3R-213ENST00000489551 AK9Q5TCS8 1911 aa12.72□□□□□ -0.37
CSF3R-213ENST00000489551 TCP10L2B9ZVM9 353 aa12.72□□□□□ -0.37
CSF3R-213ENST00000489551 PRPF38BQ5VTL8 546 aaKnown RBP12.72□□□□□ -0.37
CSF3R-213ENST00000489551 OPTNQ96CV9 577 aa12.72□□□□□ -0.37
CSF3R-213ENST00000489551 MROH5Q6ZUA9 1318 aa12.71□□□□□ -0.37
CSF3R-213ENST00000489551 ZNF316A6NFI3 1004 aaPredicted RBP12.71□□□□□ -0.37
CSF3R-213ENST00000489551 CACNB3P54284 484 aa12.71□□□□□ -0.37
CSF3R-213ENST00000489551 BRI3BPQ8WY22 251 aa12.71□□□□□ -0.37
CSF3R-213ENST00000489551 USP44Q9H0E7 712 aa12.71□□□□□ -0.37
CSF3R-213ENST00000489551 PTPN22Q9Y2R2 807 aa12.71□□□□□ -0.37
CSF3R-213ENST00000489551 PDE8BO95263 885 aa12.7□□□□□ -0.38
CSF3R-213ENST00000489551 FGFR2P21802 821 aa12.7□□□□□ -0.38
CSF3R-213ENST00000489551 RFX5P48382 616 aaPredicted RBP12.7□□□□□ -0.38
CSF3R-213ENST00000489551 BCAMP50895 628 aa12.7□□□□□ -0.38
CSF3R-213ENST00000489551 CHAF1AQ13111 956 aaPredicted RBP12.7□□□□□ -0.38
CSF3R-213ENST00000489551 VGLL4Q14135 290 aa12.7□□□□□ -0.38
CSF3R-213ENST00000489551 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSF3R-213ENST00000489551 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
CSF3R-213ENST00000489551 TNFAIP1Q13829 316 aa12.69□□□□□ -0.38
CSF3R-213ENST00000489551 APOBEC3HQ6NTF7 200 aaKnown RBP12.69□□□□□ -0.38
CSF3R-213ENST00000489551 FAM43AQ8N2R8 423 aa12.69□□□□□ -0.38
CSF3R-213ENST00000489551 SSH1Q8WYL5 1049 aa12.69□□□□□ -0.38
CSF3R-213ENST00000489551 MYH2Q9UKX2 1941 aa12.68□□□□□ -0.38
CSF3R-213ENST00000489551 HDLBPQ00341 1268 aaKnown RBP12.68□□□□□ -0.38
CSF3R-213ENST00000489551 SP3Q02447 781 aa12.68□□□□□ -0.38
CSF3R-213ENST00000489551 METTL24Q5JXM2 366 aa12.68□□□□□ -0.38
CSF3R-213ENST00000489551 ERO1AQ96HE7 468 aa12.68□□□□□ -0.38
CSF3R-213ENST00000489551 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
CSF3R-213ENST00000489551 CCL15-CCL14A0A0B4J2E2 113 aa12.67□□□□□ -0.38
CSF3R-213ENST00000489551 CCL15Q16663 113 aa12.67□□□□□ -0.38
CSF3R-213ENST00000489551 ZKSCAN4Q969J2 545 aaPredicted RBP12.67□□□□□ -0.38
CSF3R-213ENST00000489551 ARMC5Q96C12 935 aa12.67□□□□□ -0.38
CSF3R-213ENST00000489551 ZDHHC15Q96MV8 337 aa12.67□□□□□ -0.38
CSF3R-213ENST00000489551 EFCC1Q9HA90 598 aa12.67□□□□□ -0.38
CSF3R-213ENST00000489551 MGAMO43451 1857 aa12.67□□□□□ -0.38
CSF3R-213ENST00000489551 EN2P19622 333 aaPredicted RBP12.66□□□□□ -0.38
CSF3R-213ENST00000489551 OTUD7BQ6GQQ9 843 aa12.66□□□□□ -0.38
CSF3R-213ENST00000489551 ATG9AQ7Z3C6 839 aa12.66□□□□□ -0.38
CSF3R-213ENST00000489551 VPS37DQ86XT2 251 aa12.66□□□□□ -0.38
CSF3R-213ENST00000489551 TBC1D22AQ8WUA7 517 aa12.66□□□□□ -0.38
CSF3R-213ENST00000489551 TEKT1Q969V4 418 aa12.66□□□□□ -0.38
CSF3R-213ENST00000489551 OTUD5Q96G74 571 aa12.66□□□□□ -0.38
CSF3R-213ENST00000489551 MRIQ9BWK5 157 aa12.66□□□□□ -0.38
CSF3R-213ENST00000489551 ARHGAP39Q9C0H5 1083 aa12.66□□□□□ -0.38
CSF3R-213ENST00000489551 PTPRFP10586 1907 aa12.66□□□□□ -0.38
CSF3R-213ENST00000489551 PTPRCP08575 1304 aa12.65□□□□□ -0.38
CSF3R-213ENST00000489551 PHIPQ8WWQ0 1821 aa12.65□□□□□ -0.38
CSF3R-213ENST00000489551 SPDYE5A6NIY4 337 aa12.65□□□□□ -0.38
CSF3R-213ENST00000489551 TNNI2P48788 182 aa12.65□□□□□ -0.38
CSF3R-213ENST00000489551 SLFN5Q08AF3 891 aa12.65□□□□□ -0.38
CSF3R-213ENST00000489551 TAF1CQ15572 869 aaPredicted RBP12.65□□□□□ -0.38
CSF3R-213ENST00000489551 CAVIN4Q5BKX8 364 aa12.65□□□□□ -0.38
CSF3R-213ENST00000489551 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
CSF3R-213ENST00000489551 DOCK2Q92608 1830 aa12.65□□□□□ -0.39
CSF3R-213ENST00000489551 KIF16BQ96L93 1317 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 BTBD19C9JJ37 291 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 EYA2O00167 538 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 IRF6O14896 467 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 FRAT2O75474 233 aaPredicted RBP12.64□□□□□ -0.39
CSF3R-213ENST00000489551 CTGFP29279 349 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 GTF2A2P52657 109 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 FKBP1CQ5VVH2 108 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 INTS3Q68E01 1043 aaKnown RBP12.64□□□□□ -0.39
CSF3R-213ENST00000489551 HHIPL2Q6UWX4 724 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 FAM83AQ86UY5 434 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 ZNF333Q96JL9 665 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 PTCH2Q9Y6C5 1203 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 SZT2Q5T011 3432 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 DOCK3Q8IZD9 2030 aa12.64□□□□□ -0.39
CSF3R-213ENST00000489551 INPP5BP32019 993 aa12.63□□□□□ -0.39
CSF3R-213ENST00000489551 MOGSQ13724 837 aa12.63□□□□□ -0.39
CSF3R-213ENST00000489551 PUM3Q15397 648 aaKnown RBP12.63□□□□□ -0.39
CSF3R-213ENST00000489551 DIXDC1Q155Q3 683 aa12.63□□□□□ -0.39
CSF3R-213ENST00000489551 MIGA2Q7L4E1 593 aa12.63□□□□□ -0.39
CSF3R-213ENST00000489551 ERO1BQ86YB8 467 aa12.63□□□□□ -0.39
CSF3R-213ENST00000489551 WRNIP1Q96S55 665 aa12.63□□□□□ -0.39
CSF3R-213ENST00000489551 ZFYVE28Q9HCC9 887 aa12.63□□□□□ -0.39
CSF3R-213ENST00000489551 SUGT1Q9Y2Z0 365 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms