RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 LAMB1P07942 1786 aa14.99□□□□□ -0.01
SFXN3-207ENST00000489434 TCP10L2B9ZVM9 353 aa14.99□□□□□ -0.01
SFXN3-207ENST00000489434 WDHD1O75717 1129 aaPredicted RBP14.99□□□□□ -0.01
SFXN3-207ENST00000489434 CRKP46108 304 aa14.99□□□□□ -0.01
SFXN3-207ENST00000489434 HDLBPQ00341 1268 aaKnown RBP14.99□□□□□ -0.01
SFXN3-207ENST00000489434 CHAF1AQ13111 956 aaPredicted RBP14.99□□□□□ -0.01
SFXN3-207ENST00000489434 OPTNQ96CV9 577 aa14.99□□□□□ -0.01
SFXN3-207ENST00000489434 BICC1Q9H694 974 aaKnown RBP14.99□□□□□ -0.01
SFXN3-207ENST00000489434 ELP3Q9H9T3 547 aa14.99□□□□□ -0.01
SFXN3-207ENST00000489434 TMOD2Q9NZR1 351 aa14.99□□□□□ -0.01
SFXN3-207ENST00000489434 PCDH10Q9P2E7 1040 aa14.99□□□□□ -0.01
SFXN3-207ENST00000489434 HTTP42858 3142 aa14.98□□□□□ -0.01
SFXN3-207ENST00000489434 ZNF316A6NFI3 1004 aaPredicted RBP14.98□□□□□ -0.01
SFXN3-207ENST00000489434 MAP3K9P80192 1104 aa14.98□□□□□ -0.01
SFXN3-207ENST00000489434 SP3Q02447 781 aa14.98□□□□□ -0.01
SFXN3-207ENST00000489434 FBXO33Q7Z6M2 555 aa14.98□□□□□ -0.01
SFXN3-207ENST00000489434 TEKT1Q969V4 418 aa14.98□□□□□ -0.01
SFXN3-207ENST00000489434 HOOK2Q96ED9 719 aa14.98□□□□□ -0.01
SFXN3-207ENST00000489434 KAZALD1Q96I82 304 aa14.98□□□□□ -0.01
SFXN3-207ENST00000489434 EFCC1Q9HA90 598 aa14.98□□□□□ -0.01
SFXN3-207ENST00000489434 ARAP2Q8WZ64 1704 aa14.97□□□□□ -0.01
SFXN3-207ENST00000489434 PTPRCP08575 1304 aa14.97□□□□□ -0.01
SFXN3-207ENST00000489434 TESPA1A2RU30 521 aaPredicted RBP14.97□□□□□ -0.01
SFXN3-207ENST00000489434 PDE8BO95263 885 aa14.97□□□□□ -0.01
SFXN3-207ENST00000489434 GJA5P36382 358 aa14.97□□□□□ -0.01
SFXN3-207ENST00000489434 GTF2A2P52657 109 aa14.97□□□□□ -0.01
SFXN3-207ENST00000489434 RABL6Q3YEC7 729 aaPredicted RBP14.97□□□□□ -0.01
SFXN3-207ENST00000489434 TMEM39BQ9GZU3 492 aa14.97□□□□□ -0.01
SFXN3-207ENST00000489434 IQSEC3Q9UPP2 1182 aaPredicted RBP14.97□□□□□ -0.01
SFXN3-207ENST00000489434 MAST3O60307 1309 aa14.96□□□□□ -0.01
SFXN3-207ENST00000489434 IFIT1P09914 478 aaKnown RBP14.96□□□□□ -0.01
SFXN3-207ENST00000489434 VGLL4Q14135 290 aa14.96□□□□□ -0.01
SFXN3-207ENST00000489434 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.96□□□□□ -0.01
SFXN3-207ENST00000489434 CD99L2Q8TCZ2 262 aa14.96□□□□□ -0.01
SFXN3-207ENST00000489434 TEPSINQ96N21 525 aa14.96□□□□□ -0.01
SFXN3-207ENST00000489434 ZFYVE28Q9HCC9 887 aa14.96□□□□□ -0.01
SFXN3-207ENST00000489434 PTPN22Q9Y2R2 807 aa14.96□□□□□ -0.01
SFXN3-207ENST00000489434 SUGT1Q9Y2Z0 365 aa14.96□□□□□ -0.01
SFXN3-207ENST00000489434 OTOFQ9HC10 1997 aa14.96□□□□□ -0.01
SFXN3-207ENST00000489434 CCL15-CCL14A0A0B4J2E2 113 aa14.95□□□□□ -0.02
SFXN3-207ENST00000489434 PUM3Q15397 648 aaKnown RBP14.95□□□□□ -0.02
SFXN3-207ENST00000489434 TAF1CQ15572 869 aaPredicted RBP14.95□□□□□ -0.02
SFXN3-207ENST00000489434 CCL15Q16663 113 aa14.95□□□□□ -0.02
SFXN3-207ENST00000489434 LRRC24Q50LG9 513 aa14.95□□□□□ -0.02
SFXN3-207ENST00000489434 ANKRD44Q8N8A2 993 aa14.95□□□□□ -0.02
SFXN3-207ENST00000489434 MS4A4AQ96JQ5 239 aa14.95□□□□□ -0.02
SFXN3-207ENST00000489434 PTPN18Q99952 460 aa14.95□□□□□ -0.02
SFXN3-207ENST00000489434 MRIQ9BWK5 157 aa14.95□□□□□ -0.02
SFXN3-207ENST00000489434 CENPFP49454 3210 aa14.95□□□□□ -0.02
SFXN3-207ENST00000489434 KIF16BQ96L93 1317 aa14.94□□□□□ -0.02
SFXN3-207ENST00000489434 FKBP1CQ5VVH2 108 aa14.94□□□□□ -0.02
SFXN3-207ENST00000489434 MRPL50Q8N5N7 158 aaKnown RBP14.94□□□□□ -0.02
SFXN3-207ENST00000489434 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.94□□□□□ -0.02
SFXN3-207ENST00000489434 GCC1Q96CN9 775 aa14.94□□□□□ -0.02
SFXN3-207ENST00000489434 OTUD5Q96G74 571 aa14.94□□□□□ -0.02
SFXN3-207ENST00000489434 ZDHHC15Q96MV8 337 aa14.94□□□□□ -0.02
SFXN3-207ENST00000489434 E9PSI1 815 aa14.93□□□□□ -0.02
SFXN3-207ENST00000489434 CETPP11597 493 aa14.93□□□□□ -0.02
SFXN3-207ENST00000489434 BCAMP50895 628 aa14.93□□□□□ -0.02
SFXN3-207ENST00000489434 DCAF15Q66K64 600 aa14.93□□□□□ -0.02
SFXN3-207ENST00000489434 NBPF11Q86T75 865 aa14.93□□□□□ -0.02
SFXN3-207ENST00000489434 FAM83AQ86UY5 434 aa14.93□□□□□ -0.02
SFXN3-207ENST00000489434 CDAN1Q8IWY9 1227 aa14.93□□□□□ -0.02
SFXN3-207ENST00000489434 VGLL2Q8N8G2 317 aa14.93□□□□□ -0.02
SFXN3-207ENST00000489434 BRI3BPQ8WY22 251 aa14.93□□□□□ -0.02
SFXN3-207ENST00000489434 ARMC5Q96C12 935 aa14.93□□□□□ -0.02
SFXN3-207ENST00000489434 TMEM106CQ9BVX2 250 aa14.93□□□□□ -0.02
SFXN3-207ENST00000489434 SPDYE5A6NIY4 337 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 SLC5A1P13866 664 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 CACNB3P54284 484 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 KIF22Q14807 665 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 GRIK5Q16478 980 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 HHIPL2Q6UWX4 724 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 ERO1BQ86YB8 467 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 WDR66Q8TBY9 1149 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 WRNIP1Q96S55 665 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 USP44Q9H0E7 712 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 ZCCHC17Q9NP64 241 aaKnown RBP14.92□□□□□ -0.02
SFXN3-207ENST00000489434 ZNF521Q96K83 1311 aa14.92□□□□□ -0.02
SFXN3-207ENST00000489434 SNAPC2Q13487 334 aa14.91□□□□□ -0.02
SFXN3-207ENST00000489434 SLC9C1Q4G0N8 1177 aa14.91□□□□□ -0.02
SFXN3-207ENST00000489434 KLHDC4Q8TBB5 520 aa14.91□□□□□ -0.02
SFXN3-207ENST00000489434 SSH1Q8WYL5 1049 aa14.91□□□□□ -0.02
SFXN3-207ENST00000489434 GNL3LQ9NVN8 582 aaKnown RBP14.91□□□□□ -0.02
SFXN3-207ENST00000489434 MKI67P46013 3256 aaKnown RBP14.9□□□□□ -0.02
SFXN3-207ENST00000489434 POTEFA5A3E0 1075 aa14.9□□□□□ -0.02
SFXN3-207ENST00000489434 EYA2O00167 538 aa14.9□□□□□ -0.02
SFXN3-207ENST00000489434 APOBEC3HQ6NTF7 200 aaKnown RBP14.9□□□□□ -0.02
SFXN3-207ENST00000489434 LPIN2Q92539 896 aa14.9□□□□□ -0.02
SFXN3-207ENST00000489434 ZNF341Q9BYN7 854 aa14.9□□□□□ -0.02
SFXN3-207ENST00000489434 HDAC5Q9UQL6 1122 aa14.9□□□□□ -0.02
SFXN3-207ENST00000489434 AK9Q5TCS8 1911 aa14.9□□□□□ -0.02
SFXN3-207ENST00000489434 MYH13Q9UKX3 1938 aa14.9□□□□□ -0.02
SFXN3-207ENST00000489434 RBBP6Q7Z6E9 1792 aaKnown RBP14.89□□□□□ -0.03
SFXN3-207ENST00000489434 FGFR2P21802 821 aa14.89□□□□□ -0.03
SFXN3-207ENST00000489434 PPIL2Q13356 520 aa14.89□□□□□ -0.03
SFXN3-207ENST00000489434 ALDH1L2Q3SY69 923 aa14.89□□□□□ -0.03
SFXN3-207ENST00000489434 FAM43AQ8N2R8 423 aa14.89□□□□□ -0.03
SFXN3-207ENST00000489434 ZKSCAN4Q969J2 545 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms