RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 DNAJC2Q99543 621 aaKnown RBP13.5□□□□□ -0.25
UBE4B-210ENST00000488228 ZBTB47Q9UFB7 747 aaPredicted RBP13.5□□□□□ -0.25
UBE4B-210ENST00000488228 HDAC9Q9UKV0 1011 aa13.5□□□□□ -0.25
UBE4B-210ENST00000488228 NAV1Q8NEY1 1877 aa13.49□□□□□ -0.25
UBE4B-210ENST00000488228 MAST3O60307 1309 aa13.49□□□□□ -0.25
UBE4B-210ENST00000488228 CYP2E1P05181 493 aaPredicted RBP13.49□□□□□ -0.25
UBE4B-210ENST00000488228 LDHBP07195 334 aaKnown RBP13.49□□□□□ -0.25
UBE4B-210ENST00000488228 MX1P20591 662 aa13.49□□□□□ -0.25
UBE4B-210ENST00000488228 NUCB1Q02818 461 aa13.49□□□□□ -0.25
UBE4B-210ENST00000488228 CFAP100Q494V2 611 aa13.49□□□□□ -0.25
UBE4B-210ENST00000488228 PNMA8AQ86V59 439 aaPredicted RBP13.49□□□□□ -0.25
UBE4B-210ENST00000488228 LDHDQ86WU2 507 aa13.49□□□□□ -0.25
UBE4B-210ENST00000488228 EDC3Q96F86 508 aaKnown RBP13.49□□□□□ -0.25
UBE4B-210ENST00000488228 ANTXR1Q9H6X2 564 aa13.49□□□□□ -0.25
UBE4B-210ENST00000488228 PIH1D3Q9NQM4 214 aaKnown RBP13.49□□□□□ -0.25
UBE4B-210ENST00000488228 ECHDC1Q9NTX5 307 aa13.49□□□□□ -0.25
UBE4B-210ENST00000488228 GGA3Q9NZ52 723 aa13.49□□□□□ -0.25
UBE4B-210ENST00000488228 CLEC11AQ9Y240 323 aa13.49□□□□□ -0.25
UBE4B-210ENST00000488228 ATP5JP18859 108 aa13.48□□□□□ -0.25
UBE4B-210ENST00000488228 CRKP46108 304 aa13.48□□□□□ -0.25
UBE4B-210ENST00000488228 RBM5P52756 815 aaKnown RBP eCLIP13.48□□□□□ -0.25
UBE4B-210ENST00000488228 NBPF9Q3BBW0 867 aa13.48□□□□□ -0.25
UBE4B-210ENST00000488228 MAP1SQ66K74 1059 aaPredicted RBP13.48□□□□□ -0.25
UBE4B-210ENST00000488228 CHD1LQ86WJ1 897 aa13.48□□□□□ -0.25
UBE4B-210ENST00000488228 DZIP1Q86YF9 867 aaKnown RBP13.48□□□□□ -0.25
UBE4B-210ENST00000488228 ZGPATQ8N5A5 531 aaKnown RBP13.48□□□□□ -0.25
UBE4B-210ENST00000488228 ZNF384Q8TF68 577 aa13.48□□□□□ -0.25
UBE4B-210ENST00000488228 GPATCH3Q96I76 525 aa13.48□□□□□ -0.25
UBE4B-210ENST00000488228 BOLA2Q9H3K6 86 aa13.48□□□□□ -0.25
UBE4B-210ENST00000488228 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 GOLIM4O00461 696 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 WNT10BO00744 389 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 TOMM70O94826 608 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 MECOMQ03112 1051 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 DLGAP5Q15398 846 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 ERICH6Q7L0X2 663 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
UBE4B-210ENST00000488228 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.47□□□□□ -0.25
UBE4B-210ENST00000488228 TEKT1Q969V4 418 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 ZBED3Q96IU2 234 aaPredicted RBP13.47□□□□□ -0.25
UBE4B-210ENST00000488228 RAI14Q9P0K7 980 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 SCAF8Q9UPN6 1271 aaKnown RBP13.47□□□□□ -0.25
UBE4B-210ENST00000488228 SUGT1Q9Y2Z0 365 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 DAGLAQ9Y4D2 1042 aa13.47□□□□□ -0.25
UBE4B-210ENST00000488228 TTC41PQ6P2S7 1318 aa13.46□□□□□ -0.25
UBE4B-210ENST00000488228 OTOFQ9HC10 1997 aa13.46□□□□□ -0.25
UBE4B-210ENST00000488228 CLRN2A0PK11 232 aa13.46□□□□□ -0.25
UBE4B-210ENST00000488228 IDH1O75874 414 aaKnown RBP13.46□□□□□ -0.25
UBE4B-210ENST00000488228 ANGEL2Q5VTE6 544 aaKnown RBP13.46□□□□□ -0.25
UBE4B-210ENST00000488228 SPTY2D1Q68D10 685 aaPredicted RBP13.46□□□□□ -0.25
UBE4B-210ENST00000488228 CHADLQ6NUI6 762 aa13.46□□□□□ -0.25
UBE4B-210ENST00000488228 SMC1BQ8NDV3 1235 aa13.46□□□□□ -0.25
UBE4B-210ENST00000488228 PI4K2BQ8TCG2 481 aa13.46□□□□□ -0.25
UBE4B-210ENST00000488228 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.25
UBE4B-210ENST00000488228 HAUS7Q99871 368 aa13.46□□□□□ -0.25
UBE4B-210ENST00000488228 LRP2BPQ9P2M1 347 aa13.46□□□□□ -0.25
UBE4B-210ENST00000488228 SERPINA10Q9UK55 444 aa13.46□□□□□ -0.25
UBE4B-210ENST00000488228 DDX60LQ5H9U9 1706 aaKnown RBP13.46□□□□□ -0.25
UBE4B-210ENST00000488228 MROH7-TTC4A0A0A0MT08 1334 aa13.45□□□□□ -0.26
UBE4B-210ENST00000488228 ADM5C9JUS6 153 aa13.45□□□□□ -0.26
UBE4B-210ENST00000488228 MAP4K4O95819 1239 aaPredicted RBP13.45□□□□□ -0.26
UBE4B-210ENST00000488228 PDE4AP27815 886 aa13.45□□□□□ -0.26
UBE4B-210ENST00000488228 MTMR14Q8NCE2 650 aa13.45□□□□□ -0.26
UBE4B-210ENST00000488228 NSUN4Q96CB9 384 aaKnown RBP13.45□□□□□ -0.26
UBE4B-210ENST00000488228 PRMT6Q96LA8 375 aaPredicted RBP13.45□□□□□ -0.26
UBE4B-210ENST00000488228 GLIS2Q9BZE0 524 aaPredicted RBP13.45□□□□□ -0.26
UBE4B-210ENST00000488228 PAG1Q9NWQ8 432 aa13.45□□□□□ -0.26
UBE4B-210ENST00000488228 MYH1P12882 1939 aa13.45□□□□□ -0.26
UBE4B-210ENST00000488228 GAKO14976 1311 aa13.44□□□□□ -0.26
UBE4B-210ENST00000488228 MMP14P50281 582 aa13.44□□□□□ -0.26
UBE4B-210ENST00000488228 PDE1AP54750 535 aa13.44□□□□□ -0.26
UBE4B-210ENST00000488228 HDLBPQ00341 1268 aaKnown RBP13.44□□□□□ -0.26
UBE4B-210ENST00000488228 DLK2Q6UY11 383 aa13.44□□□□□ -0.26
UBE4B-210ENST00000488228 CENPQQ7L2Z9 268 aaPredicted RBP13.44□□□□□ -0.26
UBE4B-210ENST00000488228 ADGRA1Q86SQ6 560 aa13.44□□□□□ -0.26
UBE4B-210ENST00000488228 SKAP1Q86WV1 359 aa13.44□□□□□ -0.26
UBE4B-210ENST00000488228 ZDHHC15Q96MV8 337 aa13.44□□□□□ -0.26
UBE4B-210ENST00000488228 VEZTQ9HBM0 779 aa13.44□□□□□ -0.26
UBE4B-210ENST00000488228 PAPPA2Q9BXP8 1791 aa13.44□□□□□ -0.26
UBE4B-210ENST00000488228 SIPA1L1O43166 1804 aa13.43□□□□□ -0.26
UBE4B-210ENST00000488228 BAZ2AQ9UIF9 1905 aaKnown RBP13.43□□□□□ -0.26
UBE4B-210ENST00000488228 TRAF5O00463 557 aa13.43□□□□□ -0.26
UBE4B-210ENST00000488228 ERC2O15083 957 aa13.43□□□□□ -0.26
UBE4B-210ENST00000488228 GLRX3O76003 335 aaKnown RBP13.43□□□□□ -0.26
UBE4B-210ENST00000488228 CACNB3P54284 484 aa13.43□□□□□ -0.26
UBE4B-210ENST00000488228 FMR1Q06787 632 aaKnown RBP eCLIP13.43□□□□□ -0.263e-7■□□□□ 10.6
UBE4B-210ENST00000488228 SPDYE2Q495Y8 402 aa13.43□□□□□ -0.26
UBE4B-210ENST00000488228 APOBEC3HQ6NTF7 200 aaKnown RBP13.43□□□□□ -0.26
UBE4B-210ENST00000488228 HHIPL2Q6UWX4 724 aa13.43□□□□□ -0.26
UBE4B-210ENST00000488228 KRT26Q7Z3Y9 468 aa13.43□□□□□ -0.26
UBE4B-210ENST00000488228 ZC3H15Q8WU90 426 aaKnown RBP13.43□□□□□ -0.26
UBE4B-210ENST00000488228 TDRD3Q9H7E2 651 aaKnown RBP13.43□□□□□ -0.26
UBE4B-210ENST00000488228 STAP2Q9UGK3 403 aa13.43□□□□□ -0.26
UBE4B-210ENST00000488228 PGAP2Q9UHJ9 254 aa13.43□□□□□ -0.26
UBE4B-210ENST00000488228 RFX7Q2KHR2 1363 aa13.43□□□□□ -0.26
UBE4B-210ENST00000488228 PITPNM2Q9BZ72 1349 aa13.42□□□□□ -0.26
UBE4B-210ENST00000488228 MYO1BO43795 1136 aa13.42□□□□□ -0.26
UBE4B-210ENST00000488228 CHGBP05060 677 aa13.42□□□□□ -0.26
UBE4B-210ENST00000488228 PDE6AP16499 860 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms