RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 MAP7Q14244 749 aa5.36□□□□□ -1.55
R3HDM1-219ENST00000488035 PHLDB3Q6NSJ2 640 aa5.36□□□□□ -1.55
R3HDM1-219ENST00000488035 CDPF1Q6NVV7 123 aa5.36□□□□□ -1.55
R3HDM1-219ENST00000488035 TTC16Q8NEE8 873 aa5.36□□□□□ -1.55
R3HDM1-219ENST00000488035 BHLHE22Q8NFJ8 381 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-219ENST00000488035 SLC5A6Q9Y289 635 aa5.36□□□□□ -1.55
R3HDM1-219ENST00000488035 FAM170BA6NMN3 283 aa5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 SOX1O00570 391 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 DRD2P14416 443 aa5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 SOX4Q06945 474 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 PLCL1Q15111 1095 aa5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 XKR5Q6UX68 686 aa5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 KSR1Q8IVT5 923 aa5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 C2CD4AQ8NCU7 369 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 NUDT16Q96DE0 195 aaKnown RBP5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 LRRC4CQ9HCJ2 640 aa5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 CNTN3Q9P232 1028 aa5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 ZC3H7BQ9UGR2 993 aaKnown RBP5.35□□□□□ -1.55
R3HDM1-219ENST00000488035 NAA30Q147X3 362 aaPredicted RBP5.34□□□□□ -1.55
R3HDM1-219ENST00000488035 HP1BP3Q5SSJ5 553 aaPredicted RBP5.34□□□□□ -1.55
R3HDM1-219ENST00000488035 HGSNATQ68CP4 663 aa5.34□□□□□ -1.55
R3HDM1-219ENST00000488035 AEBP1Q8IUX7 1158 aa5.34□□□□□ -1.55
R3HDM1-219ENST00000488035 C1orf127Q8N9H9 656 aa5.34□□□□□ -1.55
R3HDM1-219ENST00000488035 CLP1Q92989 425 aaKnown RBP5.34□□□□□ -1.55
R3HDM1-219ENST00000488035 SLC38A3Q99624 504 aa5.34□□□□□ -1.55
R3HDM1-219ENST00000488035 MKNK1Q9BUB5 465 aa5.34□□□□□ -1.55
R3HDM1-219ENST00000488035 CXXC1Q9P0U4 656 aaPredicted RBP5.34□□□□□ -1.55
R3HDM1-219ENST00000488035 NCANO14594 1321 aa5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 ZBTB39O15060 712 aa5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 ZNF792Q3KQV3 632 aa5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 VN1R5Q7Z5H4 357 aa5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 ATG4DQ86TL0 474 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 WFDC3Q8IUB2 231 aa5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 BCL7CQ8WUZ0 217 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 GATA6Q92908 595 aa5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 NXPE3Q969Y0 559 aa5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 MISP3Q96FF7 219 aa5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 OSMRQ99650 979 aa5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 ZFYVE1Q9HBF4 777 aa5.33□□□□□ -1.56
R3HDM1-219ENST00000488035 DLGAP3O95886 979 aa5.32□□□□□ -1.56
R3HDM1-219ENST00000488035 EDN3P14138 238 aa5.32□□□□□ -1.56
R3HDM1-219ENST00000488035 ACPPP15309 386 aa5.32□□□□□ -1.56
R3HDM1-219ENST00000488035 SSFA2P28290 1259 aa5.32□□□□□ -1.56
R3HDM1-219ENST00000488035 CAPN12Q6ZSI9 719 aa5.32□□□□□ -1.56
R3HDM1-219ENST00000488035 TMEM40Q8WWA1 233 aa5.32□□□□□ -1.56
R3HDM1-219ENST00000488035 HHIPQ96QV1 700 aa5.32□□□□□ -1.56
R3HDM1-219ENST00000488035 PRRG2O14669 202 aa5.31□□□□□ -1.56
R3HDM1-219ENST00000488035 BRD1O95696 1058 aa5.31□□□□□ -1.56
R3HDM1-219ENST00000488035 NFICP08651 508 aa5.31□□□□□ -1.56
R3HDM1-219ENST00000488035 ADH5P11766 374 aa5.31□□□□□ -1.56
R3HDM1-219ENST00000488035 ATP2B4P23634 1241 aa5.31□□□□□ -1.56
R3HDM1-219ENST00000488035 GSTM4Q03013 218 aa5.31□□□□□ -1.56
R3HDM1-219ENST00000488035 ZNF765Q7L2R6 523 aa5.31□□□□□ -1.56
R3HDM1-219ENST00000488035 RAPGEFL1Q9UHV5 662 aa5.31□□□□□ -1.56
R3HDM1-219ENST00000488035 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.3□□□□□ -1.56
R3HDM1-219ENST00000488035 TRPA1O75762 1119 aa5.3□□□□□ -1.56
R3HDM1-219ENST00000488035 ESRRAP11474 423 aaPredicted RBP5.3□□□□□ -1.56
R3HDM1-219ENST00000488035 MESP2Q0VG99 397 aa5.3□□□□□ -1.56
R3HDM1-219ENST00000488035 FAM168AQ92567 244 aa5.3□□□□□ -1.56
R3HDM1-219ENST00000488035 ZKSCAN3Q9BRR0 538 aa5.3□□□□□ -1.56
R3HDM1-219ENST00000488035 ACTL7BQ9Y614 415 aa5.3□□□□□ -1.56
R3HDM1-219ENST00000488035 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.3□□□□□ -1.56
R3HDM1-219ENST00000488035 RAB6AP20340 208 aa5.29□□□□□ -1.56
R3HDM1-219ENST00000488035 CYP27C1Q4G0S4 372 aa5.29□□□□□ -1.56
R3HDM1-219ENST00000488035 OGFOD3Q6PK18 319 aa5.29□□□□□ -1.56
R3HDM1-219ENST00000488035 GLIS3Q8NEA6 775 aa5.29□□□□□ -1.56
R3HDM1-219ENST00000488035 ASAP3Q8TDY4 903 aa5.29□□□□□ -1.56
R3HDM1-219ENST00000488035 BHLHE41Q9C0J9 482 aaPredicted RBP5.29□□□□□ -1.56
R3HDM1-219ENST00000488035 SEMA6CQ9H3T2 930 aa5.29□□□□□ -1.56
R3HDM1-219ENST00000488035 CYP11A1P05108 521 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 SERPINB4P48594 390 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 DNM1Q05193 864 aaKnown RBP5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 PDE4CQ08493 712 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 C8orf34Q49A92 452 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 LILRA6Q6PI73 481 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 DYMQ7RTS9 669 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 SPRED2Q7Z698 418 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 TXNDC2Q86VQ3 553 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 EDEM1Q92611 657 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 CHRDQ9H2X0 955 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 ACSS3Q9H6R3 686 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 RC3H2Q9HBD1 1191 aaKnown RBP5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 RAD18Q9NS91 495 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 SEPT3Q9UH03 358 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 IVNS1ABPQ9Y6Y0 642 aa5.28□□□□□ -1.56
R3HDM1-219ENST00000488035 FUT4P22083 530 aa5.27□□□□□ -1.57
R3HDM1-219ENST00000488035 ZNF574Q6ZN55 896 aaPredicted RBP5.27□□□□□ -1.57
R3HDM1-219ENST00000488035 ATCAYQ86WG3 371 aa5.27□□□□□ -1.57
R3HDM1-219ENST00000488035 C1QL4Q86Z23 238 aa5.27□□□□□ -1.57
R3HDM1-219ENST00000488035 SIAH1Q8IUQ4 282 aa5.27□□□□□ -1.57
R3HDM1-219ENST00000488035 DDX54Q8TDD1 881 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-219ENST00000488035 FAM84AQ96KN4 292 aa5.27□□□□□ -1.57
R3HDM1-219ENST00000488035 PHACTR2O75167 634 aa5.26□□□□□ -1.57
R3HDM1-219ENST00000488035 PDGFAP04085 211 aa5.26□□□□□ -1.57
R3HDM1-219ENST00000488035 MAOBP27338 520 aa5.26□□□□□ -1.57
R3HDM1-219ENST00000488035 MZF1P28698 734 aaPredicted RBP5.26□□□□□ -1.57
R3HDM1-219ENST00000488035 KCNA1Q09470 495 aa5.26□□□□□ -1.57
R3HDM1-219ENST00000488035 PI4K2BQ8TCG2 481 aa5.26□□□□□ -1.57
R3HDM1-219ENST00000488035 NETO1Q8TDF5 533 aa5.26□□□□□ -1.57
R3HDM1-219ENST00000488035 NRSN2Q9GZP1 204 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms