RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ERICH6BQ5W0A0 696 aa19.17■□□□□ 0.66
C9orf3-219ENST00000488186 CHD1LQ86WJ1 897 aa19.17■□□□□ 0.66
C9orf3-219ENST00000488186 DNAJC2Q99543 621 aaKnown RBP19.17■□□□□ 0.66
C9orf3-219ENST00000488186 BOLA2Q9H3K6 86 aa19.17■□□□□ 0.66
C9orf3-219ENST00000488186 MYH13Q9UKX3 1938 aa19.16■□□□□ 0.66
C9orf3-219ENST00000488186 ERC2O15083 957 aa19.16■□□□□ 0.66
C9orf3-219ENST00000488186 POTEIP0CG38 1075 aa19.16■□□□□ 0.66
C9orf3-219ENST00000488186 POTEJP0CG39 1038 aa19.16■□□□□ 0.66
C9orf3-219ENST00000488186 ATP5JP18859 108 aa19.16■□□□□ 0.66
C9orf3-219ENST00000488186 CFAP100Q494V2 611 aa19.16■□□□□ 0.66
C9orf3-219ENST00000488186 TBC1D9Q6ZT07 1266 aa19.16■□□□□ 0.66
C9orf3-219ENST00000488186 SLF2Q8IX21 1173 aa19.16■□□□□ 0.66
C9orf3-219ENST00000488186 TRPM4Q8TD43 1214 aa19.16■□□□□ 0.66
C9orf3-219ENST00000488186 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.16■□□□□ 0.66
C9orf3-219ENST00000488186 TEKT1Q969V4 418 aa19.16■□□□□ 0.66
C9orf3-219ENST00000488186 SERPINA10Q9UK55 444 aa19.16■□□□□ 0.66
C9orf3-219ENST00000488186 MYO1BO43795 1136 aa19.15■□□□□ 0.66
C9orf3-219ENST00000488186 ITGBL1O95965 494 aaPredicted RBP19.15■□□□□ 0.66
C9orf3-219ENST00000488186 MX1P20591 662 aa19.15■□□□□ 0.66
C9orf3-219ENST00000488186 PRDX5P30044 214 aa19.15■□□□□ 0.66
C9orf3-219ENST00000488186 TTF1Q15361 905 aaPredicted RBP19.15■□□□□ 0.66
C9orf3-219ENST00000488186 GRIK5Q16478 980 aa19.15■□□□□ 0.66
C9orf3-219ENST00000488186 COL1A1P02452 1464 aaPredicted RBP19.15■□□□□ 0.66
C9orf3-219ENST00000488186 CYP2E1P05181 493 aaPredicted RBP19.14■□□□□ 0.65
C9orf3-219ENST00000488186 CRKP46108 304 aa19.14■□□□□ 0.65
C9orf3-219ENST00000488186 HIRAP54198 1017 aaPredicted RBP19.14■□□□□ 0.65
C9orf3-219ENST00000488186 GSTO1P78417 241 aa19.14■□□□□ 0.65
C9orf3-219ENST00000488186 HDLBPQ00341 1268 aaKnown RBP19.14■□□□□ 0.65
C9orf3-219ENST00000488186 DCPSQ96C86 337 aaKnown RBP19.14■□□□□ 0.65
C9orf3-219ENST00000488186 NDUFB9Q9Y6M9 179 aa19.14■□□□□ 0.65
C9orf3-219ENST00000488186 TTC41PQ6P2S7 1318 aa19.14■□□□□ 0.65
C9orf3-219ENST00000488186 PASKQ96RG2 1323 aa19.14■□□□□ 0.65
C9orf3-219ENST00000488186 POLR2AP24928 1970 aaKnown RBP19.13■□□□□ 0.65
C9orf3-219ENST00000488186 GOLIM4O00461 696 aa19.13■□□□□ 0.65
C9orf3-219ENST00000488186 EGFRP00533 1210 aa19.13■□□□□ 0.65
C9orf3-219ENST00000488186 LDHCP07864 332 aa19.13■□□□□ 0.65
C9orf3-219ENST00000488186 APLP1P51693 650 aa19.13■□□□□ 0.65
C9orf3-219ENST00000488186 CENPQQ7L2Z9 268 aaPredicted RBP19.13■□□□□ 0.65
C9orf3-219ENST00000488186 CNTROBQ8N137 903 aa19.13■□□□□ 0.65
C9orf3-219ENST00000488186 MTMR14Q8NCE2 650 aa19.13■□□□□ 0.65
C9orf3-219ENST00000488186 MRIQ9BWK5 157 aa19.13■□□□□ 0.65
C9orf3-219ENST00000488186 IDH1O75874 414 aaKnown RBP19.12■□□□□ 0.65
C9orf3-219ENST00000488186 GLRX3O76003 335 aaKnown RBP19.12■□□□□ 0.65
C9orf3-219ENST00000488186 MAP3K12Q12852 859 aa19.12■□□□□ 0.65
C9orf3-219ENST00000488186 NBPF9Q3BBW0 867 aa19.12■□□□□ 0.65
C9orf3-219ENST00000488186 TSHZ3Q63HK5 1081 aa19.12■□□□□ 0.65
C9orf3-219ENST00000488186 HHIPL2Q6UWX4 724 aa19.12■□□□□ 0.65
C9orf3-219ENST00000488186 OTUD7AQ8TE49 926 aaPredicted RBP19.12■□□□□ 0.65
C9orf3-219ENST00000488186 HAUS7Q99871 368 aa19.12■□□□□ 0.65
C9orf3-219ENST00000488186 PAG1Q9NWQ8 432 aa19.12■□□□□ 0.65
C9orf3-219ENST00000488186 PPP4R2Q9NY27 417 aa19.12■□□□□ 0.65
C9orf3-219ENST00000488186 PITPNM2Q9BZ72 1349 aa19.11■□□□□ 0.65
C9orf3-219ENST00000488186 WNT10BO00744 389 aa19.11■□□□□ 0.65
C9orf3-219ENST00000488186 MECOMQ03112 1051 aa19.11■□□□□ 0.65
C9orf3-219ENST00000488186 NAA16Q6N069 864 aaPredicted RBP19.11■□□□□ 0.65
C9orf3-219ENST00000488186 NOL10Q9BSC4 688 aaKnown RBP19.11■□□□□ 0.65
C9orf3-219ENST00000488186 PIH1D3Q9NQM4 214 aaKnown RBP19.11■□□□□ 0.65
C9orf3-219ENST00000488186 TRPM7Q96QT4 1865 aa19.1■□□□□ 0.65
C9orf3-219ENST00000488186 SPDYE2BA6NHP3 402 aa19.1■□□□□ 0.65
C9orf3-219ENST00000488186 IGSF3O75054 1194 aa19.1■□□□□ 0.65
C9orf3-219ENST00000488186 SPDYE6P0CI01 402 aa19.1■□□□□ 0.65
C9orf3-219ENST00000488186 DIXDC1Q155Q3 683 aa19.1■□□□□ 0.65
C9orf3-219ENST00000488186 ANGEL2Q5VTE6 544 aaKnown RBP19.1■□□□□ 0.65
C9orf3-219ENST00000488186 MAP1SQ66K74 1059 aaPredicted RBP19.1■□□□□ 0.65
C9orf3-219ENST00000488186 CDC37L1Q7L3B6 337 aa19.1■□□□□ 0.65
C9orf3-219ENST00000488186 ZBED3Q96IU2 234 aaPredicted RBP19.1■□□□□ 0.65
C9orf3-219ENST00000488186 PRMT6Q96LA8 375 aaPredicted RBP19.1■□□□□ 0.65
C9orf3-219ENST00000488186 ANTXR1Q9H6X2 564 aa19.1■□□□□ 0.65
C9orf3-219ENST00000488186 PDE1AP54750 535 aa19.09■□□□□ 0.65
C9orf3-219ENST00000488186 SULF1Q8IWU6 871 aa19.09■□□□□ 0.65
C9orf3-219ENST00000488186 NSUN4Q96CB9 384 aaKnown RBP19.09■□□□□ 0.65
C9orf3-219ENST00000488186 ZDHHC15Q96MV8 337 aa19.09■□□□□ 0.65
C9orf3-219ENST00000488186 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.09■□□□□ 0.65
C9orf3-219ENST00000488186 VEZTQ9HBM0 779 aa19.09■□□□□ 0.65
C9orf3-219ENST00000488186 GGA3Q9NZ52 723 aa19.09■□□□□ 0.65
C9orf3-219ENST00000488186 TMOD2Q9NZR1 351 aa19.09■□□□□ 0.65
C9orf3-219ENST00000488186 TDRD3Q9H7E2 651 aaKnown RBP19.08■□□□□ 0.64
C9orf3-219ENST00000488186 STAP2Q9UGK3 403 aa19.08■□□□□ 0.64
C9orf3-219ENST00000488186 PCDHAC2Q9Y5I4 1007 aa19.08■□□□□ 0.64
C9orf3-219ENST00000488186 ECM29Q5VYK3 1845 aa19.08■□□□□ 0.64
C9orf3-219ENST00000488186 CLRN2A0PK11 232 aa19.07■□□□□ 0.64
C9orf3-219ENST00000488186 MAP4K4O95819 1239 aaPredicted RBP19.07■□□□□ 0.64
C9orf3-219ENST00000488186 ZSCAN25Q6NSZ9 544 aa19.07■□□□□ 0.64
C9orf3-219ENST00000488186 KRT26Q7Z3Y9 468 aa19.07■□□□□ 0.64
C9orf3-219ENST00000488186 USP48Q86UV5 1035 aa19.07■□□□□ 0.64
C9orf3-219ENST00000488186 MAGEB6Q8N7X4 407 aa19.07■□□□□ 0.64
C9orf3-219ENST00000488186 EDC3Q96F86 508 aaKnown RBP19.07■□□□□ 0.64
C9orf3-219ENST00000488186 DAGLAQ9Y4D2 1042 aa19.07■□□□□ 0.64
C9orf3-219ENST00000488186 CEP350Q5VT06 3117 aa19.07■□□□□ 0.64
C9orf3-219ENST00000488186 ASTN2O75129 1339 aaPredicted RBP19.06■□□□□ 0.64
C9orf3-219ENST00000488186 AKAP11Q9UKA4 1901 aa19.06■□□□□ 0.64
C9orf3-219ENST00000488186 BAG3O95817 575 aa19.06■□□□□ 0.64
C9orf3-219ENST00000488186 CYP7A1P22680 504 aa19.06■□□□□ 0.64
C9orf3-219ENST00000488186 LRRFIP1Q32MZ4 808 aaKnown RBP19.06■□□□□ 0.64
C9orf3-219ENST00000488186 SLC9C2Q5TAH2 1124 aa19.06■□□□□ 0.64
C9orf3-219ENST00000488186 TMED8Q6PL24 325 aaPredicted RBP19.06■□□□□ 0.64
C9orf3-219ENST00000488186 APOBEC3FQ8IUX4 373 aaKnown RBP19.06■□□□□ 0.64
C9orf3-219ENST00000488186 PLEKHM2Q8IWE5 1019 aa19.06■□□□□ 0.64
C9orf3-219ENST00000488186 PI4K2BQ8TCG2 481 aa19.06■□□□□ 0.64
C9orf3-219ENST00000488186 FAM163AQ96GL9 167 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms