RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 GGA3Q9NZ52 723 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 HMG20BQ9P0W2 317 aa8.08□□□□□ -1.12
PTPRD-212ENST00000488774 CLRN2A0PK11 232 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 IGHDP01880 384 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 SLC5A1P13866 664 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 RPS12P25398 132 aaKnown RBP8.07□□□□□ -1.12
PTPRD-212ENST00000488774 LMOD1P29536 600 aaPredicted RBP8.07□□□□□ -1.12
PTPRD-212ENST00000488774 FSTL1Q12841 308 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 CFAP100Q494V2 611 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 ADGRA1Q86SQ6 560 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 RHPN1Q8TCX5 695 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 NEUROD6Q96NK8 337 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 ZIC5Q96T25 663 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 BCL11AQ9H165 835 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 ANTXR1Q9H6X2 564 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 FBXO3Q9UK99 471 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 CNTNAP1P78357 1384 aa8.07□□□□□ -1.12
PTPRD-212ENST00000488774 NAV1Q8NEY1 1877 aa8.06□□□□□ -1.12
PTPRD-212ENST00000488774 SPDYE2BA6NHP3 402 aa8.06□□□□□ -1.12
PTPRD-212ENST00000488774 H7C1D1 291 aa8.06□□□□□ -1.12
PTPRD-212ENST00000488774 CYP2E1P05181 493 aaPredicted RBP8.06□□□□□ -1.12
PTPRD-212ENST00000488774 IFIT1P09914 478 aaKnown RBP8.06□□□□□ -1.12
PTPRD-212ENST00000488774 SPDYE6P0CI01 402 aa8.06□□□□□ -1.12
PTPRD-212ENST00000488774 ARID4AP29374 1257 aaPredicted RBP8.06□□□□□ -1.12
PTPRD-212ENST00000488774 APLP1P51693 650 aa8.06□□□□□ -1.12
PTPRD-212ENST00000488774 G3BP1Q13283 466 aaKnown RBP eCLIP8.06□□□□□ -1.12
PTPRD-212ENST00000488774 APOBEC3HQ6NTF7 200 aaKnown RBP8.06□□□□□ -1.12
PTPRD-212ENST00000488774 ZFPM1Q8IX07 1006 aa8.06□□□□□ -1.12
PTPRD-212ENST00000488774 TDRD3Q9H7E2 651 aaKnown RBP8.06□□□□□ -1.12
PTPRD-212ENST00000488774 PIH1D3Q9NQM4 214 aaKnown RBP8.06□□□□□ -1.12
PTPRD-212ENST00000488774 TTF2Q9UNY4 1162 aaKnown RBP8.06□□□□□ -1.12
PTPRD-212ENST00000488774 ZSWIM8A7E2V4 1837 aa8.06□□□□□ -1.12
PTPRD-212ENST00000488774 MYH8P13535 1937 aa8.05□□□□□ -1.12
PTPRD-212ENST00000488774 HTTP42858 3142 aa8.05□□□□□ -1.12
PTPRD-212ENST00000488774 CASP8AP2Q9UKL3 1982 aa8.05□□□□□ -1.12
PTPRD-212ENST00000488774 ZAP70P43403 619 aa8.05□□□□□ -1.12
PTPRD-212ENST00000488774 CRKP46108 304 aa8.05□□□□□ -1.12
PTPRD-212ENST00000488774 FKBP1AP62942 108 aaKnown RBP8.05□□□□□ -1.12
PTPRD-212ENST00000488774 EVX2Q03828 476 aa8.05□□□□□ -1.12
PTPRD-212ENST00000488774 PNMA8AQ86V59 439 aaPredicted RBP8.05□□□□□ -1.12
PTPRD-212ENST00000488774 SKAP1Q86WV1 359 aa8.05□□□□□ -1.12
PTPRD-212ENST00000488774 RPAP2Q8IXW5 612 aaPredicted RBP8.05□□□□□ -1.12
PTPRD-212ENST00000488774 DAGLAQ9Y4D2 1042 aa8.05□□□□□ -1.12
PTPRD-212ENST00000488774 RFX7Q2KHR2 1363 aa8.05□□□□□ -1.12
PTPRD-212ENST00000488774 NFIAQ12857 509 aa8.04□□□□□ -1.12
PTPRD-212ENST00000488774 CAVIN4Q5BKX8 364 aa8.04□□□□□ -1.12
PTPRD-212ENST00000488774 KRT26Q7Z3Y9 468 aa8.04□□□□□ -1.12
PTPRD-212ENST00000488774 AACSQ86V21 672 aa8.04□□□□□ -1.12
PTPRD-212ENST00000488774 VPS37DQ86XT2 251 aa8.04□□□□□ -1.12
PTPRD-212ENST00000488774 MTMR14Q8NCE2 650 aa8.04□□□□□ -1.12
PTPRD-212ENST00000488774 CDCA5Q96FF9 252 aa8.04□□□□□ -1.12
PTPRD-212ENST00000488774 TEPSINQ96N21 525 aa8.04□□□□□ -1.12
PTPRD-212ENST00000488774 DCTPP1Q9H773 170 aa8.04□□□□□ -1.12
PTPRD-212ENST00000488774 GPR108Q9NPR9 543 aa8.04□□□□□ -1.12
PTPRD-212ENST00000488774 ZNF70Q9UC06 446 aaPredicted RBP8.04□□□□□ -1.12
PTPRD-212ENST00000488774 MKRN1Q9UHC7 482 aaKnown RBP8.04□□□□□ -1.12
PTPRD-212ENST00000488774 BRCA2P51587 3418 aa8.04□□□□□ -1.12
PTPRD-212ENST00000488774 SALL3Q9BXA9 1300 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 DOCK1Q14185 1865 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 SMIM22K7EJ46 135 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 CELF2O95319 508 aaKnown RBP8.03□□□□□ -1.12
PTPRD-212ENST00000488774 MS4A1P11836 297 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 MECOMQ03112 1051 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 OS9Q13438 667 aaPredicted RBP8.03□□□□□ -1.12
PTPRD-212ENST00000488774 SPDYE2Q495Y8 402 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 NBPF12Q5TAG4 269 aaPredicted RBP8.03□□□□□ -1.12
PTPRD-212ENST00000488774 SH3BP5LQ7L8J4 393 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.03□□□□□ -1.12
PTPRD-212ENST00000488774 SPATA5Q8NB90 893 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 ZC3H15Q8WU90 426 aaKnown RBP8.03□□□□□ -1.12
PTPRD-212ENST00000488774 TMEM39BQ9GZU3 492 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 ZNF408Q9H9D4 720 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 DDX4Q9NQI0 724 aaKnown RBP8.03□□□□□ -1.12
PTPRD-212ENST00000488774 FAM198AQ9UFP1 575 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 MYO3BQ8WXR4 1341 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 SALL1Q9NSC2 1324 aa8.03□□□□□ -1.12
PTPRD-212ENST00000488774 TCP10L2B9ZVM9 353 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 ZBTB22O15209 634 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 AOC2O75106 756 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 VEGFBP49765 207 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 RHBDL3P58872 404 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 PRKG1Q13976 671 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 DLGAP5Q15398 846 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 CYP4F22Q6NT55 531 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 CDC42EP5Q6NZY7 148 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 NSUN4Q96CB9 384 aaKnown RBP8.02□□□□□ -1.13
PTPRD-212ENST00000488774 ZDHHC15Q96MV8 337 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 ABCF2Q9UG63 623 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 SERPINA10Q9UK55 444 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 HDAC5Q9UQL6 1122 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 AKAP2Q9Y2D5 859 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 GAKO14976 1311 aa8.02□□□□□ -1.13
PTPRD-212ENST00000488774 ATRNL1Q5VV63 1379 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 TMEM88BA6NKF7 163 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 FAM155AB1AL88 458 aaPredicted RBP8.01□□□□□ -1.13
PTPRD-212ENST00000488774 UBE2Q2LH0YL09 131 aa8.01□□□□□ -1.13
PTPRD-212ENST00000488774 FRAT2O75474 233 aaPredicted RBP8.01□□□□□ -1.13
PTPRD-212ENST00000488774 MAP4K4O95819 1239 aaPredicted RBP8.01□□□□□ -1.13
PTPRD-212ENST00000488774 RBM5P52756 815 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPRD-212ENST00000488774 DYNLL1P63167 89 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms