RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 CCDC183Q5T5S1 534 aa17.45■□□□□ 0.38
EPHA1-205ENST00000488068 ZSCAN16Q9H4T2 348 aaPredicted RBP17.45■□□□□ 0.38
EPHA1-205ENST00000488068 RTCBQ9Y3I0 505 aaKnown RBP17.45■□□□□ 0.38
EPHA1-205ENST00000488068 SALL1Q9NSC2 1324 aa17.45■□□□□ 0.38
EPHA1-205ENST00000488068 TIAM2Q8IVF5 1701 aa17.45■□□□□ 0.38
EPHA1-205ENST00000488068 GNPATO15228 680 aa17.45■□□□□ 0.38
EPHA1-205ENST00000488068 PRC1O43663 620 aa17.45■□□□□ 0.38
EPHA1-205ENST00000488068 ONECUT3O60422 494 aaPredicted RBP17.45■□□□□ 0.38
EPHA1-205ENST00000488068 DTNBO60941 627 aa17.45■□□□□ 0.38
EPHA1-205ENST00000488068 BCAMP50895 628 aa17.45■□□□□ 0.38
EPHA1-205ENST00000488068 NAA16Q6N069 864 aaPredicted RBP17.45■□□□□ 0.38
EPHA1-205ENST00000488068 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
EPHA1-205ENST00000488068 SCAND2PQ9GZW5 306 aaPredicted RBP17.44■□□□□ 0.38
EPHA1-205ENST00000488068 SNAP23O00161 211 aa17.44■□□□□ 0.38
EPHA1-205ENST00000488068 CTDNEP1O95476 244 aa17.44■□□□□ 0.38
EPHA1-205ENST00000488068 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
EPHA1-205ENST00000488068 TRDNQ13061 729 aa17.44■□□□□ 0.38
EPHA1-205ENST00000488068 MEX3CQ5U5Q3 659 aaKnown RBP17.44■□□□□ 0.38
EPHA1-205ENST00000488068 C3orf67Q6ZVT6 689 aa17.44■□□□□ 0.38
EPHA1-205ENST00000488068 MAGEB6Q8N7X4 407 aa17.44■□□□□ 0.38
EPHA1-205ENST00000488068 GNL3LQ9NVN8 582 aaKnown RBP17.44■□□□□ 0.38
EPHA1-205ENST00000488068 PTPDC1A2A3K4 754 aa17.44■□□□□ 0.38
EPHA1-205ENST00000488068 PATL2C9JE40 543 aaKnown RBP17.44■□□□□ 0.38
EPHA1-205ENST00000488068 GNAT2P19087 354 aa17.44■□□□□ 0.38
EPHA1-205ENST00000488068 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
EPHA1-205ENST00000488068 H3BQV1 296 aa17.43■□□□□ 0.38
EPHA1-205ENST00000488068 IFFO2Q5TF58 517 aa17.43■□□□□ 0.38
EPHA1-205ENST00000488068 NBPF3Q9H094 633 aa17.43■□□□□ 0.38
EPHA1-205ENST00000488068 ANTXR2P58335 489 aa17.43■□□□□ 0.38
EPHA1-205ENST00000488068 RESTQ13127 1097 aa17.43■□□□□ 0.38
EPHA1-205ENST00000488068 BICDL1Q6ZP65 573 aa17.43■□□□□ 0.38
EPHA1-205ENST00000488068 CHST3Q7LGC8 479 aa17.43■□□□□ 0.38
EPHA1-205ENST00000488068 FERMT3Q86UX7 667 aa17.43■□□□□ 0.38
EPHA1-205ENST00000488068 MAP7D2Q96T17 732 aa17.43■□□□□ 0.38
EPHA1-205ENST00000488068 ZKSCAN5Q9Y2L8 839 aa17.43■□□□□ 0.38
EPHA1-205ENST00000488068 DHX16O60231 1041 aaKnown RBP17.42■□□□□ 0.38
EPHA1-205ENST00000488068 APPP05067 770 aa17.42■□□□□ 0.38
EPHA1-205ENST00000488068 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
EPHA1-205ENST00000488068 FAM13BQ9NYF5 915 aa17.42■□□□□ 0.38
EPHA1-205ENST00000488068 MYH13Q9UKX3 1938 aa17.42■□□□□ 0.38
EPHA1-205ENST00000488068 TPTE2Q6XPS3 522 aa17.42■□□□□ 0.38
EPHA1-205ENST00000488068 NBPF5PQ86XG9 351 aaPredicted RBP17.42■□□□□ 0.38
EPHA1-205ENST00000488068 DDX11Q96FC9 970 aa17.42■□□□□ 0.38
EPHA1-205ENST00000488068 SRP68Q9UHB9 627 aaKnown RBP17.42■□□□□ 0.38
EPHA1-205ENST00000488068 MINPP1Q9UNW1 487 aa17.42■□□□□ 0.38
EPHA1-205ENST00000488068 CCT2P78371 535 aaKnown RBP17.41■□□□□ 0.38
EPHA1-205ENST00000488068 TSPY26PQ9H489 355 aa17.41■□□□□ 0.38
EPHA1-205ENST00000488068 AFF2P51816 1311 aa17.41■□□□□ 0.38
EPHA1-205ENST00000488068 MBD4O95243 580 aa17.41■□□□□ 0.38
EPHA1-205ENST00000488068 TTC6Q86TZ1 520 aa17.41■□□□□ 0.38
EPHA1-205ENST00000488068 TBC1D10CQ8IV04 446 aa17.41■□□□□ 0.38
EPHA1-205ENST00000488068 RGS22Q8NE09 1264 aa17.41■□□□□ 0.38
EPHA1-205ENST00000488068 UQCRHLA0A096LP55 91 aa17.41■□□□□ 0.38
EPHA1-205ENST00000488068 UQCRHP07919 91 aa17.41■□□□□ 0.38
EPHA1-205ENST00000488068 IFNL3Q8IZI9 196 aa17.41■□□□□ 0.38
EPHA1-205ENST00000488068 CERKQ8TCT0 537 aa17.41■□□□□ 0.38
EPHA1-205ENST00000488068 ARHGEF1Q92888 912 aaKnown RBP17.41■□□□□ 0.38
EPHA1-205ENST00000488068 TRPC5Q9UL62 973 aaPredicted RBP17.41■□□□□ 0.38
EPHA1-205ENST00000488068 CAVIN4Q5BKX8 364 aa17.4■□□□□ 0.38
EPHA1-205ENST00000488068 SEMA3EO15041 775 aa17.4■□□□□ 0.38
EPHA1-205ENST00000488068 CELF1Q92879 486 aaKnown RBP17.4■□□□□ 0.38
EPHA1-205ENST00000488068 TMEM87BQ96K49 555 aa17.4■□□□□ 0.38
EPHA1-205ENST00000488068 NAPBQ9H115 298 aa17.4■□□□□ 0.38
EPHA1-205ENST00000488068 LRP2BPQ9P2M1 347 aa17.4■□□□□ 0.38
EPHA1-205ENST00000488068 NAP1L2Q9ULW6 460 aaPredicted RBP17.4■□□□□ 0.38
EPHA1-205ENST00000488068 KLF18A0A0U1RQI7 1052 aa17.39■□□□□ 0.37
EPHA1-205ENST00000488068 ZBTB22O15209 634 aa17.39■□□□□ 0.37
EPHA1-205ENST00000488068 RPS8P62241 208 aaKnown RBP17.39■□□□□ 0.37
EPHA1-205ENST00000488068 ATL3Q6DD88 541 aa17.39■□□□□ 0.37
EPHA1-205ENST00000488068 SPATA32Q96LK8 384 aa17.39■□□□□ 0.37
EPHA1-205ENST00000488068 NACAP1Q9BZK3 213 aa17.39■□□□□ 0.37
EPHA1-205ENST00000488068 ANKRD2Q9GZV1 360 aa17.39■□□□□ 0.37
EPHA1-205ENST00000488068 NCOA5Q9HCD5 579 aaKnown RBP17.39■□□□□ 0.37
EPHA1-205ENST00000488068 EPB41L4AQ9HCS5 686 aaPredicted RBP17.39■□□□□ 0.37
EPHA1-205ENST00000488068 DENND2AQ9ULE3 1009 aa17.39■□□□□ 0.37
EPHA1-205ENST00000488068 PDS5AQ29RF7 1337 aaKnown RBP17.39■□□□□ 0.37
EPHA1-205ENST00000488068 CARMIL3Q8ND23 1372 aa17.39■□□□□ 0.37
EPHA1-205ENST00000488068 CFAP45Q9UL16 551 aa17.39■□□□□ 0.37
EPHA1-205ENST00000488068 ANGEL1Q9UNK9 670 aaKnown RBP17.39■□□□□ 0.37
EPHA1-205ENST00000488068 CACNA1SQ13698 1873 aa17.39■□□□□ 0.37
EPHA1-205ENST00000488068 BCL11BQ9C0K0 894 aaPredicted RBP17.38■□□□□ 0.37
EPHA1-205ENST00000488068 CNNM2Q9H8M5 875 aa17.38■□□□□ 0.37
EPHA1-205ENST00000488068 ARMT1Q9H993 441 aa17.38■□□□□ 0.37
EPHA1-205ENST00000488068 HPS5Q9UPZ3 1129 aa17.38■□□□□ 0.37
EPHA1-205ENST00000488068 GOLGA8BA8MQT2 603 aa17.38■□□□□ 0.37
EPHA1-205ENST00000488068 GSG1L2A8MUP6 293 aa17.38■□□□□ 0.37
EPHA1-205ENST00000488068 FAM182BQ5T319 152 aa17.38■□□□□ 0.37
EPHA1-205ENST00000488068 LEO1Q8WVC0 666 aaPredicted RBP17.38■□□□□ 0.37
EPHA1-205ENST00000488068 GPHNQ9NQX3 736 aaPredicted RBP17.38■□□□□ 0.37
EPHA1-205ENST00000488068 UBR3Q6ZT12 1888 aa17.38■□□□□ 0.37
EPHA1-205ENST00000488068 SH2B2O14492 632 aaPredicted RBP17.37■□□□□ 0.37
EPHA1-205ENST00000488068 ADRA2BP18089 450 aa17.37■□□□□ 0.37
EPHA1-205ENST00000488068 TRAPPC3LQ5T215 181 aa17.37■□□□□ 0.37
EPHA1-205ENST00000488068 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
EPHA1-205ENST00000488068 COL1A1P02452 1464 aaPredicted RBP17.37■□□□□ 0.37
EPHA1-205ENST00000488068 TNRC6CQ9HCJ0 1690 aaKnown RBP17.37■□□□□ 0.37
EPHA1-205ENST00000488068 RFC4P35249 363 aa17.37■□□□□ 0.37
EPHA1-205ENST00000488068 GYG1P46976 350 aa17.37■□□□□ 0.37
EPHA1-205ENST00000488068 FAM173BQ6P4H8 233 aa17.37■□□□□ 0.37
EPHA1-205ENST00000488068 SEPT12Q8IYM1 358 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms