RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 AIDAQ96BJ3 306 aa25.02■■□□□ 1.6
SND1-214ENST00000489417 DDRGK1Q96HY6 314 aa25.02■■□□□ 1.6
SND1-214ENST00000489417 DBNDD1Q9H9R9 158 aa25.02■■□□□ 1.6
SND1-214ENST00000489417 U3KPZ7 1027 aaPredicted RBP25.02■■□□□ 1.6
SND1-214ENST00000489417 PPIP5K2O43314 1243 aa25.01■■□□□ 1.59
SND1-214ENST00000489417 ECE2O60344 883 aa25.01■■□□□ 1.59
SND1-214ENST00000489417 HSPD1P10809 573 aaKnown RBP25.01■■□□□ 1.59
SND1-214ENST00000489417 NECTIN1Q15223 517 aa25.01■■□□□ 1.59
SND1-214ENST00000489417 VPS53Q5VIR6 699 aa25.01■■□□□ 1.59
SND1-214ENST00000489417 ZNF384Q8TF68 577 aa25.01■■□□□ 1.59
SND1-214ENST00000489417 MBD4O95243 580 aa25■■□□□ 1.59
SND1-214ENST00000489417 MFSD14BQ5SR56 506 aa25■■□□□ 1.59
SND1-214ENST00000489417 FBXW7Q969H0 707 aa25■■□□□ 1.59
SND1-214ENST00000489417 IL17RAQ96F46 866 aa25■■□□□ 1.59
SND1-214ENST00000489417 BCS1LQ9Y276 419 aa25■■□□□ 1.59
SND1-214ENST00000489417 GRIK5Q16478 980 aa24.99■■□□□ 1.59
SND1-214ENST00000489417 ADGRA1Q86SQ6 560 aa24.99■■□□□ 1.59
SND1-214ENST00000489417 KCNB2Q92953 911 aa24.99■■□□□ 1.59
SND1-214ENST00000489417 STRBPQ96SI9 672 aaKnown RBP24.99■■□□□ 1.59
SND1-214ENST00000489417 VPS33BQ9H267 617 aa24.99■■□□□ 1.59
SND1-214ENST00000489417 CHD4Q14839 1912 aa24.98■■□□□ 1.59
SND1-214ENST00000489417 CCDC88AQ3V6T2 1871 aa24.98■■□□□ 1.59
SND1-214ENST00000489417 GSTO1P78417 241 aa24.98■■□□□ 1.59
SND1-214ENST00000489417 RABEP1Q15276 862 aa24.98■■□□□ 1.59
SND1-214ENST00000489417 CREB3L3Q68CJ9 461 aa24.98■■□□□ 1.59
SND1-214ENST00000489417 TTLL5Q6EMB2 1281 aa24.98■■□□□ 1.59
SND1-214ENST00000489417 SNX14Q9Y5W7 946 aa24.98■■□□□ 1.59
SND1-214ENST00000489417 MAGEB6P1A0A0J9YX57 407 aa24.97■■□□□ 1.59
SND1-214ENST00000489417 SLC27A2O14975 620 aa24.97■■□□□ 1.59
SND1-214ENST00000489417 RNF20Q5VTR2 975 aa24.97■■□□□ 1.59
SND1-214ENST00000489417 MIGA1Q8NAN2 632 aa24.97■■□□□ 1.59
SND1-214ENST00000489417 ARMT1Q9H993 441 aa24.97■■□□□ 1.59
SND1-214ENST00000489417 ZNF277Q9NRM2 450 aaPredicted RBP24.97■■□□□ 1.59
SND1-214ENST00000489417 FOXP2O15409 715 aa24.96■■□□□ 1.59
SND1-214ENST00000489417 RASEFQ8IZ41 740 aa24.96■■□□□ 1.59
SND1-214ENST00000489417 LCORLQ8N3X6 602 aa24.96■■□□□ 1.59
SND1-214ENST00000489417 FHDC1Q9C0D6 1143 aaPredicted RBP24.96■■□□□ 1.59
SND1-214ENST00000489417 SUGT1Q9Y2Z0 365 aa24.96■■□□□ 1.59
SND1-214ENST00000489417 GNAT2P19087 354 aa24.95■■□□□ 1.59
SND1-214ENST00000489417 LARGE2Q8N3Y3 721 aa24.95■■□□□ 1.59
SND1-214ENST00000489417 LDHCP07864 332 aa24.95■■□□□ 1.58
SND1-214ENST00000489417 ZKSCAN1P17029 563 aaPredicted RBP24.95■■□□□ 1.58
SND1-214ENST00000489417 FER1L6Q2WGJ9 1857 aa24.95■■□□□ 1.58
SND1-214ENST00000489417 IPO9Q96P70 1041 aaKnown RBP24.95■■□□□ 1.58
SND1-214ENST00000489417 RIOK1Q9BRS2 568 aaKnown RBP24.95■■□□□ 1.58
SND1-214ENST00000489417 TAOK3Q9H2K8 898 aa24.95■■□□□ 1.58
SND1-214ENST00000489417 CTNNA3Q9UI47 895 aa24.95■■□□□ 1.58
SND1-214ENST00000489417 IARSP41252 1262 aaKnown RBP24.94■■□□□ 1.58
SND1-214ENST00000489417 FKBP1AP62942 108 aaKnown RBP24.94■■□□□ 1.58
SND1-214ENST00000489417 STRIP1Q5VSL9 837 aa24.94■■□□□ 1.58
SND1-214ENST00000489417 CERS5Q8N5B7 392 aa24.94■■□□□ 1.58
SND1-214ENST00000489417 KCNQ5Q9NR82 932 aa24.94■■□□□ 1.58
SND1-214ENST00000489417 ARFGEF1Q9Y6D6 1849 aa24.93■■□□□ 1.58
SND1-214ENST00000489417 USP17L3A6NCW0 530 aa24.93■■□□□ 1.58
SND1-214ENST00000489417 USP17L4A6NCW7 530 aa24.93■■□□□ 1.58
SND1-214ENST00000489417 PATL2C9JE40 543 aaKnown RBP24.93■■□□□ 1.58
SND1-214ENST00000489417 DYNLL1P63167 89 aaKnown RBP24.93■■□□□ 1.58
SND1-214ENST00000489417 USP17L1Q7RTZ2 530 aa24.93■■□□□ 1.58
SND1-214ENST00000489417 SLC4A4Q9Y6R1 1079 aa24.93■■□□□ 1.58
SND1-214ENST00000489417 NFKBIEO00221 500 aa24.92■■□□□ 1.58
SND1-214ENST00000489417 APPP05067 770 aa24.92■■□□□ 1.58
SND1-214ENST00000489417 DIXDC1Q155Q3 683 aa24.92■■□□□ 1.58
SND1-214ENST00000489417 DACT2Q5SW24 774 aa24.92■■□□□ 1.58
SND1-214ENST00000489417 SLF2Q8IX21 1173 aa24.92■■□□□ 1.58
SND1-214ENST00000489417 MXD3Q9BW11 206 aa24.92■■□□□ 1.58
SND1-214ENST00000489417 MROH7-TTC4A0A0A0MT08 1334 aa24.92■■□□□ 1.58
SND1-214ENST00000489417 LTBP3Q9NS15 1303 aa24.92■■□□□ 1.58
SND1-214ENST00000489417 RPAP1Q9BWH6 1393 aaPredicted RBP24.91■■□□□ 1.58
SND1-214ENST00000489417 ZNF646O15015 1829 aaPredicted RBP24.91■■□□□ 1.58
SND1-214ENST00000489417 YDJCA8MPS7 323 aa24.91■■□□□ 1.58
SND1-214ENST00000489417 FGAP02671 866 aa24.91■■□□□ 1.58
SND1-214ENST00000489417 ALX1Q15699 326 aa24.91■■□□□ 1.58
SND1-214ENST00000489417 TSGA10IPQ3SY00 556 aa24.91■■□□□ 1.58
SND1-214ENST00000489417 SCN9AQ15858 1988 aa24.91■■□□□ 1.58
SND1-214ENST00000489417 COL4A5P29400 1685 aa24.91■■□□□ 1.58
SND1-214ENST00000489417 GSG1L2A8MUP6 293 aa24.9■■□□□ 1.58
SND1-214ENST00000489417 PRKAB2O43741 272 aa24.9■■□□□ 1.58
SND1-214ENST00000489417 CYP21A2P08686 494 aa24.9■■□□□ 1.58
SND1-214ENST00000489417 BECN1Q14457 450 aa24.9■■□□□ 1.58
SND1-214ENST00000489417 NIM1KQ8IY84 436 aa24.9■■□□□ 1.58
SND1-214ENST00000489417 AATFQ9NY61 560 aaKnown RBP eCLIP24.9■■□□□ 1.58
SND1-214ENST00000489417 ZMYM6O95789 1325 aa24.9■■□□□ 1.58
SND1-214ENST00000489417 SNX21Q969T3 373 aa24.89■■□□□ 1.58
SND1-214ENST00000489417 FAM163AQ96GL9 167 aaPredicted RBP24.89■■□□□ 1.58
SND1-214ENST00000489417 NOL10Q9BSC4 688 aaKnown RBP24.89■■□□□ 1.58
SND1-214ENST00000489417 EPB41L4AQ9HCS5 686 aaPredicted RBP24.89■■□□□ 1.58
SND1-214ENST00000489417 BAG3O95817 575 aa24.88■■□□□ 1.57
SND1-214ENST00000489417 KRT32Q14532 448 aa24.88■■□□□ 1.57
SND1-214ENST00000489417 IMMTQ16891 758 aaKnown RBP24.88■■□□□ 1.57
SND1-214ENST00000489417 IFNL3Q8IZI9 196 aa24.88■■□□□ 1.57
SND1-214ENST00000489417 JAKMIP1Q96N16 626 aaKnown RBP24.88■■□□□ 1.57
SND1-214ENST00000489417 NACAP1Q9BZK3 213 aa24.88■■□□□ 1.57
SND1-214ENST00000489417 TM6SF1Q9BZW5 370 aa24.88■■□□□ 1.57
SND1-214ENST00000489417 TTF2Q9UNY4 1162 aaKnown RBP24.88■■□□□ 1.57
SND1-214ENST00000489417 TAF6LQ9Y6J9 622 aa24.88■■□□□ 1.57
SND1-214ENST00000489417 GAKO14976 1311 aa24.88■■□□□ 1.57
SND1-214ENST00000489417 F8W031 263 aaPredicted RBP24.87■■□□□ 1.57
SND1-214ENST00000489417 PPP4CP60510 307 aa24.87■■□□□ 1.57
SND1-214ENST00000489417 ADCK5Q3MIX3 580 aa24.87■■□□□ 1.57
SND1-214ENST00000489417 CERS3Q8IU89 383 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms