RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 SP3Q02447 781 aa13.71□□□□□ -0.21
PTP4A2-206ENST00000489313 CCDC57Q2TAC2 916 aa13.71□□□□□ -0.21
PTP4A2-206ENST00000489313 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
PTP4A2-206ENST00000489313 GCC1Q96CN9 775 aa13.71□□□□□ -0.21
PTP4A2-206ENST00000489313 OPTNQ96CV9 577 aa13.71□□□□□ -0.21
PTP4A2-206ENST00000489313 TDRD3Q9H7E2 651 aaKnown RBP13.71□□□□□ -0.21
PTP4A2-206ENST00000489313 ZNF70Q9UC06 446 aaPredicted RBP13.71□□□□□ -0.21
PTP4A2-206ENST00000489313 TTF2Q9UNY4 1162 aaKnown RBP13.71□□□□□ -0.21
PTP4A2-206ENST00000489313 SALL2Q9Y467 1007 aaPredicted RBP13.71□□□□□ -0.21
PTP4A2-206ENST00000489313 ARAP2Q8WZ64 1704 aa13.71□□□□□ -0.22
PTP4A2-206ENST00000489313 TESPA1A2RU30 521 aaPredicted RBP13.71□□□□□ -0.22
PTP4A2-206ENST00000489313 EN2P19622 333 aaPredicted RBP13.71□□□□□ -0.22
PTP4A2-206ENST00000489313 GYG1P46976 350 aa13.71□□□□□ -0.22
PTP4A2-206ENST00000489313 EXOSC9Q06265 439 aaKnown RBP13.71□□□□□ -0.22
PTP4A2-206ENST00000489313 MFSD14BQ5SR56 506 aa13.71□□□□□ -0.22
PTP4A2-206ENST00000489313 FAM205AQ6ZU69 1335 aa13.7□□□□□ -0.22
PTP4A2-206ENST00000489313 TCP10L2B9ZVM9 353 aa13.7□□□□□ -0.22
PTP4A2-206ENST00000489313 GRM8O00222 908 aa13.7□□□□□ -0.22
PTP4A2-206ENST00000489313 TNFAIP1Q13829 316 aa13.7□□□□□ -0.22
PTP4A2-206ENST00000489313 HABP4Q5JVS0 413 aaKnown RBP13.7□□□□□ -0.22
PTP4A2-206ENST00000489313 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.7□□□□□ -0.22
PTP4A2-206ENST00000489313 ARMC5Q96C12 935 aa13.7□□□□□ -0.22
PTP4A2-206ENST00000489313 MS4A4AQ96JQ5 239 aa13.7□□□□□ -0.22
PTP4A2-206ENST00000489313 TEPSINQ96N21 525 aa13.7□□□□□ -0.22
PTP4A2-206ENST00000489313 HIBADHP31937 336 aaKnown RBP13.69□□□□□ -0.22
PTP4A2-206ENST00000489313 DZIP1LQ8IYY4 767 aaKnown RBP13.69□□□□□ -0.22
PTP4A2-206ENST00000489313 TDRD7Q8NHU6 1098 aaKnown RBP13.69□□□□□ -0.22
PTP4A2-206ENST00000489313 BRI3BPQ8WY22 251 aa13.69□□□□□ -0.22
PTP4A2-206ENST00000489313 TMEM39BQ9GZU3 492 aa13.69□□□□□ -0.22
PTP4A2-206ENST00000489313 SERPINA10Q9UK55 444 aa13.69□□□□□ -0.22
PTP4A2-206ENST00000489313 VGLL4Q14135 290 aa13.68□□□□□ -0.22
PTP4A2-206ENST00000489313 UBE4AQ14139 1066 aa13.68□□□□□ -0.22
PTP4A2-206ENST00000489313 GRIK5Q16478 980 aa13.68□□□□□ -0.22
PTP4A2-206ENST00000489313 FAM84BQ96KN1 310 aaPredicted RBP13.68□□□□□ -0.22
PTP4A2-206ENST00000489313 PUS3Q9BZE2 481 aaKnown RBP13.68□□□□□ -0.22
PTP4A2-206ENST00000489313 C9orf78Q9NZ63 289 aaPredicted RBP13.68□□□□□ -0.22
PTP4A2-206ENST00000489313 ZSWIM8A7E2V4 1837 aa13.68□□□□□ -0.22
PTP4A2-206ENST00000489313 TRIOBPQ9H2D6 2365 aa13.68□□□□□ -0.22
PTP4A2-206ENST00000489313 CCL15-CCL14A0A0B4J2E2 113 aa13.67□□□□□ -0.22
PTP4A2-206ENST00000489313 CRKP46108 304 aa13.67□□□□□ -0.22
PTP4A2-206ENST00000489313 TAF1CQ15572 869 aaPredicted RBP13.67□□□□□ -0.22
PTP4A2-206ENST00000489313 CCL15Q16663 113 aa13.67□□□□□ -0.22
PTP4A2-206ENST00000489313 OTUD5Q96G74 571 aa13.67□□□□□ -0.22
PTP4A2-206ENST00000489313 IQSEC3Q9UPP2 1182 aaPredicted RBP13.67□□□□□ -0.22
PTP4A2-206ENST00000489313 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 SLC4A10Q6U841 1118 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 FAM43AQ8N2R8 423 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 ZNF333Q96JL9 665 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 PTCH2Q9Y6C5 1203 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 GABBR2O75899 941 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 MYCP01106 439 aaPredicted RBP13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 GTF2A2P52657 109 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 CACNB3P54284 484 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 MAP3K9P80192 1104 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 CHAF1AQ13111 956 aaPredicted RBP13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 SLC9C1Q4G0N8 1177 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 SUCLG2Q96I99 432 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 TMEM106CQ9BVX2 250 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 ZFYVE28Q9HCC9 887 aa13.66□□□□□ -0.22
PTP4A2-206ENST00000489313 TNNI2P48788 182 aa13.65□□□□□ -0.22
PTP4A2-206ENST00000489313 KAZALD1Q96I82 304 aa13.65□□□□□ -0.22
PTP4A2-206ENST00000489313 CSADQ9Y600 493 aa13.65□□□□□ -0.22
PTP4A2-206ENST00000489313 A0A0C4DFX4 3053 aa13.65□□□□□ -0.22
PTP4A2-206ENST00000489313 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
PTP4A2-206ENST00000489313 VPS37DQ86XT2 251 aa13.64□□□□□ -0.23
PTP4A2-206ENST00000489313 SRCIN1Q9C0H9 1055 aa13.64□□□□□ -0.23
PTP4A2-206ENST00000489313 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
PTP4A2-206ENST00000489313 RIPOR2Q9Y4F9 1068 aa13.64□□□□□ -0.23
PTP4A2-206ENST00000489313 SPDYE5A6NIY4 337 aa13.63□□□□□ -0.23
PTP4A2-206ENST00000489313 FRAT2O75474 233 aaPredicted RBP13.63□□□□□ -0.23
PTP4A2-206ENST00000489313 ARHGEF6Q15052 776 aa13.63□□□□□ -0.23
PTP4A2-206ENST00000489313 SLC4A8Q2Y0W8 1093 aa13.63□□□□□ -0.23
PTP4A2-206ENST00000489313 FBXO33Q7Z6M2 555 aa13.63□□□□□ -0.23
PTP4A2-206ENST00000489313 NBPF11Q86T75 865 aa13.63□□□□□ -0.23
PTP4A2-206ENST00000489313 ARHGAP39Q9C0H5 1083 aa13.63□□□□□ -0.23
PTP4A2-206ENST00000489313 SNCAIPQ9Y6H5 919 aa13.63□□□□□ -0.23
PTP4A2-206ENST00000489313 ECM2O94769 699 aaPredicted RBP13.62□□□□□ -0.23
PTP4A2-206ENST00000489313 NBPF7P0C2Y1 421 aaPredicted RBP13.62□□□□□ -0.23
PTP4A2-206ENST00000489313 LRRC24Q50LG9 513 aa13.62□□□□□ -0.23
PTP4A2-206ENST00000489313 MROH5Q6ZUA9 1318 aa13.62□□□□□ -0.23
PTP4A2-206ENST00000489313 SH3TC2Q8TF17 1288 aa13.62□□□□□ -0.23
PTP4A2-206ENST00000489313 ZKSCAN4Q969J2 545 aaPredicted RBP13.62□□□□□ -0.23
PTP4A2-206ENST00000489313 WRNIP1Q96S55 665 aa13.62□□□□□ -0.23
PTP4A2-206ENST00000489313 FXR1P51114 621 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTP4A2-206ENST00000489313 METTL24Q5JXM2 366 aa13.62□□□□□ -0.23
PTP4A2-206ENST00000489313 TEKT1Q969V4 418 aa13.62□□□□□ -0.23
PTP4A2-206ENST00000489313 BICC1Q9H694 974 aaKnown RBP13.62□□□□□ -0.23
PTP4A2-206ENST00000489313 BTBD19C9JJ37 291 aa13.61□□□□□ -0.23
PTP4A2-206ENST00000489313 IRF6O14896 467 aa13.61□□□□□ -0.23
PTP4A2-206ENST00000489313 TLR2O60603 784 aa13.61□□□□□ -0.23
PTP4A2-206ENST00000489313 CETPP11597 493 aa13.61□□□□□ -0.23
PTP4A2-206ENST00000489313 HDLBPQ00341 1268 aaKnown RBP13.61□□□□□ -0.23
PTP4A2-206ENST00000489313 ERO1BQ86YB8 467 aa13.61□□□□□ -0.23
PTP4A2-206ENST00000489313 TBC1D22AQ8WUA7 517 aa13.61□□□□□ -0.23
PTP4A2-206ENST00000489313 AK9Q5TCS8 1911 aa13.6□□□□□ -0.23
PTP4A2-206ENST00000489313 MYH13Q9UKX3 1938 aa13.6□□□□□ -0.23
PTP4A2-206ENST00000489313 WDHD1O75717 1129 aaPredicted RBP13.6□□□□□ -0.23
PTP4A2-206ENST00000489313 BCAMP50895 628 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms