RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 PHLPP1O60346 1717 aa10.21□□□□□ -0.78
SMC6-209ENST00000489535 SBNO1A3KN83 1393 aa10.2□□□□□ -0.78
SMC6-209ENST00000489535 U2AF1L5P0DN76 240 aaPredicted RBP10.2□□□□□ -0.78
SMC6-209ENST00000489535 U2AF1Q01081 240 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMC6-209ENST00000489535 MBTPS1Q14703 1052 aa10.2□□□□□ -0.78
SMC6-209ENST00000489535 MTFR1Q15390 333 aa10.2□□□□□ -0.78
SMC6-209ENST00000489535 TNFRSF25Q93038 417 aa10.2□□□□□ -0.78
SMC6-209ENST00000489535 RUNDC1Q96C34 613 aa10.2□□□□□ -0.78
SMC6-209ENST00000489535 CAMTA1Q9Y6Y1 1673 aa10.19□□□□□ -0.78
SMC6-209ENST00000489535 C9orf172C9J069 976 aa10.19□□□□□ -0.78
SMC6-209ENST00000489535 TNS3Q68CZ2 1445 aa10.18□□□□□ -0.78
SMC6-209ENST00000489535 FLT4P35916 1363 aa10.18□□□□□ -0.78
SMC6-209ENST00000489535 MAP3K19Q56UN5 1328 aa10.18□□□□□ -0.78
SMC6-209ENST00000489535 NPHP3Q7Z494 1330 aa10.18□□□□□ -0.78
SMC6-209ENST00000489535 CDK2AP1O14519 115 aa10.18□□□□□ -0.78
SMC6-209ENST00000489535 APAF1O14727 1248 aa10.18□□□□□ -0.78
SMC6-209ENST00000489535 SELPP16109 830 aa10.18□□□□□ -0.78
SMC6-209ENST00000489535 BANK1Q8NDB2 785 aa10.18□□□□□ -0.78
SMC6-209ENST00000489535 DDX17Q92841 729 aaKnown RBP10.18□□□□□ -0.78
SMC6-209ENST00000489535 SLC4A9Q96Q91 983 aa10.18□□□□□ -0.78
SMC6-209ENST00000489535 IL13P35225 146 aa10.17□□□□□ -0.78
SMC6-209ENST00000489535 SLFNL1Q499Z3 407 aa10.17□□□□□ -0.78
SMC6-209ENST00000489535 C20orf204Q6ZNR8 217 aa10.17□□□□□ -0.78
SMC6-209ENST00000489535 SERTAD1Q9UHV2 236 aa10.17□□□□□ -0.78
SMC6-209ENST00000489535 GTF3C3Q9Y5Q9 886 aa10.17□□□□□ -0.78
SMC6-209ENST00000489535 RTL1A6NKG5 1358 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 KIF24Q5T7B8 1368 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 MAPK8IP3Q9UPT6 1336 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 A6NJY4 79 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 TMEM229AB2RXF0 380 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 AMPHP49418 695 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 PDE3BQ13370 1112 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 BICDL1Q6ZP65 573 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 BRINP3Q76B58 766 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 TXNRD3Q86VQ6 643 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 SLC30A3Q99726 388 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 PNNQ9H307 717 aaKnown RBP10.16□□□□□ -0.78
SMC6-209ENST00000489535 SLAIN2Q9P270 581 aa10.16□□□□□ -0.78
SMC6-209ENST00000489535 AHDC1Q5TGY3 1603 aaPredicted RBP10.15□□□□□ -0.78
SMC6-209ENST00000489535 USP19O94966 1318 aa10.15□□□□□ -0.78
SMC6-209ENST00000489535 TXLNAP40222 546 aa10.15□□□□□ -0.78
SMC6-209ENST00000489535 EIF4A2Q14240 407 aaKnown RBP10.15□□□□□ -0.78
SMC6-209ENST00000489535 HSP90AB2PQ58FF8 381 aa10.15□□□□□ -0.78
SMC6-209ENST00000489535 TCP11L2Q8N4U5 519 aa10.15□□□□□ -0.78
SMC6-209ENST00000489535 NGEFQ8N5V2 710 aa10.15□□□□□ -0.78
SMC6-209ENST00000489535 KCNH5Q8NCM2 988 aa10.15□□□□□ -0.78
SMC6-209ENST00000489535 COL22A1Q8NFW1 1626 aaPredicted RBP10.15□□□□□ -0.79
SMC6-209ENST00000489535 ZNF521Q96K83 1311 aa10.14□□□□□ -0.79
SMC6-209ENST00000489535 ZBTB7CA1YPR0 619 aa10.14□□□□□ -0.79
SMC6-209ENST00000489535 HMOX1P09601 288 aa10.14□□□□□ -0.79
SMC6-209ENST00000489535 HOXC9P31274 260 aa10.14□□□□□ -0.79
SMC6-209ENST00000489535 ADH7P40394 386 aa10.14□□□□□ -0.79
SMC6-209ENST00000489535 NEUROD2Q15784 382 aa10.14□□□□□ -0.79
SMC6-209ENST00000489535 MCTP1Q6DN14 999 aa10.14□□□□□ -0.79
SMC6-209ENST00000489535 PLEKHF1Q96S99 279 aa10.14□□□□□ -0.79
SMC6-209ENST00000489535 RRP7AQ9Y3A4 280 aaKnown RBP10.14□□□□□ -0.79
SMC6-209ENST00000489535 PARP3Q9Y6F1 533 aa10.14□□□□□ -0.79
SMC6-209ENST00000489535 LMO7Q8WWI1 1683 aa10.14□□□□□ -0.79
SMC6-209ENST00000489535 ARHGEF10O15013 1369 aa10.14□□□□□ -0.79
SMC6-209ENST00000489535 ABCC6O95255 1503 aa10.13□□□□□ -0.79
SMC6-209ENST00000489535 SPATA31A3Q5VYP0 1347 aa10.13□□□□□ -0.79
SMC6-209ENST00000489535 WNK3Q9BYP7 1800 aa10.13□□□□□ -0.79
SMC6-209ENST00000489535 NEFMP07197 916 aa10.13□□□□□ -0.79
SMC6-209ENST00000489535 PRKAR2BP31323 418 aa10.13□□□□□ -0.79
SMC6-209ENST00000489535 SFSWAPQ12872 951 aaKnown RBP10.13□□□□□ -0.79
SMC6-209ENST00000489535 SSBP4Q9BWG4 385 aaPredicted RBP10.13□□□□□ -0.79
SMC6-209ENST00000489535 COL16A1Q07092 1604 aaPredicted RBP10.12□□□□□ -0.79
SMC6-209ENST00000489535 GCP02774 474 aa10.12□□□□□ -0.79
SMC6-209ENST00000489535 ELNP15502 786 aa10.12□□□□□ -0.79
SMC6-209ENST00000489535 TRAPPC3LQ5T215 181 aa10.12□□□□□ -0.79
SMC6-209ENST00000489535 TP53INP1Q96A56 240 aa10.12□□□□□ -0.79
SMC6-209ENST00000489535 LENG1Q96BZ8 264 aaPredicted RBP10.12□□□□□ -0.79
SMC6-209ENST00000489535 SNRKQ9NRH2 765 aa10.12□□□□□ -0.79
SMC6-209ENST00000489535 PARP4Q9UKK3 1724 aaKnown RBP10.12□□□□□ -0.79
SMC6-209ENST00000489535 PLCH1Q4KWH8 1693 aa10.12□□□□□ -0.79
SMC6-209ENST00000489535 SCN11AQ9UI33 1791 aa10.11□□□□□ -0.79
SMC6-209ENST00000489535 A0A0A0MRY4 1105 aa10.11□□□□□ -0.79
SMC6-209ENST00000489535 TMPOP42166 694 aaKnown RBP10.11□□□□□ -0.79
SMC6-209ENST00000489535 LRRC69Q6ZNQ3 347 aa10.11□□□□□ -0.79
SMC6-209ENST00000489535 ZDHHC1Q8WTX9 485 aa10.11□□□□□ -0.79
SMC6-209ENST00000489535 IP6K1Q92551 441 aa10.11□□□□□ -0.79
SMC6-209ENST00000489535 SUPT16HQ9Y5B9 1047 aaKnown RBP10.11□□□□□ -0.79
SMC6-209ENST00000489535 CACNA1FO60840 1977 aa10.11□□□□□ -0.79
SMC6-209ENST00000489535 LRRC37A3O60309 1634 aa10.11□□□□□ -0.79
SMC6-209ENST00000489535 NEFLP07196 543 aa10.1□□□□□ -0.79
SMC6-209ENST00000489535 CCDC27Q2M243 656 aa10.1□□□□□ -0.79
SMC6-209ENST00000489535 SULT6B1Q6IMI4 303 aa10.1□□□□□ -0.79
SMC6-209ENST00000489535 SHISA2Q6UWI4 295 aa10.1□□□□□ -0.79
SMC6-209ENST00000489535 AEBP1Q8IUX7 1158 aa10.1□□□□□ -0.79
SMC6-209ENST00000489535 WWC1Q8IX03 1113 aa10.1□□□□□ -0.79
SMC6-209ENST00000489535 LTV1Q96GA3 475 aaPredicted RBP10.1□□□□□ -0.79
SMC6-209ENST00000489535 SIPA1L3O60292 1781 aaPredicted RBP10.1□□□□□ -0.79
SMC6-209ENST00000489535 COL14A1Q05707 1796 aaKnown RBP10.1□□□□□ -0.79
SMC6-209ENST00000489535 PKD1L3Q7Z443 1732 aa10.1□□□□□ -0.79
SMC6-209ENST00000489535 IGSF1Q8N6C5 1336 aa10.09□□□□□ -0.79
SMC6-209ENST00000489535 APBB1O00213 710 aa10.09□□□□□ -0.79
SMC6-209ENST00000489535 RIPK4P57078 832 aa10.09□□□□□ -0.79
SMC6-209ENST00000489535 NRG1Q02297 640 aaPredicted RBP10.09□□□□□ -0.79
SMC6-209ENST00000489535 SLFN5Q08AF3 891 aa10.09□□□□□ -0.79
SMC6-209ENST00000489535 NFE2L2Q16236 605 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms