RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
NELFE-209ENST00000488426 RNF113AO15541 343 aaKnown RBP15.25■□□□□ 0.03
NELFE-209ENST00000488426 PTH1RQ03431 593 aa15.25■□□□□ 0.03
NELFE-209ENST00000488426 ZMYM1Q5SVZ6 1142 aa15.25■□□□□ 0.03
NELFE-209ENST00000488426 VPS33BQ9H267 617 aa15.25■□□□□ 0.03
NELFE-209ENST00000488426 ANTXR1Q9H6X2 564 aa15.25■□□□□ 0.03
NELFE-209ENST00000488426 PALD1Q9ULE6 856 aa15.25■□□□□ 0.03
NELFE-209ENST00000488426 DOCK2Q92608 1830 aa15.25■□□□□ 0.03
NELFE-209ENST00000488426 LDHDQ86WU2 507 aa15.25■□□□□ 0.03
NELFE-209ENST00000488426 KCNB2Q92953 911 aa15.25■□□□□ 0.03
NELFE-209ENST00000488426 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.25■□□□□ 0.037e-9■■■■□ 20.6
NELFE-209ENST00000488426 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
NELFE-209ENST00000488426 K7ELQ4 463 aaPredicted RBP15.24■□□□□ 0.03
NELFE-209ENST00000488426 GMPSP49915 693 aaPredicted RBP15.24■□□□□ 0.03
NELFE-209ENST00000488426 ZSCAN25Q6NSZ9 544 aa15.24■□□□□ 0.03
NELFE-209ENST00000488426 ZNF589Q86UQ0 364 aaPredicted RBP15.24■□□□□ 0.03
NELFE-209ENST00000488426 ZNF804BA4D1E1 1349 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 PASKQ96RG2 1323 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 SNAP23O00161 211 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 NECTIN1Q15223 517 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 CIAPIN1Q6FI81 312 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 PODXL2Q9NZ53 605 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 GPRC5DQ9NZD1 345 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 HMG20BQ9P0W2 317 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 ANKIB1Q9P2G1 1089 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 RBM8AQ9Y5S9 174 aaKnown RBP15.23■□□□□ 0.03
NELFE-209ENST00000488426 UFL1O94874 794 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 CD2BP2O95400 341 aaKnown RBP15.23■□□□□ 0.03
NELFE-209ENST00000488426 CYP2E1P05181 493 aaPredicted RBP15.23■□□□□ 0.03
NELFE-209ENST00000488426 HIRAP54198 1017 aaPredicted RBP15.23■□□□□ 0.03
NELFE-209ENST00000488426 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 SPATA5Q8NB90 893 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 KLRG1Q96E93 195 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 SNX14Q9Y5W7 946 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 ADAMTSL1Q8N6G6 1762 aa15.23■□□□□ 0.03
NELFE-209ENST00000488426 PSMD14O00487 310 aa15.22■□□□□ 0.03
NELFE-209ENST00000488426 KCNJ4P48050 445 aa15.22■□□□□ 0.03
NELFE-209ENST00000488426 MCM2P49736 904 aa15.22■□□□□ 0.03
NELFE-209ENST00000488426 RASGRF1Q13972 1273 aa15.22■□□□□ 0.03
NELFE-209ENST00000488426 CAVIN4Q5BKX8 364 aa15.22■□□□□ 0.03
NELFE-209ENST00000488426 RNF20Q5VTR2 975 aa15.22■□□□□ 0.03
NELFE-209ENST00000488426 GNL3LQ9NVN8 582 aaKnown RBP15.22■□□□□ 0.03
NELFE-209ENST00000488426 SCN9AQ15858 1988 aa15.22■□□□□ 0.03
NELFE-209ENST00000488426 MYO5AQ9Y4I1 1855 aaKnown RBP15.21■□□□□ 0.03
NELFE-209ENST00000488426 ZBTB22O15209 634 aa15.21■□□□□ 0.03
NELFE-209ENST00000488426 ECE2O60344 883 aa15.21■□□□□ 0.03
NELFE-209ENST00000488426 ZKSCAN1P17029 563 aaPredicted RBP15.21■□□□□ 0.03
NELFE-209ENST00000488426 BCAMP50895 628 aa15.21■□□□□ 0.03
NELFE-209ENST00000488426 PNMA8AQ86V59 439 aaPredicted RBP15.21■□□□□ 0.03
NELFE-209ENST00000488426 APPBP2Q92624 585 aa15.21■□□□□ 0.03
NELFE-209ENST00000488426 SEC62Q99442 399 aaKnown RBP15.21■□□□□ 0.03
NELFE-209ENST00000488426 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
NELFE-209ENST00000488426 MAST3O60307 1309 aa15.21■□□□□ 0.02
NELFE-209ENST00000488426 LMOD1P29536 600 aaPredicted RBP15.2■□□□□ 0.02
NELFE-209ENST00000488426 NEK4P51957 841 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 CREB3L3Q68CJ9 461 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 DSCC1Q9BVC3 393 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 TM6SF1Q9BZW5 370 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 GGA1Q9UJY5 639 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 MYH13Q9UKX3 1938 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 SEMA3EO15041 775 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 EGFRP00533 1210 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 CHGBP05060 677 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 ADD2P35612 726 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 DLK2Q6UY11 383 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 TXNRD3Q86VQ6 643 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 TRPM4Q8TD43 1214 aa15.2■□□□□ 0.02
NELFE-209ENST00000488426 ZC3H12CQ9C0D7 883 aaKnown RBP15.2■□□□□ 0.02
NELFE-209ENST00000488426 PIH1D3Q9NQM4 214 aaKnown RBP15.2■□□□□ 0.02
NELFE-209ENST00000488426 TRAF5O00463 557 aa15.19■□□□□ 0.02
NELFE-209ENST00000488426 SLC27A2O14975 620 aa15.19■□□□□ 0.02
NELFE-209ENST00000488426 UBE3CQ15386 1083 aa15.19■□□□□ 0.02
NELFE-209ENST00000488426 CCDC129Q6ZRS4 1044 aa15.19■□□□□ 0.02
NELFE-209ENST00000488426 CNOT7Q9UIV1 285 aaKnown RBP15.19■□□□□ 0.02
NELFE-209ENST00000488426 LEMD3Q9Y2U8 911 aa15.19■□□□□ 0.02
NELFE-209ENST00000488426 XDHP47989 1333 aa15.19■□□□□ 0.02
NELFE-209ENST00000488426 PDS5AQ29RF7 1337 aaKnown RBP15.19■□□□□ 0.02
NELFE-209ENST00000488426 KLRK1P26718 216 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 TNIP1Q15025 636 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 TSGA10IPQ3SY00 556 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 SAMD7Q7Z3H4 446 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 FBXO33Q7Z6M2 555 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 OSBP2Q969R2 916 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 MKRN1Q9UHC7 482 aaKnown RBP15.18■□□□□ 0.02
NELFE-209ENST00000488426 IDH1O75874 414 aaKnown RBP15.18■□□□□ 0.02
NELFE-209ENST00000488426 GYG1P46976 350 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 MAP3K12Q12852 859 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 SLC9C2Q5TAH2 1124 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 USP50Q70EL3 339 aaPredicted RBP15.18■□□□□ 0.02
NELFE-209ENST00000488426 VPS37DQ86XT2 251 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 FAM84BQ96KN1 310 aaPredicted RBP15.18■□□□□ 0.02
NELFE-209ENST00000488426 EYA3Q99504 573 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 ADARB2Q9NS39 739 aaKnown RBP15.18■□□□□ 0.02
NELFE-209ENST00000488426 DENND2AQ9ULE3 1009 aa15.18■□□□□ 0.02
NELFE-209ENST00000488426 RPAP1Q9BWH6 1393 aaPredicted RBP15.17■□□□□ 0.02
NELFE-209ENST00000488426 M0R2C6 588 aa15.17■□□□□ 0.02
NELFE-209ENST00000488426 PSMA5P28066 241 aa15.17■□□□□ 0.02
NELFE-209ENST00000488426 KRT32Q14532 448 aa15.17■□□□□ 0.02
NELFE-209ENST00000488426 SLFNL1Q499Z3 407 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms