RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 HUNKP57058 714 aa16.48■□□□□ 0.23
CCL28-202ENST00000489442 GRIK5Q16478 980 aa16.48■□□□□ 0.23
CCL28-202ENST00000489442 PRAMEF18Q5VWM3 479 aa16.48■□□□□ 0.23
CCL28-202ENST00000489442 RPAP2Q8IXW5 612 aaPredicted RBP16.48■□□□□ 0.23
CCL28-202ENST00000489442 TEKT1Q969V4 418 aa16.48■□□□□ 0.23
CCL28-202ENST00000489442 NOP58Q9Y2X3 529 aaKnown RBP16.48■□□□□ 0.23
CCL28-202ENST00000489442 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
CCL28-202ENST00000489442 HDLBPQ00341 1268 aaKnown RBP16.47■□□□□ 0.23
CCL28-202ENST00000489442 CYP4F22Q6NT55 531 aa16.47■□□□□ 0.23
CCL28-202ENST00000489442 CAPNS2Q96L46 248 aa16.47■□□□□ 0.23
CCL28-202ENST00000489442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.47■□□□□ 0.23
CCL28-202ENST00000489442 LDHBP07195 334 aaKnown RBP16.46■□□□□ 0.23
CCL28-202ENST00000489442 TTLL12Q14166 644 aaPredicted RBP16.46■□□□□ 0.23
CCL28-202ENST00000489442 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.23
CCL28-202ENST00000489442 TNNI3KQ59H18 835 aa16.46■□□□□ 0.23
CCL28-202ENST00000489442 ERC1Q8IUD2 1116 aa16.46■□□□□ 0.23
CCL28-202ENST00000489442 ZGPATQ8N5A5 531 aaKnown RBP16.46■□□□□ 0.23
CCL28-202ENST00000489442 DEFB129Q9H1M3 183 aa16.46■□□□□ 0.23
CCL28-202ENST00000489442 TDRD3Q9H7E2 651 aaKnown RBP16.46■□□□□ 0.23
CCL28-202ENST00000489442 GPR108Q9NPR9 543 aa16.46■□□□□ 0.23
CCL28-202ENST00000489442 EXOC6BQ9Y2D4 811 aa16.46■□□□□ 0.23
CCL28-202ENST00000489442 FPGT-TNNI3KV9GXZ4 949 aa16.46■□□□□ 0.23
CCL28-202ENST00000489442 TNFAIP1Q13829 316 aa16.45■□□□□ 0.22
CCL28-202ENST00000489442 RASGRF1Q13972 1273 aa16.45■□□□□ 0.22
CCL28-202ENST00000489442 CCDC158Q5M9N0 1113 aa16.45■□□□□ 0.22
CCL28-202ENST00000489442 HHIPL1Q96JK4 782 aa16.45■□□□□ 0.22
CCL28-202ENST00000489442 MRIQ9BWK5 157 aa16.45■□□□□ 0.22
CCL28-202ENST00000489442 ABCF2Q9UG63 623 aa16.45■□□□□ 0.22
CCL28-202ENST00000489442 UQCRFS1P1P0C7P4 283 aa16.45■□□□□ 0.22
CCL28-202ENST00000489442 FKBP1BP68106 108 aa16.45■□□□□ 0.22
CCL28-202ENST00000489442 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
CCL28-202ENST00000489442 SPTY2D1Q68D10 685 aaPredicted RBP16.45■□□□□ 0.22
CCL28-202ENST00000489442 TMOD2Q9NZR1 351 aa16.45■□□□□ 0.22
CCL28-202ENST00000489442 ZNF70Q9UC06 446 aaPredicted RBP16.45■□□□□ 0.22
CCL28-202ENST00000489442 COL1A1P02452 1464 aaPredicted RBP16.44■□□□□ 0.22
CCL28-202ENST00000489442 MYH2Q9UKX2 1941 aa16.44■□□□□ 0.22
CCL28-202ENST00000489442 SALL1Q9NSC2 1324 aa16.44■□□□□ 0.22
CCL28-202ENST00000489442 APBB1O00213 710 aa16.44■□□□□ 0.22
CCL28-202ENST00000489442 PRDX5P30044 214 aa16.44■□□□□ 0.22
CCL28-202ENST00000489442 TNNI2P48788 182 aa16.44■□□□□ 0.22
CCL28-202ENST00000489442 ZNF157P51786 506 aaPredicted RBP16.44■□□□□ 0.22
CCL28-202ENST00000489442 RRP1P56182 461 aaKnown RBP16.44■□□□□ 0.22
CCL28-202ENST00000489442 SPDYE2Q495Y8 402 aa16.44■□□□□ 0.22
CCL28-202ENST00000489442 HHIPL2Q6UWX4 724 aa16.44■□□□□ 0.22
CCL28-202ENST00000489442 ZDHHC15Q96MV8 337 aa16.44■□□□□ 0.22
CCL28-202ENST00000489442 BCL11AQ9H165 835 aa16.44■□□□□ 0.22
CCL28-202ENST00000489442 PPP2R3BQ9Y5P8 575 aa16.44■□□□□ 0.22
CCL28-202ENST00000489442 AOX1Q06278 1338 aa16.43■□□□□ 0.22
CCL28-202ENST00000489442 PDS5AQ29RF7 1337 aaKnown RBP16.43■□□□□ 0.22
CCL28-202ENST00000489442 TCP10L2B9ZVM9 353 aa16.43■□□□□ 0.22
CCL28-202ENST00000489442 ZBTB22O15209 634 aa16.43■□□□□ 0.22
CCL28-202ENST00000489442 PRKG1Q13976 671 aa16.43■□□□□ 0.22
CCL28-202ENST00000489442 RASA3Q14644 834 aa16.43■□□□□ 0.22
CCL28-202ENST00000489442 SUPT20HL1Q3ZLR7 823 aa16.43■□□□□ 0.22
CCL28-202ENST00000489442 RGMBQ6NW40 437 aa16.43■□□□□ 0.22
CCL28-202ENST00000489442 DZIP1Q86YF9 867 aaKnown RBP16.43■□□□□ 0.22
CCL28-202ENST00000489442 SPATA5Q8NB90 893 aa16.43■□□□□ 0.22
CCL28-202ENST00000489442 DBNDD2Q9BQY9 259 aa16.43■□□□□ 0.22
CCL28-202ENST00000489442 CCDC8Q9H0W5 538 aaPredicted RBP16.43■□□□□ 0.22
CCL28-202ENST00000489442 AK9Q5TCS8 1911 aa16.42■□□□□ 0.22
CCL28-202ENST00000489442 HSPA1AP0DMV8 641 aaKnown RBP16.42■□□□□ 0.22
CCL28-202ENST00000489442 HSPA1BP0DMV9 641 aaKnown RBP16.42■□□□□ 0.22
CCL28-202ENST00000489442 ARID4AP29374 1257 aaPredicted RBP16.42■□□□□ 0.22
CCL28-202ENST00000489442 MAP2K1Q02750 393 aaPredicted RBP16.42■□□□□ 0.22
CCL28-202ENST00000489442 DIXDC1Q155Q3 683 aa16.42■□□□□ 0.22
CCL28-202ENST00000489442 ERICH6Q7L0X2 663 aa16.42■□□□□ 0.22
CCL28-202ENST00000489442 ARMC9Q7Z3E5 817 aa16.42■□□□□ 0.22
CCL28-202ENST00000489442 SLF2Q8IX21 1173 aa16.42■□□□□ 0.22
CCL28-202ENST00000489442 CCDC102AQ96A19 550 aa16.42■□□□□ 0.22
CCL28-202ENST00000489442 AIDAQ96BJ3 306 aa16.42■□□□□ 0.22
CCL28-202ENST00000489442 HMG20BQ9P0W2 317 aa16.42■□□□□ 0.22
CCL28-202ENST00000489442 PAPPA2Q9BXP8 1791 aa16.42■□□□□ 0.22
CCL28-202ENST00000489442 UBE2Q2LH0YL09 131 aa16.41■□□□□ 0.22
CCL28-202ENST00000489442 PPP1R12BO60237 982 aaPredicted RBP16.41■□□□□ 0.22
CCL28-202ENST00000489442 MAP2K2P36507 400 aa16.41■□□□□ 0.22
CCL28-202ENST00000489442 MOB2Q70IA6 237 aa16.41■□□□□ 0.22
CCL28-202ENST00000489442 AACSQ86V21 672 aa16.41■□□□□ 0.22
CCL28-202ENST00000489442 SIRT2Q8IXJ6 389 aa16.41■□□□□ 0.22
CCL28-202ENST00000489442 RHPN1Q8TCX5 695 aa16.41■□□□□ 0.22
CCL28-202ENST00000489442 EAF2Q96CJ1 260 aaPredicted RBP16.41■□□□□ 0.22
CCL28-202ENST00000489442 BEGAINQ9BUH8 593 aa16.41■□□□□ 0.22
CCL28-202ENST00000489442 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
CCL28-202ENST00000489442 AOC2O75106 756 aa16.4■□□□□ 0.22
CCL28-202ENST00000489442 RAB11FIP3O75154 756 aa16.4■□□□□ 0.22
CCL28-202ENST00000489442 MCAMP43121 646 aa16.4■□□□□ 0.22
CCL28-202ENST00000489442 CACNB3P54284 484 aa16.4■□□□□ 0.22
CCL28-202ENST00000489442 NOGQ13253 232 aa16.4■□□□□ 0.22
CCL28-202ENST00000489442 APOBEC3HQ6NTF7 200 aaKnown RBP16.4■□□□□ 0.22
CCL28-202ENST00000489442 PI16Q6UXB8 463 aa16.4■□□□□ 0.22
CCL28-202ENST00000489442 CLASRPQ8N2M8 674 aaKnown RBP16.4■□□□□ 0.22
CCL28-202ENST00000489442 KIF1BPQ96EK5 621 aa16.4■□□□□ 0.22
CCL28-202ENST00000489442 SNRKQ9NRH2 765 aa16.4■□□□□ 0.22
CCL28-202ENST00000489442 RAI14Q9P0K7 980 aa16.4■□□□□ 0.22
CCL28-202ENST00000489442 LRP2BPQ9P2M1 347 aa16.4■□□□□ 0.22
CCL28-202ENST00000489442 ANGEL1Q9UNK9 670 aaKnown RBP16.4■□□□□ 0.22
CCL28-202ENST00000489442 DAGLAQ9Y4D2 1042 aa16.4■□□□□ 0.22
CCL28-202ENST00000489442 NBPF12Q5TAG4 269 aaPredicted RBP16.39■□□□□ 0.21
CCL28-202ENST00000489442 TBC1D9Q6ZT07 1266 aa16.39■□□□□ 0.21
CCL28-202ENST00000489442 DBNLQ9UJU6 430 aaKnown RBP16.39■□□□□ 0.21
CCL28-202ENST00000489442 IFIT2P09913 472 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms