RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 WWC2Q6AWC2 1192 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 SYNE3Q6ZMZ3 975 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 COPS6Q7L5N1 327 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 PARD6BQ9BYG5 372 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 C19orf44Q9H6X5 657 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 KCND1Q9NSA2 647 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 KDM3BQ7LBC6 1761 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 HEG1Q9ULI3 1381 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 MROH7-TTC4A0A0A0MT08 1334 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
COL16A1-214ENST00000488128 LRRFIP1Q32MZ4 808 aaKnown RBP16.38■□□□□ 0.21
COL16A1-214ENST00000488128 TOGARAM2Q6ZUX3 1019 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 ZNF496Q96IT1 587 aaPredicted RBP16.38■□□□□ 0.21
COL16A1-214ENST00000488128 CLIC6Q96NY7 704 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 RTEL1Q9NZ71 1219 aa16.38■□□□□ 0.21
COL16A1-214ENST00000488128 PPP2R2CQ9Y2T4 447 aa16.37■□□□□ 0.21
COL16A1-214ENST00000488128 A0A0U1RQJ8 604 aa16.37■□□□□ 0.21
COL16A1-214ENST00000488128 EFCAB8A8MWE9 144 aa16.37■□□□□ 0.21
COL16A1-214ENST00000488128 CASQ1P31415 396 aa16.37■□□□□ 0.21
COL16A1-214ENST00000488128 PPP2R3AQ06190 1150 aa16.37■□□□□ 0.21
COL16A1-214ENST00000488128 ATRIPQ8WXE1 791 aa16.37■□□□□ 0.21
COL16A1-214ENST00000488128 SLC52A2Q9HAB3 445 aa16.37■□□□□ 0.21
COL16A1-214ENST00000488128 SUGCTQ9HAC7 445 aa16.37■□□□□ 0.21
COL16A1-214ENST00000488128 PUF60Q9UHX1 559 aaKnown RBP16.37■□□□□ 0.21
COL16A1-214ENST00000488128 PHLPP2Q6ZVD8 1323 aa16.37■□□□□ 0.21
COL16A1-214ENST00000488128 PTPN12Q05209 780 aaKnown RBP16.36■□□□□ 0.21
COL16A1-214ENST00000488128 DHX58Q96C10 678 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 ARFGAP3Q9NP61 516 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 C1orf167Q5SNV9 1468 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 H3BQF6 201 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 FOXN1O15353 648 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 TATP17735 454 aaPredicted RBP16.36■□□□□ 0.21
COL16A1-214ENST00000488128 EXOSC10Q01780 885 aaKnown RBP16.36■□□□□ 0.21
COL16A1-214ENST00000488128 MTF1Q14872 753 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 MYSM1Q5VVJ2 828 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 NCAPD2Q15021 1401 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 NEURL1BA8MQ27 555 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 PHACTR2O75167 634 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 HSPD1P10809 573 aaKnown RBP16.36■□□□□ 0.21
COL16A1-214ENST00000488128 PHKG2P15735 406 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 ATF3P18847 181 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 NEXNQ0ZGT2 675 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 GCKRQ14397 625 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 LZTFL1Q9NQ48 299 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 ADAM21Q9UKJ8 722 aa16.36■□□□□ 0.21
COL16A1-214ENST00000488128 LMO7Q8WWI1 1683 aa16.35■□□□□ 0.21
COL16A1-214ENST00000488128 ZNF827Q17R98 1081 aa16.35■□□□□ 0.21
COL16A1-214ENST00000488128 TXLNBQ8N3L3 684 aa16.35■□□□□ 0.21
COL16A1-214ENST00000488128 SLIT3O75094 1523 aa16.35■□□□□ 0.21
COL16A1-214ENST00000488128 CPLX1O14810 134 aa16.35■□□□□ 0.21
COL16A1-214ENST00000488128 CDC27P30260 824 aa16.35■□□□□ 0.21
COL16A1-214ENST00000488128 SYKP43405 635 aa16.35■□□□□ 0.21
COL16A1-214ENST00000488128 CCDC158Q5M9N0 1113 aa16.35■□□□□ 0.21
COL16A1-214ENST00000488128 TRMT44Q8IYL2 757 aaKnown RBP16.35■□□□□ 0.21
COL16A1-214ENST00000488128 HDAC5Q9UQL6 1122 aa16.35■□□□□ 0.21
COL16A1-214ENST00000488128 SALL1Q9NSC2 1324 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 KLF18A0A0U1RQI7 1052 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 GOLGA8BA8MQT2 603 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 MYO1CO00159 1063 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 N4BP1O75113 896 aaKnown RBP16.34■□□□□ 0.21
COL16A1-214ENST00000488128 JCADQ9P266 1359 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 PDE4BQ07343 736 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 FOXR1Q6PIV2 292 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 KCNG4Q8TDN1 519 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 CCDC12Q8WUD4 166 aaPredicted RBP16.34■□□□□ 0.21
COL16A1-214ENST00000488128 CPLX3Q8WVH0 158 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 FUT8Q9BYC5 575 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 VPS18Q9P253 973 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 DENND2AQ9ULE3 1009 aa16.34■□□□□ 0.21
COL16A1-214ENST00000488128 A0A1W2PQ27 194 aa16.33■□□□□ 0.21
COL16A1-214ENST00000488128 A0A1W2PQ64 194 aa16.33■□□□□ 0.21
COL16A1-214ENST00000488128 A0A1W2PQD8 194 aa16.33■□□□□ 0.21
COL16A1-214ENST00000488128 GPS2Q13227 327 aa16.33■□□□□ 0.21
COL16A1-214ENST00000488128 AXDND1Q5T1B0 1012 aaPredicted RBP16.33■□□□□ 0.21
COL16A1-214ENST00000488128 ANO1Q5XXA6 986 aa16.33■□□□□ 0.21
COL16A1-214ENST00000488128 BAG1Q99933 345 aaPredicted RBP16.33■□□□□ 0.21
COL16A1-214ENST00000488128 PLEKHA4Q9H4M7 779 aa16.33■□□□□ 0.21
COL16A1-214ENST00000488128 INTS13Q9NVM9 706 aa16.33■□□□□ 0.21
COL16A1-214ENST00000488128 KDM6AO15550 1401 aaPredicted RBP16.33■□□□□ 0.21
COL16A1-214ENST00000488128 UBE2Q2LH0YL09 131 aa16.33■□□□□ 0.2
COL16A1-214ENST00000488128 HMGB1P09429 215 aaKnown RBP16.33■□□□□ 0.2
COL16A1-214ENST00000488128 MYL5Q02045 173 aa16.33■□□□□ 0.2
COL16A1-214ENST00000488128 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.2
COL16A1-214ENST00000488128 FBXO18Q8NFZ0 1043 aa16.33■□□□□ 0.2
COL16A1-214ENST00000488128 HAUS7Q99871 368 aa16.33■□□□□ 0.2
COL16A1-214ENST00000488128 N4BP2Q86UW6 1770 aaPredicted RBP16.33■□□□□ 0.2
COL16A1-214ENST00000488128 CYP27B1O15528 508 aa16.32■□□□□ 0.2
COL16A1-214ENST00000488128 LONRF2Q1L5Z9 754 aa16.32■□□□□ 0.2
COL16A1-214ENST00000488128 FOXP4Q8IVH2 680 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-214ENST00000488128 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
COL16A1-214ENST00000488128 PDE11AQ9HCR9 933 aa16.32■□□□□ 0.2
COL16A1-214ENST00000488128 PAG1Q9NWQ8 432 aa16.32■□□□□ 0.2
COL16A1-214ENST00000488128 VSTM4Q8IW00 320 aa16.32■□□□□ 0.2
COL16A1-214ENST00000488128 RASSF4Q9H2L5 321 aa16.32■□□□□ 0.2
COL16A1-214ENST00000488128 ZSCAN12O43309 604 aa16.32■□□□□ 0.2
COL16A1-214ENST00000488128 WASHC4Q2M389 1173 aa16.32■□□□□ 0.2
COL16A1-214ENST00000488128 LONRF3Q496Y0 759 aa16.32■□□□□ 0.2
COL16A1-214ENST00000488128 LMBR1LQ6UX01 489 aa16.32■□□□□ 0.2
COL16A1-214ENST00000488128 ANKRD13DQ6ZTN6 518 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms