RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ZNF70Q9UC06 446 aaPredicted RBP28.67■■■□□ 2.18
COL9A3-213ENST00000489045 REM2Q8IYK8 340 aaPredicted RBP28.66■■■□□ 2.18
COL9A3-213ENST00000489045 DZIP1LQ8IYY4 767 aaKnown RBP28.66■■■□□ 2.18
COL9A3-213ENST00000489045 TDRD3Q9H7E2 651 aaKnown RBP28.66■■■□□ 2.18
COL9A3-213ENST00000489045 CEP126Q9P2H0 1117 aa28.66■■■□□ 2.18
COL9A3-213ENST00000489045 TRPA1O75762 1119 aa28.65■■■□□ 2.18
COL9A3-213ENST00000489045 ATP2B3Q16720 1220 aa28.65■■■□□ 2.18
COL9A3-213ENST00000489045 IL15P40933 162 aaPredicted RBP28.64■■■□□ 2.18
COL9A3-213ENST00000489045 RASA3Q14644 834 aa28.64■■■□□ 2.18
COL9A3-213ENST00000489045 LDLRAD1Q5T700 205 aa28.64■■■□□ 2.18
COL9A3-213ENST00000489045 CLUAP1Q96AJ1 413 aa28.64■■■□□ 2.18
COL9A3-213ENST00000489045 COPRSQ9NQ92 184 aa28.64■■■□□ 2.18
COL9A3-213ENST00000489045 OTOFQ9HC10 1997 aa28.64■■■□□ 2.17
COL9A3-213ENST00000489045 MKRN3Q13064 507 aaKnown RBP28.63■■■□□ 2.17
COL9A3-213ENST00000489045 TNFAIP1Q13829 316 aa28.63■■■□□ 2.17
COL9A3-213ENST00000489045 SUPT20HL1Q3ZLR7 823 aa28.63■■■□□ 2.17
COL9A3-213ENST00000489045 NBPF12Q5TAG4 269 aaPredicted RBP28.63■■■□□ 2.17
COL9A3-213ENST00000489045 PPP1R12BO60237 982 aaPredicted RBP28.62■■■□□ 2.17
COL9A3-213ENST00000489045 HDLBPQ00341 1268 aaKnown RBP28.62■■■□□ 2.17
COL9A3-213ENST00000489045 MAP3K11Q16584 847 aa28.62■■■□□ 2.17
COL9A3-213ENST00000489045 LAMB1P07942 1786 aa28.61■■■□□ 2.17
COL9A3-213ENST00000489045 SRGAP3O43295 1099 aa28.61■■■□□ 2.17
COL9A3-213ENST00000489045 TEKT1Q969V4 418 aa28.61■■■□□ 2.17
COL9A3-213ENST00000489045 ABHD8Q96I13 439 aa28.61■■■□□ 2.17
COL9A3-213ENST00000489045 MTX1Q13505 466 aa28.6■■■□□ 2.17
COL9A3-213ENST00000489045 SUGT1Q9Y2Z0 365 aa28.6■■■□□ 2.17
COL9A3-213ENST00000489045 MAST3O60307 1309 aa28.6■■■□□ 2.17
COL9A3-213ENST00000489045 TCP10L2B9ZVM9 353 aa28.59■■■□□ 2.17
COL9A3-213ENST00000489045 ZKSCAN2Q63HK3 967 aa28.59■■■□□ 2.17
COL9A3-213ENST00000489045 WDR66Q8TBY9 1149 aa28.59■■■□□ 2.17
COL9A3-213ENST00000489045 SPRYD7Q5W111 196 aa28.58■■■□□ 2.17
COL9A3-213ENST00000489045 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.58■■■□□ 2.17
COL9A3-213ENST00000489045 GNAI2P04899 355 aa28.57■■■□□ 2.16
COL9A3-213ENST00000489045 CDAN1Q8IWY9 1227 aa28.57■■■□□ 2.16
COL9A3-213ENST00000489045 TMEM57Q8N5G2 664 aa28.57■■■□□ 2.16
COL9A3-213ENST00000489045 CLMNQ96JQ2 1002 aa28.57■■■□□ 2.16
COL9A3-213ENST00000489045 ZDHHC15Q96MV8 337 aa28.57■■■□□ 2.16
COL9A3-213ENST00000489045 MRIQ9BWK5 157 aa28.57■■■□□ 2.16
COL9A3-213ENST00000489045 GNL3LQ9NVN8 582 aaKnown RBP28.57■■■□□ 2.16
COL9A3-213ENST00000489045 PHKA1P46020 1223 aa28.56■■■□□ 2.16
COL9A3-213ENST00000489045 IREB2P48200 963 aaKnown RBP28.56■■■□□ 2.16
COL9A3-213ENST00000489045 TM4SF4P48230 202 aa28.56■■■□□ 2.16
COL9A3-213ENST00000489045 TNNI2P48788 182 aa28.56■■■□□ 2.16
COL9A3-213ENST00000489045 ZBED9Q6R2W3 1325 aa28.56■■■□□ 2.16
COL9A3-213ENST00000489045 SLC10A4Q96EP9 437 aa28.56■■■□□ 2.16
COL9A3-213ENST00000489045 TEPSINQ96N21 525 aa28.56■■■□□ 2.16
COL9A3-213ENST00000489045 MCOLN1Q9GZU1 580 aa28.56■■■□□ 2.16
COL9A3-213ENST00000489045 TMEM39BQ9GZU3 492 aa28.56■■■□□ 2.16
COL9A3-213ENST00000489045 USP2O75604 605 aaPredicted RBP28.55■■■□□ 2.16
COL9A3-213ENST00000489045 ADORA1P30542 326 aa28.55■■■□□ 2.16
COL9A3-213ENST00000489045 CACNB3P54284 484 aa28.55■■■□□ 2.16
COL9A3-213ENST00000489045 SREBF2Q12772 1141 aa28.55■■■□□ 2.16
COL9A3-213ENST00000489045 APOBEC3HQ6NTF7 200 aaKnown RBP28.54■■■□□ 2.16
COL9A3-213ENST00000489045 HHIPL2Q6UWX4 724 aa28.54■■■□□ 2.16
COL9A3-213ENST00000489045 UNCXA6NJT0 531 aa28.53■■■□□ 2.16
COL9A3-213ENST00000489045 TFCP2Q12800 502 aa28.53■■■□□ 2.16
COL9A3-213ENST00000489045 DGKZQ13574 1117 aa28.53■■■□□ 2.16
COL9A3-213ENST00000489045 WNK4Q96J92 1243 aa28.53■■■□□ 2.16
COL9A3-213ENST00000489045 SEMA3EO15041 775 aa28.52■■■□□ 2.16
COL9A3-213ENST00000489045 PRDX5P30044 214 aa28.52■■■□□ 2.16
COL9A3-213ENST00000489045 CCDC102BQ68D86 513 aa28.52■■■□□ 2.16
COL9A3-213ENST00000489045 TMOD2Q9NZR1 351 aa28.52■■■□□ 2.16
COL9A3-213ENST00000489045 DENND2AQ9ULE3 1009 aa28.52■■■□□ 2.16
COL9A3-213ENST00000489045 MYH2Q9UKX2 1941 aa28.51■■■□□ 2.16
COL9A3-213ENST00000489045 PNMA6EA0A0J9YXQ4 647 aa28.51■■■□□ 2.15
COL9A3-213ENST00000489045 ZBTB48P10074 688 aaPredicted RBP28.51■■■□□ 2.15
COL9A3-213ENST00000489045 TIMM10P62072 90 aa28.51■■■□□ 2.15
COL9A3-213ENST00000489045 ANKRD13AQ8IZ07 590 aa28.51■■■□□ 2.15
COL9A3-213ENST00000489045 SALL1Q9NSC2 1324 aa28.5■■■□□ 2.15
COL9A3-213ENST00000489045 A0A1B0GUL7 405 aa28.5■■■□□ 2.15
COL9A3-213ENST00000489045 TBC1D8O95759 1140 aa28.5■■■□□ 2.15
COL9A3-213ENST00000489045 AKAP2Q9Y2D5 859 aa28.5■■■□□ 2.15
COL9A3-213ENST00000489045 LDHBP07195 334 aaKnown RBP28.49■■■□□ 2.15
COL9A3-213ENST00000489045 DIXDC1Q155Q3 683 aa28.49■■■□□ 2.15
COL9A3-213ENST00000489045 FTSJ3Q8IY81 847 aaKnown RBP28.49■■■□□ 2.15
COL9A3-213ENST00000489045 DAGLAQ9Y4D2 1042 aa28.49■■■□□ 2.15
COL9A3-213ENST00000489045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.49■■■□□ 2.15
COL9A3-213ENST00000489045 MANSC4A6NHS7 340 aaPredicted RBP28.48■■■□□ 2.15
COL9A3-213ENST00000489045 ZBTB22O15209 634 aa28.48■■■□□ 2.15
COL9A3-213ENST00000489045 FKBP1CQ5VVH2 108 aa28.48■■■□□ 2.15
COL9A3-213ENST00000489045 FAM83AQ86UY5 434 aa28.48■■■□□ 2.15
COL9A3-213ENST00000489045 XAGE2Q96GT9 111 aa28.48■■■□□ 2.15
COL9A3-213ENST00000489045 AK9Q5TCS8 1911 aa28.47■■■□□ 2.15
COL9A3-213ENST00000489045 GJA5P36382 358 aa28.47■■■□□ 2.15
COL9A3-213ENST00000489045 RASGRF1Q13972 1273 aa28.47■■■□□ 2.15
COL9A3-213ENST00000489045 CCDC85CA6NKD9 419 aa28.46■■■□□ 2.15
COL9A3-213ENST00000489045 RLBP1P12271 317 aa28.46■■■□□ 2.15
COL9A3-213ENST00000489045 ELP3Q9H9T3 547 aa28.46■■■□□ 2.15
COL9A3-213ENST00000489045 RPAP1Q9BWH6 1393 aaPredicted RBP28.46■■■□□ 2.15
COL9A3-213ENST00000489045 MVPQ14764 893 aaKnown RBP28.45■■■□□ 2.14
COL9A3-213ENST00000489045 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.45■■■□□ 2.14
COL9A3-213ENST00000489045 ITPRIPQ8IWB1 547 aa28.45■■■□□ 2.14
COL9A3-213ENST00000489045 NEUROD6Q96NK8 337 aa28.45■■■□□ 2.14
COL9A3-213ENST00000489045 PDS5AQ29RF7 1337 aaKnown RBP28.44■■■□□ 2.14
COL9A3-213ENST00000489045 INHBEP58166 350 aa28.44■■■□□ 2.14
COL9A3-213ENST00000489045 G3BP1Q13283 466 aaKnown RBP eCLIP28.44■■■□□ 2.14
COL9A3-213ENST00000489045 ZGPATQ8N5A5 531 aaKnown RBP28.44■■■□□ 2.14
COL9A3-213ENST00000489045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.44■■■□□ 2.14
COL9A3-213ENST00000489045 ZNF296Q8WUU4 475 aaPredicted RBP28.44■■■□□ 2.14
COL9A3-213ENST00000489045 CFHR5Q9BXR6 569 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms