RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 DOK7Q18PE1 504 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 VPS53Q5VIR6 699 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 MIGA1Q8NAN2 632 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 IL27Q8NEV9 243 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 IL17RAQ96F46 866 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 ARMT1Q9H993 441 aa11.96□□□□□ -0.49
USP11-211ENST00000489111 FAM205AQ6ZU69 1335 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 PPIP5K2O43314 1243 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 PSMA5P28066 241 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 NEK4P51957 841 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 GTF2IP78347 998 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 KIAA2012Q0VF49 1180 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 MFSD14BQ5SR56 506 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 RASEFQ8IZ41 740 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 KCNB2Q92953 911 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 SNX21Q969T3 373 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 NSUN4Q96CB9 384 aaKnown RBP11.95□□□□□ -0.5
USP11-211ENST00000489111 JAKMIP1Q96N16 626 aaKnown RBP11.95□□□□□ -0.5
USP11-211ENST00000489111 STRBPQ96SI9 672 aaKnown RBP11.95□□□□□ -0.5
USP11-211ENST00000489111 PSMD1Q99460 953 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 NOL10Q9BSC4 688 aaKnown RBP11.95□□□□□ -0.5
USP11-211ENST00000489111 TBC1D2Q9BYX2 928 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 NACAP1Q9BZK3 213 aa11.95□□□□□ -0.5
USP11-211ENST00000489111 ECE2O60344 883 aa11.94□□□□□ -0.5
USP11-211ENST00000489111 LDHCP07864 332 aa11.94□□□□□ -0.5
USP11-211ENST00000489111 AOC3Q16853 763 aa11.94□□□□□ -0.5
USP11-211ENST00000489111 IMMTQ16891 758 aaKnown RBP11.94□□□□□ -0.5
USP11-211ENST00000489111 ILDR2Q71H61 639 aa11.94□□□□□ -0.5
USP11-211ENST00000489111 PODNQ7Z5L7 613 aa11.94□□□□□ -0.5
USP11-211ENST00000489111 SLF2Q8IX21 1173 aa11.94□□□□□ -0.5
USP11-211ENST00000489111 LCORLQ8N3X6 602 aa11.94□□□□□ -0.5
USP11-211ENST00000489111 UPF3BQ9BZI7 483 aaKnown RBP11.94□□□□□ -0.5
USP11-211ENST00000489111 DBNDD1Q9H9R9 158 aa11.94□□□□□ -0.5
USP11-211ENST00000489111 SLC4A4Q9Y6R1 1079 aa11.94□□□□□ -0.5
USP11-211ENST00000489111 SNED1Q8TER0 1413 aa11.94□□□□□ -0.5
USP11-211ENST00000489111 AKAP11Q9UKA4 1901 aa11.94□□□□□ -0.5
USP11-211ENST00000489111 CASTP20810 708 aaKnown RBP11.93□□□□□ -0.5
USP11-211ENST00000489111 TDO2P48775 406 aa11.93□□□□□ -0.5
USP11-211ENST00000489111 ADGRA1Q86SQ6 560 aa11.93□□□□□ -0.5
USP11-211ENST00000489111 CERS3Q8IU89 383 aa11.93□□□□□ -0.5
USP11-211ENST00000489111 CRNKL1Q9BZJ0 848 aaKnown RBP11.93□□□□□ -0.5
USP11-211ENST00000489111 TM6SF1Q9BZW5 370 aa11.93□□□□□ -0.5
USP11-211ENST00000489111 NAPBQ9H115 298 aa11.93□□□□□ -0.5
USP11-211ENST00000489111 SUGT1Q9Y2Z0 365 aa11.93□□□□□ -0.5
USP11-211ENST00000489111 CYP46A1Q9Y6A2 500 aa11.93□□□□□ -0.5
USP11-211ENST00000489111 RPAP1Q9BWH6 1393 aaPredicted RBP11.92□□□□□ -0.5
USP11-211ENST00000489111 DLEC1Q9Y238 1755 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 ZMYM6O95789 1325 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 K7ELQ4 463 aaPredicted RBP11.92□□□□□ -0.5
USP11-211ENST00000489111 FOXP2O15409 715 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 BAG3O95817 575 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 FGAP02671 866 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 CYP21A2P08686 494 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 SLC4A3P48751 1232 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 MCM2P49736 904 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 TSGA10IPQ3SY00 556 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 TTLL5Q6EMB2 1281 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 BLOC1S2Q6QNY1 142 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 LARGE2Q8N3Y3 721 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 RIOK1Q9BRS2 568 aaKnown RBP11.92□□□□□ -0.5
USP11-211ENST00000489111 BCS1LQ9Y276 419 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 SLX4Q8IY92 1834 aa11.92□□□□□ -0.5
USP11-211ENST00000489111 MROH7-TTC4A0A0A0MT08 1334 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 DOCK2Q92608 1830 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 KIF13BQ9NQT8 1826 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
USP11-211ENST00000489111 ZNF213O14771 459 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 HSP90AA1P07900 732 aaKnown RBP11.91□□□□□ -0.5
USP11-211ENST00000489111 HMGB1P09429 215 aaKnown RBP11.91□□□□□ -0.5
USP11-211ENST00000489111 DYNLL1P63167 89 aaKnown RBP11.91□□□□□ -0.5
USP11-211ENST00000489111 DIXDC1Q155Q3 683 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 ALX1Q15699 326 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 ADCK5Q3MIX3 580 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 STRIP1Q5VSL9 837 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 ZNF384Q8TF68 577 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 VPS33BQ9H267 617 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 TAOK3Q9H2K8 898 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 ZSWIM6Q9HCJ5 1215 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 ZNF277Q9NRM2 450 aaPredicted RBP11.91□□□□□ -0.5
USP11-211ENST00000489111 AATFQ9NY61 560 aaKnown RBP eCLIP11.91□□□□□ -0.5
USP11-211ENST00000489111 MAST2Q6P0Q8 1798 aa11.91□□□□□ -0.5
USP11-211ENST00000489111 GSG1L2A8MUP6 293 aa11.9□□□□□ -0.5
USP11-211ENST00000489111 PRKAB2O43741 272 aa11.9□□□□□ -0.5
USP11-211ENST00000489111 CD2BP2O95400 341 aaKnown RBP11.9□□□□□ -0.5
USP11-211ENST00000489111 PLCG2P16885 1265 aa11.9□□□□□ -0.5
USP11-211ENST00000489111 HAND2P61296 217 aa11.9□□□□□ -0.5
USP11-211ENST00000489111 GRIK5Q16478 980 aa11.9□□□□□ -0.5
USP11-211ENST00000489111 RUFY3Q7L099 469 aa11.9□□□□□ -0.5
USP11-211ENST00000489111 RALYLQ86SE5 291 aaKnown RBP11.9□□□□□ -0.5
USP11-211ENST00000489111 NIM1KQ8IY84 436 aa11.9□□□□□ -0.5
USP11-211ENST00000489111 IFNL3Q8IZI9 196 aa11.9□□□□□ -0.5
USP11-211ENST00000489111 NEK1Q96PY6 1258 aa11.9□□□□□ -0.5
USP11-211ENST00000489111 EPB41L4AQ9HCS5 686 aaPredicted RBP11.9□□□□□ -0.5
USP11-211ENST00000489111 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.5
USP11-211ENST00000489111 TAF6LQ9Y6J9 622 aa11.9□□□□□ -0.5
USP11-211ENST00000489111 F8W031 263 aaPredicted RBP11.89□□□□□ -0.51
USP11-211ENST00000489111 RPS6KB1P23443 525 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms