RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 ZFYVE28Q9HCC9 887 aa13.83□□□□□ -0.2
LCN2-206ENST00000488391 ZNF70Q9UC06 446 aaPredicted RBP13.83□□□□□ -0.2
LCN2-206ENST00000488391 RCAN3Q9UKA8 241 aa13.83□□□□□ -0.2
LCN2-206ENST00000488391 NEFLP07196 543 aa13.82□□□□□ -0.2
LCN2-206ENST00000488391 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.82□□□□□ -0.2
LCN2-206ENST00000488391 FAM43AQ8N2R8 423 aa13.82□□□□□ -0.2
LCN2-206ENST00000488391 SH3TC2Q8TF17 1288 aa13.82□□□□□ -0.2
LCN2-206ENST00000488391 CHMP3Q9Y3E7 222 aa13.82□□□□□ -0.2
LCN2-206ENST00000488391 SUPT16HQ9Y5B9 1047 aaKnown RBP13.82□□□□□ -0.2
LCN2-206ENST00000488391 LAMB1P07942 1786 aa13.81□□□□□ -0.2
LCN2-206ENST00000488391 TCP10L2B9ZVM9 353 aa13.81□□□□□ -0.2
LCN2-206ENST00000488391 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
LCN2-206ENST00000488391 GTF2A2P52657 109 aa13.81□□□□□ -0.2
LCN2-206ENST00000488391 MAP3K9P80192 1104 aa13.81□□□□□ -0.2
LCN2-206ENST00000488391 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
LCN2-206ENST00000488391 TNFAIP1Q13829 316 aa13.81□□□□□ -0.2
LCN2-206ENST00000488391 TEPSINQ96N21 525 aa13.81□□□□□ -0.2
LCN2-206ENST00000488391 ARHGAP39Q9C0H5 1083 aa13.81□□□□□ -0.2
LCN2-206ENST00000488391 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
LCN2-206ENST00000488391 FOXO4P98177 505 aa13.8□□□□□ -0.2
LCN2-206ENST00000488391 FLIIQ13045 1269 aa13.8□□□□□ -0.2
LCN2-206ENST00000488391 FKBP5Q13451 457 aaPredicted RBP13.8□□□□□ -0.2
LCN2-206ENST00000488391 VGLL4Q14135 290 aa13.8□□□□□ -0.2
LCN2-206ENST00000488391 TWISTNBQ3B726 338 aaPredicted RBP13.8□□□□□ -0.2
LCN2-206ENST00000488391 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
LCN2-206ENST00000488391 LINS1Q8NG48 757 aa13.8□□□□□ -0.2
LCN2-206ENST00000488391 DNAAF4Q8WXU2 420 aa13.8□□□□□ -0.2
LCN2-206ENST00000488391 OTUD5Q96G74 571 aa13.8□□□□□ -0.2
LCN2-206ENST00000488391 ZNF594Q96JF6 807 aaPredicted RBP13.8□□□□□ -0.2
LCN2-206ENST00000488391 TMEM39BQ9GZU3 492 aa13.8□□□□□ -0.2
LCN2-206ENST00000488391 TTF2Q9UNY4 1162 aaKnown RBP13.8□□□□□ -0.2
LCN2-206ENST00000488391 FANCIQ9NVI1 1328 aa13.8□□□□□ -0.2
LCN2-206ENST00000488391 MFSD14BQ5SR56 506 aa13.79□□□□□ -0.2
LCN2-206ENST00000488391 DZIP1LQ8IYY4 767 aaKnown RBP13.79□□□□□ -0.2
LCN2-206ENST00000488391 CSADQ9Y600 493 aa13.79□□□□□ -0.2
LCN2-206ENST00000488391 OTOFQ9HC10 1997 aa13.78□□□□□ -0.2
LCN2-206ENST00000488391 BRCA2P51587 3418 aa13.78□□□□□ -0.2
LCN2-206ENST00000488391 GYG1P46976 350 aa13.78□□□□□ -0.2
LCN2-206ENST00000488391 KIF22Q14807 665 aa13.78□□□□□ -0.2
LCN2-206ENST00000488391 ERICH6BQ5W0A0 696 aa13.78□□□□□ -0.2
LCN2-206ENST00000488391 LMBR1LQ6UX01 489 aa13.78□□□□□ -0.2
LCN2-206ENST00000488391 CHRDL2Q6WN34 429 aa13.78□□□□□ -0.2
LCN2-206ENST00000488391 LDHAL6AQ6ZMR3 332 aa13.78□□□□□ -0.2
LCN2-206ENST00000488391 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.78□□□□□ -0.2
LCN2-206ENST00000488391 TDRD7Q8NHU6 1098 aaKnown RBP13.78□□□□□ -0.2
LCN2-206ENST00000488391 DPF3Q92784 378 aa13.78□□□□□ -0.2
LCN2-206ENST00000488391 SERPINA10Q9UK55 444 aa13.78□□□□□ -0.2
LCN2-206ENST00000488391 FAM205AQ6ZU69 1335 aa13.78□□□□□ -0.2
LCN2-206ENST00000488391 BTBD19C9JJ37 291 aa13.77□□□□□ -0.21
LCN2-206ENST00000488391 TLR2O60603 784 aa13.77□□□□□ -0.21
LCN2-206ENST00000488391 WDHD1O75717 1129 aaPredicted RBP13.77□□□□□ -0.21
LCN2-206ENST00000488391 CRKP46108 304 aa13.77□□□□□ -0.21
LCN2-206ENST00000488391 TNNI2P48788 182 aa13.77□□□□□ -0.21
LCN2-206ENST00000488391 LACTBP83111 547 aaPredicted RBP13.77□□□□□ -0.21
LCN2-206ENST00000488391 CCDC57Q2TAC2 916 aa13.77□□□□□ -0.21
LCN2-206ENST00000488391 TAF7LQ5H9L4 462 aa13.77□□□□□ -0.21
LCN2-206ENST00000488391 EPHA10Q5JZY3 1008 aa13.77□□□□□ -0.21
LCN2-206ENST00000488391 CNNM1Q9NRU3 951 aa13.77□□□□□ -0.21
LCN2-206ENST00000488391 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
LCN2-206ENST00000488391 CETPP11597 493 aa13.76□□□□□ -0.21
LCN2-206ENST00000488391 HIBADHP31937 336 aaKnown RBP13.76□□□□□ -0.21
LCN2-206ENST00000488391 CACNB3P54284 484 aa13.76□□□□□ -0.21
LCN2-206ENST00000488391 MTFR1Q15390 333 aa13.76□□□□□ -0.21
LCN2-206ENST00000488391 GRIK5Q16478 980 aa13.76□□□□□ -0.21
LCN2-206ENST00000488391 ZKSCAN4Q969J2 545 aaPredicted RBP13.76□□□□□ -0.21
LCN2-206ENST00000488391 RBM27Q9P2N5 1060 aaKnown RBP13.76□□□□□ -0.21
LCN2-206ENST00000488391 SPDYE5A6NIY4 337 aa13.75□□□□□ -0.21
LCN2-206ENST00000488391 F6X3S4 739 aa13.75□□□□□ -0.21
LCN2-206ENST00000488391 RRP1P56182 461 aaKnown RBP13.75□□□□□ -0.21
LCN2-206ENST00000488391 FAM84BQ96KN1 310 aaPredicted RBP13.75□□□□□ -0.21
LCN2-206ENST00000488391 IQSEC3Q9UPP2 1182 aaPredicted RBP13.75□□□□□ -0.21
LCN2-206ENST00000488391 SNCAIPQ9Y6H5 919 aa13.75□□□□□ -0.21
LCN2-206ENST00000488391 A0A1B0GUL6 1792 aa13.74□□□□□ -0.21
LCN2-206ENST00000488391 IRF6O14896 467 aa13.74□□□□□ -0.21
LCN2-206ENST00000488391 EXOSC9Q06265 439 aaKnown RBP13.74□□□□□ -0.21
LCN2-206ENST00000488391 UBE4AQ14139 1066 aa13.74□□□□□ -0.21
LCN2-206ENST00000488391 ERO1BQ86YB8 467 aa13.74□□□□□ -0.21
LCN2-206ENST00000488391 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.74□□□□□ -0.21
LCN2-206ENST00000488391 SHISA4Q96DD7 197 aa13.74□□□□□ -0.21
LCN2-206ENST00000488391 CPA4Q9UI42 421 aa13.74□□□□□ -0.21
LCN2-206ENST00000488391 GNRH1P01148 92 aa13.73□□□□□ -0.21
LCN2-206ENST00000488391 CTGFP29279 349 aa13.73□□□□□ -0.21
LCN2-206ENST00000488391 PSMC4P43686 418 aa13.73□□□□□ -0.21
LCN2-206ENST00000488391 PRMT2P55345 433 aa13.73□□□□□ -0.21
LCN2-206ENST00000488391 CHAF1AQ13111 956 aaPredicted RBP13.73□□□□□ -0.21
LCN2-206ENST00000488391 SNAPC2Q13487 334 aa13.73□□□□□ -0.21
LCN2-206ENST00000488391 BEND3Q5T5X7 828 aa13.73□□□□□ -0.21
LCN2-206ENST00000488391 WRNIP1Q96S55 665 aa13.73□□□□□ -0.21
LCN2-206ENST00000488391 PUS3Q9BZE2 481 aaKnown RBP13.73□□□□□ -0.21
LCN2-206ENST00000488391 RARSP54136 660 aaKnown RBP13.72□□□□□ -0.21
LCN2-206ENST00000488391 C17orf99Q6UX52 265 aa13.72□□□□□ -0.21
LCN2-206ENST00000488391 TRIM47Q96LD4 638 aa13.72□□□□□ -0.21
LCN2-206ENST00000488391 ZCCHC17Q9NP64 241 aaKnown RBP13.72□□□□□ -0.21
LCN2-206ENST00000488391 BIN2Q9UBW5 565 aaPredicted RBP13.72□□□□□ -0.21
LCN2-206ENST00000488391 VAMP4O75379 141 aa13.71□□□□□ -0.21
LCN2-206ENST00000488391 FRAT2O75474 233 aaPredicted RBP13.71□□□□□ -0.21
LCN2-206ENST00000488391 FMNL1O95466 1100 aaPredicted RBP13.71□□□□□ -0.21
LCN2-206ENST00000488391 OSBPP22059 807 aa13.71□□□□□ -0.21
LCN2-206ENST00000488391 GRK4P32298 578 aa13.71□□□□□ -0.21
LCN2-206ENST00000488391 MIGA2Q7L4E1 593 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms